RNA–Protein interactions for RNA: ENST00000346618.7

E2F3-201, Transcript of E2F transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene E2F3, Length 4,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3-201ENST00000346618 KRTAP10-4P60372 401 aaPredicted RBP6.08□□□□□ -1.44
E2F3-201ENST00000346618 MT1HL1P0DM35 61 aa6.07□□□□□ -1.44
E2F3-201ENST00000346618 LCE2CQ5TA81 110 aa6.04□□□□□ -1.44
E2F3-201ENST00000346618 ANK2Q01484 3957 aa6.02□□□□□ -1.45
E2F3-201ENST00000346618 SPRR5A0A1B0GTR4 108 aa6.01□□□□□ -1.45
E2F3-201ENST00000346618 TRRAPQ9Y4A5 3859 aa5.97□□□□□ -1.45
E2F3-201ENST00000346618 DNAH3Q8TD57 4116 aa5.96□□□□□ -1.46
E2F3-201ENST00000346618 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
E2F3-201ENST00000346618 CSMD3Q7Z407 3707 aa5.93□□□□□ -1.46
E2F3-201ENST00000346618 CMYA5Q8N3K9 4069 aa5.91□□□□□ -1.46
E2F3-201ENST00000346618 DNAH10Q8IVF4 4471 aa5.88□□□□□ -1.47
E2F3-201ENST00000346618 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
E2F3-201ENST00000346618 CRCT1Q9UGL9 99 aa5.86□□□□□ -1.47
E2F3-201ENST00000346618 LYSTQ99698 3801 aa5.86□□□□□ -1.47
E2F3-201ENST00000346618 HUWE1Q7Z6Z7 4374 aaKnown RBP5.85□□□□□ -1.47
E2F3-201ENST00000346618 DNAH9Q9NYC9 4486 aa5.84□□□□□ -1.47
E2F3-201ENST00000346618 DNAH11Q96DT5 4516 aa5.83□□□□□ -1.48
E2F3-201ENST00000346618 DYNC2H1Q8NCM8 4307 aaKnown RBP5.78□□□□□ -1.48
E2F3-201ENST00000346618 DNAH8Q96JB1 4490 aa5.71□□□□□ -1.5
E2F3-201ENST00000346618 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
E2F3-201ENST00000346618 SPRR2GQ9BYE4 73 aa5.68□□□□□ -1.5
E2F3-201ENST00000346618 DNAH7Q8WXX0 4024 aa5.65□□□□□ -1.51
E2F3-201ENST00000346618 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.51
E2F3-201ENST00000346618 DNAH2Q9P225 4427 aa5.64□□□□□ -1.51
E2F3-201ENST00000346618 FRAS1Q86XX4 4008 aa5.63□□□□□ -1.51
E2F3-201ENST00000346618 HECTD4Q9Y4D8 3996 aa5.62□□□□□ -1.51
E2F3-201ENST00000346618 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
E2F3-201ENST00000346618 DNAH17Q9UFH2 4485 aa5.59□□□□□ -1.51
E2F3-201ENST00000346618 PLECQ15149 4684 aaKnown RBP5.59□□□□□ -1.52
E2F3-201ENST00000346618 VPS13DQ5THJ4 4388 aa5.57□□□□□ -1.52
E2F3-201ENST00000346618 FAT1Q14517 4588 aa5.56□□□□□ -1.52
E2F3-201ENST00000346618 PRKDCP78527 4128 aaKnown RBP5.52□□□□□ -1.53
E2F3-201ENST00000346618 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
E2F3-201ENST00000346618 KRTAP4-1Q9BYQ7 146 aa5.47□□□□□ -1.53
E2F3-201ENST00000346618 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
E2F3-201ENST00000346618 STARD9Q9P2P6 4700 aa5.45□□□□□ -1.54
E2F3-201ENST00000346618 DNAH5Q8TE73 4624 aa5.43□□□□□ -1.54
E2F3-201ENST00000346618 KMT2AQ03164 3969 aa5.38□□□□□ -1.55
E2F3-201ENST00000346618 DNAH6Q9C0G6 4158 aa5.38□□□□□ -1.55
E2F3-201ENST00000346618 DNHD1Q96M86 4753 aa5.35□□□□□ -1.55
E2F3-201ENST00000346618 KRTAP4-5Q9BYR2 181 aa5.35□□□□□ -1.55
E2F3-201ENST00000346618 MT2AP02795 61 aa5.32□□□□□ -1.56
E2F3-201ENST00000346618 LRP1BQ9NZR2 4599 aa5.29□□□□□ -1.56
E2F3-201ENST00000346618 SACSQ9NZJ4 4579 aa5.26□□□□□ -1.57
E2F3-201ENST00000346618 PKD1P98161 4303 aa5.25□□□□□ -1.57
E2F3-201ENST00000346618 VPS13BQ7Z7G8 4022 aa5.23□□□□□ -1.57
E2F3-201ENST00000346618 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
E2F3-201ENST00000346618 APOBP04114 4563 aaKnown RBP5.23□□□□□ -1.57
E2F3-201ENST00000346618 MT1FP04733 61 aa5.21□□□□□ -1.58
E2F3-201ENST00000346618 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.58
E2F3-201ENST00000346618 MT1HP80294 61 aa5.19□□□□□ -1.58
E2F3-201ENST00000346618 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
E2F3-201ENST00000346618 FAT2Q9NYQ8 4349 aa5.18□□□□□ -1.58
E2F3-201ENST00000346618 PKHD1L1Q86WI1 4243 aa5.17□□□□□ -1.58
E2F3-201ENST00000346618 DYNC1H1Q14204 4646 aaKnown RBP5.13□□□□□ -1.59
E2F3-201ENST00000346618 MT1XP80297 61 aa5.11□□□□□ -1.59
E2F3-201ENST00000346618 PKHD1P08F94 4074 aa5.08□□□□□ -1.6
E2F3-201ENST00000346618 HYDINQ4G0P3 5121 aa5.03□□□□□ -1.6
E2F3-201ENST00000346618 LCE3EQ5T5B0 92 aa5.02□□□□□ -1.61
E2F3-201ENST00000346618 LCE3DQ9BYE3 92 aa5.02□□□□□ -1.61
E2F3-201ENST00000346618 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
E2F3-201ENST00000346618 LRP1Q07954 4544 aaKnown RBP4.99□□□□□ -1.61
E2F3-201ENST00000346618 FAT3Q8TDW7 4589 aa4.97□□□□□ -1.61
E2F3-201ENST00000346618 MYCBP2O75592 4640 aa4.95□□□□□ -1.62
E2F3-201ENST00000346618 MT1BP07438 61 aa4.93□□□□□ -1.62
E2F3-201ENST00000346618 TNXBP22105 4242 aa4.91□□□□□ -1.62
E2F3-201ENST00000346618 MT1GP13640 62 aa4.88□□□□□ -1.63
E2F3-201ENST00000346618 HSPG2P98160 4391 aa4.86□□□□□ -1.63
E2F3-201ENST00000346618 PRM1P04553 51 aa4.82□□□□□ -1.64
E2F3-201ENST00000346618 KMT2CQ8NEZ4 4911 aaKnown RBP4.81□□□□□ -1.64
E2F3-201ENST00000346618 KRTAP17-1Q9BYP8 105 aa4.81□□□□□ -1.64
E2F3-201ENST00000346618 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
E2F3-201ENST00000346618 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
E2F3-201ENST00000346618 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
E2F3-201ENST00000346618 RYR1P21817 5038 aa4.78□□□□□ -1.64
E2F3-201ENST00000346618 MT1LQ93083 61 aa4.77□□□□□ -1.65
E2F3-201ENST00000346618 SPRR2FQ96RM1 72 aa4.75□□□□□ -1.65
E2F3-201ENST00000346618 KRTAP4-8A0A0G2JLE6 195 aa4.71□□□□□ -1.65
E2F3-201ENST00000346618 KRTAP4-8Q9BYQ9 185 aa4.71□□□□□ -1.65
E2F3-201ENST00000346618 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
E2F3-201ENST00000346618 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
E2F3-201ENST00000346618 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
E2F3-201ENST00000346618 RYR3Q15413 4870 aa4.67□□□□□ -1.66
E2F3-201ENST00000346618 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
E2F3-201ENST00000346618 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
E2F3-201ENST00000346618 BIRC6Q9NR09 4857 aa4.61□□□□□ -1.67
E2F3-201ENST00000346618 RYR2Q92736 4967 aa4.58□□□□□ -1.68
E2F3-201ENST00000346618 LPAP08519 4548 aa4.57□□□□□ -1.68
E2F3-201ENST00000346618 LRP2P98164 4655 aa4.57□□□□□ -1.68
E2F3-201ENST00000346618 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
E2F3-201ENST00000346618 MT1EP04732 61 aa4.56□□□□□ -1.68
E2F3-201ENST00000346618 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
E2F3-201ENST00000346618 MT3P25713 68 aa4.5□□□□□ -1.69
E2F3-201ENST00000346618 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
E2F3-201ENST00000346618 HERC2O95714 4834 aa4.48□□□□□ -1.69
E2F3-201ENST00000346618 PCLOQ9Y6V0 5065 aa4.48□□□□□ -1.69
E2F3-201ENST00000346618 EPPK1P58107 5090 aaKnown RBP4.47□□□□□ -1.69
E2F3-201ENST00000346618 MUC17Q685J3 4493 aa4.46□□□□□ -1.7
E2F3-201ENST00000346618 MUC2Q02817 5179 aa4.42□□□□□ -1.7
E2F3-201ENST00000346618 HERC1Q15751 4861 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms