RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 TNP1P09430 55 aa2.74□□□□□ -1.97
RFC1-201ENST00000349703 M0R2T5 61 aa2.73□□□□□ -1.97
RFC1-201ENST00000349703 Q5VSD8 79 aa2.73□□□□□ -1.97
RFC1-201ENST00000349703 KRTAP9-6A0A140TA67 174 aa2.72□□□□□ -1.97
RFC1-201ENST00000349703 KRTAP9-7A8MTY7 169 aa2.72□□□□□ -1.97
RFC1-201ENST00000349703 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
RFC1-201ENST00000349703 DNAH3Q8TD57 4116 aa2.72□□□□□ -1.97
RFC1-201ENST00000349703 DNAH10Q8IVF4 4471 aa2.69□□□□□ -1.98
RFC1-201ENST00000349703 DNAH17Q9UFH2 4485 aa2.68□□□□□ -1.98
RFC1-201ENST00000349703 DNAH8Q96JB1 4490 aa2.68□□□□□ -1.98
RFC1-201ENST00000349703 KRTAP9-4Q9BYQ2 154 aa2.65□□□□□ -1.99
RFC1-201ENST00000349703 FBN1P35555 2871 aaKnown RBP2.64□□□□□ -1.99
RFC1-201ENST00000349703 DYNC2H1Q8NCM8 4307 aaKnown RBP2.64□□□□□ -1.99
RFC1-201ENST00000349703 COL7A1Q02388 2944 aa2.64□□□□□ -1.99
RFC1-201ENST00000349703 VPS13DQ5THJ4 4388 aa2.63□□□□□ -1.99
RFC1-201ENST00000349703 MEGF8Q7Z7M0 2845 aa2.62□□□□□ -1.99
RFC1-201ENST00000349703 DNAH9Q9NYC9 4486 aa2.61□□□□□ -1.99
RFC1-201ENST00000349703 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
RFC1-201ENST00000349703 A0A1B0GVY2 172 aa2.61□□□□□ -1.99
RFC1-201ENST00000349703 KRTAP21-3Q3LHN1 58 aa2.6□□□□□ -1.99
RFC1-201ENST00000349703 DNAH11Q96DT5 4516 aa2.59□□□□□ -1.99
RFC1-201ENST00000349703 PLECQ15149 4684 aaKnown RBP2.59□□□□□ -1.99
RFC1-201ENST00000349703 LCE5AQ5TCM9 118 aa2.59□□□□□ -1.99
RFC1-201ENST00000349703 DNAH2Q9P225 4427 aa2.59□□□□□ -1.99
RFC1-201ENST00000349703 HECTD4Q9Y4D8 3996 aa2.59□□□□□ -1.99
RFC1-201ENST00000349703 FBN3Q75N90 2809 aa2.58□□□□□ -2
RFC1-201ENST00000349703 CMYA5Q8N3K9 4069 aa2.57□□□□□ -2
RFC1-201ENST00000349703 KRTAP10-4P60372 401 aaPredicted RBP2.57□□□□□ -2
RFC1-201ENST00000349703 LCE1DQ5T752 114 aa2.57□□□□□ -2
RFC1-201ENST00000349703 KRTAP19-1Q8IUB9 90 aa2.55□□□□□ -2
RFC1-201ENST00000349703 DNAH6Q9C0G6 4158 aa2.53□□□□□ -2
RFC1-201ENST00000349703 KRTAP10-12P60413 245 aa2.52□□□□□ -2.01
RFC1-201ENST00000349703 FRAS1Q86XX4 4008 aa2.52□□□□□ -2.01
RFC1-201ENST00000349703 SACSQ9NZJ4 4579 aa2.51□□□□□ -2.01
RFC1-201ENST00000349703 DNAH7Q8WXX0 4024 aa2.48□□□□□ -2.01
RFC1-201ENST00000349703 KRTAP9-3Q9BYQ3 159 aa2.48□□□□□ -2.01
RFC1-201ENST00000349703 STARD9Q9P2P6 4700 aa2.47□□□□□ -2.01
RFC1-201ENST00000349703 PRKDCP78527 4128 aaKnown RBP2.47□□□□□ -2.01
RFC1-201ENST00000349703 DNAH5Q8TE73 4624 aa2.47□□□□□ -2.01
RFC1-201ENST00000349703 LRP1BQ9NZR2 4599 aa2.46□□□□□ -2.02
RFC1-201ENST00000349703 KRTAP4-8Q9BYQ9 185 aa2.44□□□□□ -2.02
RFC1-201ENST00000349703 MT1HL1P0DM35 61 aa2.43□□□□□ -2.02
RFC1-201ENST00000349703 VPS13BQ7Z7G8 4022 aa2.42□□□□□ -2.02
RFC1-201ENST00000349703 LOC100996750A0A140TA64 210 aa2.42□□□□□ -2.02
RFC1-201ENST00000349703 KRTAP4-6Q9BYQ5 205 aa2.42□□□□□ -2.02
RFC1-201ENST00000349703 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
RFC1-201ENST00000349703 FAT2Q9NYQ8 4349 aa2.41□□□□□ -2.02
RFC1-201ENST00000349703 KRTAP9-8Q9BYQ0 159 aa2.4□□□□□ -2.03
RFC1-201ENST00000349703 KMT2AQ03164 3969 aa2.38□□□□□ -2.03
RFC1-201ENST00000349703 PKHD1L1Q86WI1 4243 aa2.38□□□□□ -2.03
RFC1-201ENST00000349703 KRTAP9-2Q9BYQ4 174 aa2.38□□□□□ -2.03
RFC1-201ENST00000349703 DYNC1H1Q14204 4646 aaKnown RBP2.37□□□□□ -2.03
RFC1-201ENST00000349703 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
RFC1-201ENST00000349703 APOBP04114 4563 aaKnown RBP2.35□□□□□ -2.03
RFC1-201ENST00000349703 KRTAP2-2Q9BYT5 123 aa2.34□□□□□ -2.03
RFC1-201ENST00000349703 FAT3Q8TDW7 4589 aa2.34□□□□□ -2.04
RFC1-201ENST00000349703 LCE3AQ5TA76 89 aa2.33□□□□□ -2.04
RFC1-201ENST00000349703 FAT1Q14517 4588 aa2.33□□□□□ -2.04
RFC1-201ENST00000349703 PKHD1P08F94 4074 aa2.31□□□□□ -2.04
RFC1-201ENST00000349703 LRP1Q07954 4544 aaKnown RBP2.31□□□□□ -2.04
RFC1-201ENST00000349703 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
RFC1-201ENST00000349703 PKD1P98161 4303 aa2.31□□□□□ -2.04
RFC1-201ENST00000349703 DNHD1Q96M86 4753 aa2.31□□□□□ -2.04
RFC1-201ENST00000349703 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
RFC1-201ENST00000349703 MYCBP2O75592 4640 aa2.29□□□□□ -2.04
RFC1-201ENST00000349703 LCE1AQ5T7P2 110 aa2.27□□□□□ -2.05
RFC1-201ENST00000349703 TNXBP22105 4242 aa2.26□□□□□ -2.05
RFC1-201ENST00000349703 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.25□□□□□ -2.05
RFC1-201ENST00000349703 KRTAP8-1Q8IUC2 63 aa2.25□□□□□ -2.05
RFC1-201ENST00000349703 KRTAP4-8A0A0G2JLE6 195 aa2.24□□□□□ -2.05
RFC1-201ENST00000349703 SPRR2GQ9BYE4 73 aa2.24□□□□□ -2.05
RFC1-201ENST00000349703 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
RFC1-201ENST00000349703 KRTAP4-1Q9BYQ7 146 aa2.22□□□□□ -2.05
RFC1-201ENST00000349703 HSPG2P98160 4391 aa2.22□□□□□ -2.05
RFC1-201ENST00000349703 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
RFC1-201ENST00000349703 KRTAP9-9Q9BYP9 154 aa2.21□□□□□ -2.06
RFC1-201ENST00000349703 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
RFC1-201ENST00000349703 KRTAP10-5P60370 271 aa2.2□□□□□ -2.06
RFC1-201ENST00000349703 HYDINQ4G0P3 5121 aa2.2□□□□□ -2.06
RFC1-201ENST00000349703 KRTAP4-11Q9BYQ6 195 aa2.19□□□□□ -2.06
RFC1-201ENST00000349703 KRTAP4-9Q9BYQ8 210 aa2.18□□□□□ -2.06
RFC1-201ENST00000349703 KRTAP4-7Q9BYR0 210 aa2.13□□□□□ -2.07
RFC1-201ENST00000349703 RYR2Q92736 4967 aa2.13□□□□□ -2.07
RFC1-201ENST00000349703 KMT2CQ8NEZ4 4911 aaKnown RBP2.11□□□□□ -2.07
RFC1-201ENST00000349703 KRTAP4-5Q9BYR2 181 aa2.11□□□□□ -2.07
RFC1-201ENST00000349703 HERC1Q15751 4861 aa2.11□□□□□ -2.07
RFC1-201ENST00000349703 RYR1P21817 5038 aa2.1□□□□□ -2.07
RFC1-201ENST00000349703 KRTAP19-8Q3LI54 63 aa2.1□□□□□ -2.07
RFC1-201ENST00000349703 KRTAP19-2Q3LHN2 52 aa2.09□□□□□ -2.07
RFC1-201ENST00000349703 RYR3Q15413 4870 aa2.08□□□□□ -2.08
RFC1-201ENST00000349703 MT2AP02795 61 aa2.07□□□□□ -2.08
RFC1-201ENST00000349703 LRP2P98164 4655 aa2.06□□□□□ -2.08
RFC1-201ENST00000349703 MT1HP80294 61 aa2.05□□□□□ -2.08
RFC1-201ENST00000349703 MT1FP04733 61 aa2.05□□□□□ -2.08
RFC1-201ENST00000349703 KRTAP19-5Q3LI72 72 aa2.04□□□□□ -2.08
RFC1-201ENST00000349703 MUC17Q685J3 4493 aa2.04□□□□□ -2.08
RFC1-201ENST00000349703 MT1XP80297 61 aa2.04□□□□□ -2.08
RFC1-201ENST00000349703 FLGP20930 4061 aaPredicted RBP2.03□□□□□ -2.09
RFC1-201ENST00000349703 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
RFC1-201ENST00000349703 MT1BP07438 61 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms