RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 MT1HL1P0DM35 61 aa4.62□□□□□ -1.67
CCDC18-201ENST00000343253 DNAH10Q8IVF4 4471 aa4.61□□□□□ -1.67
CCDC18-201ENST00000343253 DNAH9Q9NYC9 4486 aa4.6□□□□□ -1.67
CCDC18-201ENST00000343253 PLECQ15149 4684 aaKnown RBP4.58□□□□□ -1.68
CCDC18-201ENST00000343253 DNAH11Q96DT5 4516 aa4.58□□□□□ -1.68
CCDC18-201ENST00000343253 DNAH1Q9P2D7 4330 aa4.56□□□□□ -1.68
CCDC18-201ENST00000343253 DNAH5Q8TE73 4624 aa4.53□□□□□ -1.68
CCDC18-201ENST00000343253 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
CCDC18-201ENST00000343253 DNHD1Q96M86 4753 aa4.5□□□□□ -1.69
CCDC18-201ENST00000343253 LORP23490 312 aaPredicted RBP4.47□□□□□ -1.69
CCDC18-201ENST00000343253 DNAH17Q9UFH2 4485 aa4.44□□□□□ -1.7
CCDC18-201ENST00000343253 VPS13DQ5THJ4 4388 aa4.43□□□□□ -1.7
CCDC18-201ENST00000343253 FAT1Q14517 4588 aa4.42□□□□□ -1.7
CCDC18-201ENST00000343253 DNAH8Q96JB1 4490 aa4.42□□□□□ -1.7
CCDC18-201ENST00000343253 KRTAP4-5Q9BYR2 181 aa4.4□□□□□ -1.7
CCDC18-201ENST00000343253 LRP1BQ9NZR2 4599 aa4.4□□□□□ -1.71
CCDC18-201ENST00000343253 DNAH2Q9P225 4427 aa4.38□□□□□ -1.71
CCDC18-201ENST00000343253 STARD9Q9P2P6 4700 aa4.38□□□□□ -1.71
CCDC18-201ENST00000343253 DYNC1H1Q14204 4646 aaKnown RBP4.33□□□□□ -1.72
CCDC18-201ENST00000343253 ALMS1Q8TCU4 4167 aa4.31□□□□□ -1.72
CCDC18-201ENST00000343253 PRKDCP78527 4128 aaKnown RBP4.3□□□□□ -1.72
CCDC18-201ENST00000343253 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
CCDC18-201ENST00000343253 ANK2Q01484 3957 aa4.28□□□□□ -1.72
CCDC18-201ENST00000343253 MYCBP2O75592 4640 aa4.27□□□□□ -1.73
CCDC18-201ENST00000343253 KMT2AQ03164 3969 aa4.25□□□□□ -1.73
CCDC18-201ENST00000343253 DNAH3Q8TD57 4116 aa4.24□□□□□ -1.73
CCDC18-201ENST00000343253 SACSQ9NZJ4 4579 aa4.23□□□□□ -1.73
CCDC18-201ENST00000343253 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
CCDC18-201ENST00000343253 LYSTQ99698 3801 aa4.22□□□□□ -1.73
CCDC18-201ENST00000343253 RYR1P21817 5038 aa4.2□□□□□ -1.74
CCDC18-201ENST00000343253 KRTAP4-1Q9BYQ7 146 aa4.2□□□□□ -1.74
CCDC18-201ENST00000343253 VPS13BQ7Z7G8 4022 aa4.19□□□□□ -1.74
CCDC18-201ENST00000343253 DYNC2H1Q8NCM8 4307 aaKnown RBP4.19□□□□□ -1.74
CCDC18-201ENST00000343253 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
CCDC18-201ENST00000343253 FRAS1Q86XX4 4008 aa4.18□□□□□ -1.74
CCDC18-201ENST00000343253 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
CCDC18-201ENST00000343253 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
CCDC18-201ENST00000343253 FAT2Q9NYQ8 4349 aa4.12□□□□□ -1.75
CCDC18-201ENST00000343253 KIAA1109Q2LD37 5005 aa4.12□□□□□ -1.75
CCDC18-201ENST00000343253 DNAH6Q9C0G6 4158 aa4.09□□□□□ -1.75
CCDC18-201ENST00000343253 LRP1Q07954 4544 aaKnown RBP4.08□□□□□ -1.76
CCDC18-201ENST00000343253 FAT3Q8TDW7 4589 aa4.06□□□□□ -1.76
CCDC18-201ENST00000343253 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
CCDC18-201ENST00000343253 MT2AP02795 61 aa4.05□□□□□ -1.76
CCDC18-201ENST00000343253 HECTD4Q9Y4D8 3996 aa4.05□□□□□ -1.76
CCDC18-201ENST00000343253 CMYA5Q8N3K9 4069 aa4.04□□□□□ -1.76
CCDC18-201ENST00000343253 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
CCDC18-201ENST00000343253 DNAH7Q8WXX0 4024 aa4.03□□□□□ -1.76
CCDC18-201ENST00000343253 RYR3Q15413 4870 aa4.01□□□□□ -1.77
CCDC18-201ENST00000343253 MT1HP80294 61 aa4□□□□□ -1.77
CCDC18-201ENST00000343253 HYDINQ4G0P3 5121 aa3.96□□□□□ -1.78
CCDC18-201ENST00000343253 KRTAP17-1Q9BYP8 105 aa3.95□□□□□ -1.78
CCDC18-201ENST00000343253 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
CCDC18-201ENST00000343253 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
CCDC18-201ENST00000343253 LRP2P98164 4655 aa3.93□□□□□ -1.78
CCDC18-201ENST00000343253 MT1FP04733 61 aa3.93□□□□□ -1.78
CCDC18-201ENST00000343253 PKHD1P08F94 4074 aa3.9□□□□□ -1.79
CCDC18-201ENST00000343253 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
CCDC18-201ENST00000343253 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.79
CCDC18-201ENST00000343253 RYR2Q92736 4967 aa3.84□□□□□ -1.79
CCDC18-201ENST00000343253 KRTAP19-1Q8IUB9 90 aa3.82□□□□□ -1.8
CCDC18-201ENST00000343253 KMT2CQ8NEZ4 4911 aaKnown RBP3.79□□□□□ -1.8
CCDC18-201ENST00000343253 HERC2O95714 4834 aa3.78□□□□□ -1.8
CCDC18-201ENST00000343253 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
CCDC18-201ENST00000343253 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
CCDC18-201ENST00000343253 HSPG2P98160 4391 aa3.72□□□□□ -1.81
CCDC18-201ENST00000343253 MT1XP80297 61 aa3.71□□□□□ -1.82
CCDC18-201ENST00000343253 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
CCDC18-201ENST00000343253 PKD1P98161 4303 aa3.71□□□□□ -1.82
CCDC18-201ENST00000343253 LPAP08519 4548 aa3.7□□□□□ -1.82
CCDC18-201ENST00000343253 MT1GP13640 62 aa3.67□□□□□ -1.82
CCDC18-201ENST00000343253 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.82
CCDC18-201ENST00000343253 MT1BP07438 61 aa3.64□□□□□ -1.83
CCDC18-201ENST00000343253 LCE2CQ5TA81 110 aa3.61□□□□□ -1.83
CCDC18-201ENST00000343253 KRTAP9-8Q9BYQ0 159 aa3.6□□□□□ -1.83
CCDC18-201ENST00000343253 EPPK1P58107 5090 aaKnown RBP3.59□□□□□ -1.83
CCDC18-201ENST00000343253 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.84
CCDC18-201ENST00000343253 MUC17Q685J3 4493 aa3.57□□□□□ -1.84
CCDC18-201ENST00000343253 TNXBP22105 4242 aa3.57□□□□□ -1.84
CCDC18-201ENST00000343253 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
CCDC18-201ENST00000343253 SPRR2EP22531 72 aa3.55□□□□□ -1.84
CCDC18-201ENST00000343253 SPRR2BP35325 72 aa3.55□□□□□ -1.84
CCDC18-201ENST00000343253 SPRR2AP35326 72 aa3.55□□□□□ -1.84
CCDC18-201ENST00000343253 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
CCDC18-201ENST00000343253 BIRC6Q9NR09 4857 aa3.55□□□□□ -1.84
CCDC18-201ENST00000343253 ABCA13Q86UQ4 5058 aa3.54□□□□□ -1.84
CCDC18-201ENST00000343253 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
CCDC18-201ENST00000343253 KRTAP4-8Q9BYQ9 185 aa3.53□□□□□ -1.84
CCDC18-201ENST00000343253 HERC1Q15751 4861 aa3.52□□□□□ -1.85
CCDC18-201ENST00000343253 LCE2DQ5TA82 110 aaPredicted RBP3.52□□□□□ -1.85
CCDC18-201ENST00000343253 MT1LQ93083 61 aa3.52□□□□□ -1.85
CCDC18-201ENST00000343253 LCE2BO14633 110 aa3.51□□□□□ -1.85
CCDC18-201ENST00000343253 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
CCDC18-201ENST00000343253 FLGP20930 4061 aaPredicted RBP3.47□□□□□ -1.85
CCDC18-201ENST00000343253 SPRR2DP22532 72 aa3.44□□□□□ -1.86
CCDC18-201ENST00000343253 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
CCDC18-201ENST00000343253 PRM1P04553 51 aa3.42□□□□□ -1.86
CCDC18-201ENST00000343253 UBR4Q5T4S7 5183 aa3.41□□□□□ -1.86
CCDC18-201ENST00000343253 KRTAP4-7Q9BYR0 210 aa3.4□□□□□ -1.87
CCDC18-201ENST00000343253 MUC2Q02817 5179 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms