RNA–Protein interactions for RNA: ENST00000350721.8

ATR-201, Transcript of ATR serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATR, Length 8,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-201ENST00000350721 DNAH3Q8TD57 4116 aa3.47□□□□□ -1.85
ATR-201ENST00000350721 MT1HL1P0DM35 61 aa3.46□□□□□ -1.85
ATR-201ENST00000350721 CMYA5Q8N3K9 4069 aa3.46□□□□□ -1.86
ATR-201ENST00000350721 DNAH2Q9P225 4427 aa3.46□□□□□ -1.86
ATR-201ENST00000350721 DNAH10Q8IVF4 4471 aa3.45□□□□□ -1.86
ATR-201ENST00000350721 DNAH9Q9NYC9 4486 aa3.44□□□□□ -1.86
ATR-201ENST00000350721 VPS13BQ7Z7G8 4022 aa3.43□□□□□ -1.86
ATR-201ENST00000350721 KMT2AQ03164 3969 aa3.42□□□□□ -1.86
ATR-201ENST00000350721 PLECQ15149 4684 aaKnown RBP3.42□□□□□ -1.86
ATR-201ENST00000350721 VPS13DQ5THJ4 4388 aa3.42□□□□□ -1.86
ATR-201ENST00000350721 DNAH11Q96DT5 4516 aa3.41□□□□□ -1.86
ATR-201ENST00000350721 DNAH7Q8WXX0 4024 aa3.4□□□□□ -1.86
ATR-201ENST00000350721 PRKDCP78527 4128 aaKnown RBP3.39□□□□□ -1.87
ATR-201ENST00000350721 KRTAP10-10P60014 251 aa3.38□□□□□ -1.87
ATR-201ENST00000350721 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
ATR-201ENST00000350721 DNAH17Q9UFH2 4485 aa3.35□□□□□ -1.87
ATR-201ENST00000350721 STARD9Q9P2P6 4700 aa3.33□□□□□ -1.88
ATR-201ENST00000350721 DNAH5Q8TE73 4624 aa3.33□□□□□ -1.88
ATR-201ENST00000350721 FRAS1Q86XX4 4008 aa3.3□□□□□ -1.88
ATR-201ENST00000350721 DYNC2H1Q8NCM8 4307 aaKnown RBP3.29□□□□□ -1.88
ATR-201ENST00000350721 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
ATR-201ENST00000350721 LRP1BQ9NZR2 4599 aa3.23□□□□□ -1.89
ATR-201ENST00000350721 KRTAP10-12P60413 245 aa3.2□□□□□ -1.9
ATR-201ENST00000350721 LORP23490 312 aaPredicted RBP3.2□□□□□ -1.9
ATR-201ENST00000350721 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
ATR-201ENST00000350721 MYCBP2O75592 4640 aa3.19□□□□□ -1.9
ATR-201ENST00000350721 RYR1P21817 5038 aa3.18□□□□□ -1.9
ATR-201ENST00000350721 FAT2Q9NYQ8 4349 aa3.17□□□□□ -1.9
ATR-201ENST00000350721 DYNC1H1Q14204 4646 aaKnown RBP3.16□□□□□ -1.9
ATR-201ENST00000350721 FAT1Q14517 4588 aa3.16□□□□□ -1.9
ATR-201ENST00000350721 SPRR2GQ9BYE4 73 aa3.16□□□□□ -1.9
ATR-201ENST00000350721 PKHD1P08F94 4074 aa3.14□□□□□ -1.91
ATR-201ENST00000350721 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
ATR-201ENST00000350721 DNHD1Q96M86 4753 aa3.13□□□□□ -1.91
ATR-201ENST00000350721 KRTAP8-1Q8IUC2 63 aa3.13□□□□□ -1.91
ATR-201ENST00000350721 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
ATR-201ENST00000350721 KRTAP19-4Q3LI73 84 aa3.11□□□□□ -1.91
ATR-201ENST00000350721 SACSQ9NZJ4 4579 aa3.09□□□□□ -1.91
ATR-201ENST00000350721 APOBP04114 4563 aaKnown RBP3.07□□□□□ -1.92
ATR-201ENST00000350721 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
ATR-201ENST00000350721 LRP1Q07954 4544 aaKnown RBP3.04□□□□□ -1.92
ATR-201ENST00000350721 KRTAP4-5Q9BYR2 181 aa3.03□□□□□ -1.93
ATR-201ENST00000350721 FAT3Q8TDW7 4589 aa3.02□□□□□ -1.93
ATR-201ENST00000350721 FLGP20930 4061 aaPredicted RBP3.01□□□□□ -1.93
ATR-201ENST00000350721 LRP2P98164 4655 aa2.99□□□□□ -1.93
ATR-201ENST00000350721 PKD1P98161 4303 aa2.96□□□□□ -1.94
ATR-201ENST00000350721 KRTAP19-1Q8IUB9 90 aa2.95□□□□□ -1.94
ATR-201ENST00000350721 KIAA1109Q2LD37 5005 aa2.95□□□□□ -1.94
ATR-201ENST00000350721 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
ATR-201ENST00000350721 MT2AP02795 61 aa2.92□□□□□ -1.94
ATR-201ENST00000350721 HSPG2P98160 4391 aa2.9□□□□□ -1.95
ATR-201ENST00000350721 MT1HP80294 61 aa2.88□□□□□ -1.95
ATR-201ENST00000350721 PKHD1L1Q86WI1 4243 aa2.88□□□□□ -1.95
ATR-201ENST00000350721 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
ATR-201ENST00000350721 MT1FP04733 61 aa2.85□□□□□ -1.95
ATR-201ENST00000350721 RYR3Q15413 4870 aa2.85□□□□□ -1.95
ATR-201ENST00000350721 RYR2Q92736 4967 aa2.83□□□□□ -1.96
ATR-201ENST00000350721 KRTAP19-2Q3LHN2 52 aa2.82□□□□□ -1.96
ATR-201ENST00000350721 TNXBP22105 4242 aa2.81□□□□□ -1.96
ATR-201ENST00000350721 MT1XP80297 61 aa2.79□□□□□ -1.96
ATR-201ENST00000350721 MUC17Q685J3 4493 aa2.78□□□□□ -1.96
ATR-201ENST00000350721 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
ATR-201ENST00000350721 HYDINQ4G0P3 5121 aa2.77□□□□□ -1.97
ATR-201ENST00000350721 KRTAP17-1Q9BYP8 105 aa2.77□□□□□ -1.97
ATR-201ENST00000350721 KMT2CQ8NEZ4 4911 aaKnown RBP2.77□□□□□ -1.97
ATR-201ENST00000350721 KRTAP10-5P60370 271 aa2.77□□□□□ -1.97
ATR-201ENST00000350721 MT1BP07438 61 aa2.74□□□□□ -1.97
ATR-201ENST00000350721 LCE2CQ5TA81 110 aa2.74□□□□□ -1.97
ATR-201ENST00000350721 KRTAP9-8Q9BYQ0 159 aa2.74□□□□□ -1.97
ATR-201ENST00000350721 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
ATR-201ENST00000350721 HERC2O95714 4834 aa2.68□□□□□ -1.98
ATR-201ENST00000350721 KRTAP9-3Q9BYQ3 159 aa2.64□□□□□ -1.99
ATR-201ENST00000350721 PCLOQ9Y6V0 5065 aa2.62□□□□□ -1.99
ATR-201ENST00000350721 CRCT1Q9UGL9 99 aa2.6□□□□□ -1.99
ATR-201ENST00000350721 LPAP08519 4548 aa2.58□□□□□ -2
ATR-201ENST00000350721 KRTAP12-4P60329 112 aa2.58□□□□□ -2
ATR-201ENST00000350721 MT1LQ93083 61 aa2.57□□□□□ -2
ATR-201ENST00000350721 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
ATR-201ENST00000350721 MT1GP13640 62 aa2.55□□□□□ -2
ATR-201ENST00000350721 KRTAP2-3P0C7H8 128 aa2.53□□□□□ -2
ATR-201ENST00000350721 KRTAP2-4Q9BYR9 128 aa2.53□□□□□ -2
ATR-201ENST00000350721 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2
ATR-201ENST00000350721 HERC1Q15751 4861 aa2.49□□□□□ -2.01
ATR-201ENST00000350721 MT1EP04732 61 aa2.49□□□□□ -2.01
ATR-201ENST00000350721 HMCN2Q8NDA2 5059 aa2.47□□□□□ -2.01
ATR-201ENST00000350721 UBR4Q5T4S7 5183 aa2.47□□□□□ -2.01
ATR-201ENST00000350721 KRTAP4-8A0A0G2JLE6 195 aa2.47□□□□□ -2.01
ATR-201ENST00000350721 KRTAP4-8Q9BYQ9 185 aa2.47□□□□□ -2.01
ATR-201ENST00000350721 BIRC6Q9NR09 4857 aa2.47□□□□□ -2.01
ATR-201ENST00000350721 MUC2Q02817 5179 aa2.45□□□□□ -2.02
ATR-201ENST00000350721 LCE2BO14633 110 aa2.45□□□□□ -2.02
ATR-201ENST00000350721 KRTAP19-7Q3SYF9 63 aa2.44□□□□□ -2.02
ATR-201ENST00000350721 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
ATR-201ENST00000350721 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
ATR-201ENST00000350721 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
ATR-201ENST00000350721 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
ATR-201ENST00000350721 ABCA13Q86UQ4 5058 aa2.42□□□□□ -2.02
ATR-201ENST00000350721 EPPK1P58107 5090 aaKnown RBP2.4□□□□□ -2.02
ATR-201ENST00000350721 LCE3BQ5TA77 95 aa2.38□□□□□ -2.03
ATR-201ENST00000350721 RNF213Q63HN8 5207 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms