RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 DNAH10Q8IVF4 4471 aa4.38□□□□□ -1.71
RNF41-201ENST00000345093 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
RNF41-201ENST00000345093 DNAH6Q9C0G6 4158 aa4.37□□□□□ -1.71
RNF41-201ENST00000345093 ZNF469Q96JG9 3925 aaPredicted RBP4.37□□□□□ -1.71
RNF41-201ENST00000345093 VPS13DQ5THJ4 4388 aa4.36□□□□□ -1.71
RNF41-201ENST00000345093 DYNC2H1Q8NCM8 4307 aaKnown RBP4.33□□□□□ -1.72
RNF41-201ENST00000345093 SRRM2Q9UQ35 2752 aaKnown RBP4.31□□□□□ -1.72
RNF41-201ENST00000345093 LCE2BO14633 110 aa4.3□□□□□ -1.72
RNF41-201ENST00000345093 DNAH11Q96DT5 4516 aa4.29□□□□□ -1.72
RNF41-201ENST00000345093 ANK2Q01484 3957 aa4.29□□□□□ -1.72
RNF41-201ENST00000345093 DNAH8Q96JB1 4490 aa4.27□□□□□ -1.73
RNF41-201ENST00000345093 LCE2AQ5TA79 106 aaPredicted RBP4.26□□□□□ -1.73
RNF41-201ENST00000345093 TRRAPQ9Y4A5 3859 aa4.26□□□□□ -1.73
RNF41-201ENST00000345093 LYSTQ99698 3801 aa4.25□□□□□ -1.73
RNF41-201ENST00000345093 KRTAP8-1Q8IUC2 63 aa4.25□□□□□ -1.73
RNF41-201ENST00000345093 INE1O15225 51 aa4.24□□□□□ -1.73
RNF41-201ENST00000345093 MT1HP80294 61 aa4.23□□□□□ -1.73
RNF41-201ENST00000345093 MEGF8Q7Z7M0 2845 aa4.22□□□□□ -1.73
RNF41-201ENST00000345093 PLECQ15149 4684 aaKnown RBP4.16□□□□□ -1.74
RNF41-201ENST00000345093 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
RNF41-201ENST00000345093 SACSQ9NZJ4 4579 aa4.16□□□□□ -1.74
RNF41-201ENST00000345093 DYNC1H1Q14204 4646 aaKnown RBP4.16□□□□□ -1.74
RNF41-201ENST00000345093 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
RNF41-201ENST00000345093 CMYA5Q8N3K9 4069 aa4.12□□□□□ -1.75
RNF41-201ENST00000345093 COL7A1Q02388 2944 aa4.12□□□□□ -1.75
RNF41-201ENST00000345093 MT2AP02795 61 aa4.09□□□□□ -1.75
RNF41-201ENST00000345093 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
RNF41-201ENST00000345093 DNAH5Q8TE73 4624 aa4.06□□□□□ -1.76
RNF41-201ENST00000345093 FRAS1Q86XX4 4008 aa4.05□□□□□ -1.76
RNF41-201ENST00000345093 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
RNF41-201ENST00000345093 HERC1Q15751 4861 aa4.04□□□□□ -1.76
RNF41-201ENST00000345093 LRP1BQ9NZR2 4599 aa4.02□□□□□ -1.77
RNF41-201ENST00000345093 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
RNF41-201ENST00000345093 FAT2Q9NYQ8 4349 aa4.01□□□□□ -1.77
RNF41-201ENST00000345093 DNAH7Q8WXX0 4024 aa4□□□□□ -1.77
RNF41-201ENST00000345093 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
RNF41-201ENST00000345093 STARD9Q9P2P6 4700 aa3.98□□□□□ -1.77
RNF41-201ENST00000345093 CRCT1Q9UGL9 99 aa3.97□□□□□ -1.77
RNF41-201ENST00000345093 PRKDCP78527 4128 aaKnown RBP3.96□□□□□ -1.77
RNF41-201ENST00000345093 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
RNF41-201ENST00000345093 HSPG2P98160 4391 aa3.95□□□□□ -1.78
RNF41-201ENST00000345093 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
RNF41-201ENST00000345093 MT1FP04733 61 aa3.93□□□□□ -1.78
RNF41-201ENST00000345093 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
RNF41-201ENST00000345093 HECTD4Q9Y4D8 3996 aa3.9□□□□□ -1.78
RNF41-201ENST00000345093 KRTAP19-8Q3LI54 63 aa3.87□□□□□ -1.79
RNF41-201ENST00000345093 FAT1Q14517 4588 aa3.86□□□□□ -1.79
RNF41-201ENST00000345093 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
RNF41-201ENST00000345093 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
RNF41-201ENST00000345093 DNHD1Q96M86 4753 aa3.85□□□□□ -1.79
RNF41-201ENST00000345093 BIRC6Q9NR09 4857 aa3.84□□□□□ -1.79
RNF41-201ENST00000345093 APOBP04114 4563 aaKnown RBP3.83□□□□□ -1.8
RNF41-201ENST00000345093 SPRR2EP22531 72 aa3.83□□□□□ -1.8
RNF41-201ENST00000345093 SPRR2BP35325 72 aa3.83□□□□□ -1.8
RNF41-201ENST00000345093 SPRR2AP35326 72 aa3.83□□□□□ -1.8
RNF41-201ENST00000345093 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
RNF41-201ENST00000345093 VPS13BQ7Z7G8 4022 aa3.79□□□□□ -1.8
RNF41-201ENST00000345093 KRTAP17-1Q9BYP8 105 aa3.79□□□□□ -1.8
RNF41-201ENST00000345093 RYR1P21817 5038 aa3.78□□□□□ -1.8
RNF41-201ENST00000345093 FAT3Q8TDW7 4589 aa3.78□□□□□ -1.8
RNF41-201ENST00000345093 RYR2Q92736 4967 aa3.77□□□□□ -1.81
RNF41-201ENST00000345093 SPRR2DP22532 72 aa3.75□□□□□ -1.81
RNF41-201ENST00000345093 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
RNF41-201ENST00000345093 RYR3Q15413 4870 aa3.71□□□□□ -1.82
RNF41-201ENST00000345093 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
RNF41-201ENST00000345093 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
RNF41-201ENST00000345093 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
RNF41-201ENST00000345093 PKHD1P08F94 4074 aa3.67□□□□□ -1.82
RNF41-201ENST00000345093 KRTAP19-1Q8IUB9 90 aa3.66□□□□□ -1.82
RNF41-201ENST00000345093 PKD1P98161 4303 aa3.66□□□□□ -1.82
RNF41-201ENST00000345093 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.82
RNF41-201ENST00000345093 TNXBP22105 4242 aa3.64□□□□□ -1.83
RNF41-201ENST00000345093 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
RNF41-201ENST00000345093 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
RNF41-201ENST00000345093 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
RNF41-201ENST00000345093 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
RNF41-201ENST00000345093 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
RNF41-201ENST00000345093 HERC2O95714 4834 aa3.61□□□□□ -1.83
RNF41-201ENST00000345093 MT1GP13640 62 aa3.6□□□□□ -1.83
RNF41-201ENST00000345093 PCLOQ9Y6V0 5065 aa3.59□□□□□ -1.84
RNF41-201ENST00000345093 MT1BP07438 61 aa3.57□□□□□ -1.84
RNF41-201ENST00000345093 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
RNF41-201ENST00000345093 MT1XP80297 61 aa3.54□□□□□ -1.84
RNF41-201ENST00000345093 KRTAP19-2Q3LHN2 52 aa3.54□□□□□ -1.84
RNF41-201ENST00000345093 KMT2CQ8NEZ4 4911 aaKnown RBP3.43□□□□□ -1.86
RNF41-201ENST00000345093 KIAA1109Q2LD37 5005 aa3.43□□□□□ -1.86
RNF41-201ENST00000345093 HYDINQ4G0P3 5121 aa3.43□□□□□ -1.86
RNF41-201ENST00000345093 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
RNF41-201ENST00000345093 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
RNF41-201ENST00000345093 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
RNF41-201ENST00000345093 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
RNF41-201ENST00000345093 KRTAP9-7A8MTY7 169 aa3.33□□□□□ -1.88
RNF41-201ENST00000345093 FLGP20930 4061 aaPredicted RBP3.33□□□□□ -1.88
RNF41-201ENST00000345093 MT1LQ93083 61 aa3.3□□□□□ -1.88
RNF41-201ENST00000345093 LRP2P98164 4655 aa3.3□□□□□ -1.88
RNF41-201ENST00000345093 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
RNF41-201ENST00000345093 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
RNF41-201ENST00000345093 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
RNF41-201ENST00000345093 MT1EP04732 61 aa3.27□□□□□ -1.89
RNF41-201ENST00000345093 KRTAP4-8A0A0G2JLE6 195 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms