RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 DNAH9Q9NYC9 4486 aa5.21□□□□□ -1.58
TRAF3-201ENST00000347662 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.58
TRAF3-201ENST00000347662 ALMS1Q8TCU4 4167 aa5.14□□□□□ -1.59
TRAF3-201ENST00000347662 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
TRAF3-201ENST00000347662 DNHD1Q96M86 4753 aa5.07□□□□□ -1.6
TRAF3-201ENST00000347662 DNAH1Q9P2D7 4330 aa5.06□□□□□ -1.6
TRAF3-201ENST00000347662 KRTAP3-3Q9BYR6 98 aa5.05□□□□□ -1.6
TRAF3-201ENST00000347662 PRKDCP78527 4128 aaKnown RBP5.05□□□□□ -1.6
TRAF3-201ENST00000347662 LYSTQ99698 3801 aa5.04□□□□□ -1.6
TRAF3-201ENST00000347662 KMT2AQ03164 3969 aa5.02□□□□□ -1.61
TRAF3-201ENST00000347662 DNAH5Q8TE73 4624 aa5.01□□□□□ -1.61
TRAF3-201ENST00000347662 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
TRAF3-201ENST00000347662 DNAH11Q96DT5 4516 aa4.98□□□□□ -1.61
TRAF3-201ENST00000347662 PLECQ15149 4684 aaKnown RBP4.98□□□□□ -1.61
TRAF3-201ENST00000347662 VPS13BQ7Z7G8 4022 aa4.97□□□□□ -1.61
TRAF3-201ENST00000347662 DNAH10Q8IVF4 4471 aa4.96□□□□□ -1.62
TRAF3-201ENST00000347662 KRTAP10-7P60409 375 aaPredicted RBP4.95□□□□□ -1.62
TRAF3-201ENST00000347662 DNAH2Q9P225 4427 aa4.9□□□□□ -1.63
TRAF3-201ENST00000347662 FAT1Q14517 4588 aa4.88□□□□□ -1.63
TRAF3-201ENST00000347662 KRTAP4-1Q9BYQ7 146 aa4.86□□□□□ -1.63
TRAF3-201ENST00000347662 STARD9Q9P2P6 4700 aa4.85□□□□□ -1.63
TRAF3-201ENST00000347662 ANK2Q01484 3957 aa4.84□□□□□ -1.63
TRAF3-201ENST00000347662 LRP1BQ9NZR2 4599 aa4.83□□□□□ -1.64
TRAF3-201ENST00000347662 FAT2Q9NYQ8 4349 aa4.82□□□□□ -1.64
TRAF3-201ENST00000347662 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
TRAF3-201ENST00000347662 DNAH17Q9UFH2 4485 aa4.8□□□□□ -1.64
TRAF3-201ENST00000347662 VPS13DQ5THJ4 4388 aa4.8□□□□□ -1.64
TRAF3-201ENST00000347662 DNAH8Q96JB1 4490 aa4.79□□□□□ -1.64
TRAF3-201ENST00000347662 MT1HP80294 61 aa4.79□□□□□ -1.64
TRAF3-201ENST00000347662 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
TRAF3-201ENST00000347662 FRAS1Q86XX4 4008 aa4.74□□□□□ -1.65
TRAF3-201ENST00000347662 DNAH3Q8TD57 4116 aa4.73□□□□□ -1.65
TRAF3-201ENST00000347662 RYR1P21817 5038 aa4.72□□□□□ -1.65
TRAF3-201ENST00000347662 FAT3Q8TDW7 4589 aa4.7□□□□□ -1.66
TRAF3-201ENST00000347662 DNAH6Q9C0G6 4158 aa4.69□□□□□ -1.66
TRAF3-201ENST00000347662 DYNC2H1Q8NCM8 4307 aaKnown RBP4.69□□□□□ -1.66
TRAF3-201ENST00000347662 DYNC1H1Q14204 4646 aaKnown RBP4.68□□□□□ -1.66
TRAF3-201ENST00000347662 MT2AP02795 61 aa4.67□□□□□ -1.66
TRAF3-201ENST00000347662 CMYA5Q8N3K9 4069 aa4.66□□□□□ -1.66
TRAF3-201ENST00000347662 MYCBP2O75592 4640 aa4.65□□□□□ -1.66
TRAF3-201ENST00000347662 SACSQ9NZJ4 4579 aa4.65□□□□□ -1.67
TRAF3-201ENST00000347662 MT1FP04733 61 aa4.6□□□□□ -1.67
TRAF3-201ENST00000347662 DNAH7Q8WXX0 4024 aa4.57□□□□□ -1.68
TRAF3-201ENST00000347662 SPRR2EP22531 72 aa4.55□□□□□ -1.68
TRAF3-201ENST00000347662 SPRR2BP35325 72 aa4.55□□□□□ -1.68
TRAF3-201ENST00000347662 SPRR2AP35326 72 aa4.55□□□□□ -1.68
TRAF3-201ENST00000347662 KRTAP17-1Q9BYP8 105 aa4.54□□□□□ -1.68
TRAF3-201ENST00000347662 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
TRAF3-201ENST00000347662 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
TRAF3-201ENST00000347662 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
TRAF3-201ENST00000347662 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
TRAF3-201ENST00000347662 SPRR2GQ9BYE4 73 aa4.51□□□□□ -1.69
TRAF3-201ENST00000347662 HECTD4Q9Y4D8 3996 aa4.51□□□□□ -1.69
TRAF3-201ENST00000347662 APOBP04114 4563 aaKnown RBP4.49□□□□□ -1.69
TRAF3-201ENST00000347662 RYR3Q15413 4870 aa4.48□□□□□ -1.69
TRAF3-201ENST00000347662 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
TRAF3-201ENST00000347662 SPRR2DP22532 72 aa4.4□□□□□ -1.71
TRAF3-201ENST00000347662 KIAA1109Q2LD37 5005 aa4.38□□□□□ -1.71
TRAF3-201ENST00000347662 HSPG2P98160 4391 aa4.35□□□□□ -1.71
TRAF3-201ENST00000347662 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
TRAF3-201ENST00000347662 LRP2P98164 4655 aa4.32□□□□□ -1.72
TRAF3-201ENST00000347662 LCE2BO14633 110 aa4.31□□□□□ -1.72
TRAF3-201ENST00000347662 LPAP08519 4548 aa4.28□□□□□ -1.72
TRAF3-201ENST00000347662 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
TRAF3-201ENST00000347662 MT1GP13640 62 aa4.24□□□□□ -1.73
TRAF3-201ENST00000347662 HERC2O95714 4834 aa4.23□□□□□ -1.73
TRAF3-201ENST00000347662 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
TRAF3-201ENST00000347662 PKD1P98161 4303 aa4.18□□□□□ -1.74
TRAF3-201ENST00000347662 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
TRAF3-201ENST00000347662 HYDINQ4G0P3 5121 aa4.16□□□□□ -1.74
TRAF3-201ENST00000347662 PKHD1L1Q86WI1 4243 aa4.15□□□□□ -1.75
TRAF3-201ENST00000347662 LCE2CQ5TA81 110 aa4.14□□□□□ -1.75
TRAF3-201ENST00000347662 KRTAP4-8A0A0G2JLE6 195 aa4.14□□□□□ -1.75
TRAF3-201ENST00000347662 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
TRAF3-201ENST00000347662 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
TRAF3-201ENST00000347662 MT1XP80297 61 aa4.12□□□□□ -1.75
TRAF3-201ENST00000347662 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
TRAF3-201ENST00000347662 MT1BP07438 61 aa4.1□□□□□ -1.75
TRAF3-201ENST00000347662 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
TRAF3-201ENST00000347662 LCE2DQ5TA82 110 aaPredicted RBP4.08□□□□□ -1.76
TRAF3-201ENST00000347662 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
TRAF3-201ENST00000347662 PCLOQ9Y6V0 5065 aa4.05□□□□□ -1.76
TRAF3-201ENST00000347662 KRTAP19-4Q3LI73 84 aa4.05□□□□□ -1.76
TRAF3-201ENST00000347662 KMT2CQ8NEZ4 4911 aaKnown RBP4.04□□□□□ -1.76
TRAF3-201ENST00000347662 RYR2Q92736 4967 aa4.03□□□□□ -1.76
TRAF3-201ENST00000347662 FSIP2Q5CZC0 6907 aa4.02□□□□□ -1.77
TRAF3-201ENST00000347662 MT4P47944 62 aa4□□□□□ -1.77
TRAF3-201ENST00000347662 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
TRAF3-201ENST00000347662 TNXBP22105 4242 aa3.99□□□□□ -1.77
TRAF3-201ENST00000347662 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.77
TRAF3-201ENST00000347662 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
TRAF3-201ENST00000347662 BIRC6Q9NR09 4857 aa3.94□□□□□ -1.78
TRAF3-201ENST00000347662 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
TRAF3-201ENST00000347662 HERC1Q15751 4861 aa3.86□□□□□ -1.79
TRAF3-201ENST00000347662 KRTAP19-2Q3LHN2 52 aa3.85□□□□□ -1.79
TRAF3-201ENST00000347662 PRM1P04553 51 aa3.83□□□□□ -1.8
TRAF3-201ENST00000347662 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
TRAF3-201ENST00000347662 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
TRAF3-201ENST00000347662 EPPK1P58107 5090 aaKnown RBP3.81□□□□□ -1.8
TRAF3-201ENST00000347662 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms