RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
SEMA6C-201ENST00000341697 DNAH11Q96DT5 4516 aa8.84□□□□□ -1
SEMA6C-201ENST00000341697 CSMD3Q7Z407 3707 aa8.82□□□□□ -1
SEMA6C-201ENST00000341697 VPS13DQ5THJ4 4388 aa8.81□□□□□ -1
SEMA6C-201ENST00000341697 DNAH10Q8IVF4 4471 aa8.78□□□□□ -1
SEMA6C-201ENST00000341697 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
SEMA6C-201ENST00000341697 DYNC1H1Q14204 4646 aaKnown RBP8.66□□□□□ -1.02
SEMA6C-201ENST00000341697 KRTAP15-1Q3LI76 137 aa8.64□□□□□ -1.03
SEMA6C-201ENST00000341697 STARD9Q9P2P6 4700 aa8.63□□□□□ -1.03
SEMA6C-201ENST00000341697 LRP1BQ9NZR2 4599 aa8.58□□□□□ -1.04
SEMA6C-201ENST00000341697 KRTAP10-12P60413 245 aa8.54□□□□□ -1.04
SEMA6C-201ENST00000341697 ANK2Q01484 3957 aa8.54□□□□□ -1.04
SEMA6C-201ENST00000341697 PRKDCP78527 4128 aaKnown RBP8.53□□□□□ -1.04
SEMA6C-201ENST00000341697 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
SEMA6C-201ENST00000341697 FAT1Q14517 4588 aa8.48□□□□□ -1.05
SEMA6C-201ENST00000341697 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
SEMA6C-201ENST00000341697 DNAH2Q9P225 4427 aa8.46□□□□□ -1.06
SEMA6C-201ENST00000341697 DYNC2H1Q8NCM8 4307 aaKnown RBP8.44□□□□□ -1.06
SEMA6C-201ENST00000341697 FAT2Q9NYQ8 4349 aa8.44□□□□□ -1.06
SEMA6C-201ENST00000341697 RYR1P21817 5038 aa8.43□□□□□ -1.06
SEMA6C-201ENST00000341697 DNAH3Q8TD57 4116 aa8.41□□□□□ -1.06
SEMA6C-201ENST00000341697 MT1HP80294 61 aa8.34□□□□□ -1.07
SEMA6C-201ENST00000341697 SACSQ9NZJ4 4579 aa8.33□□□□□ -1.08
SEMA6C-201ENST00000341697 KRTAP12-3P60328 96 aa8.25□□□□□ -1.09
SEMA6C-201ENST00000341697 KMT2AQ03164 3969 aa8.23□□□□□ -1.09
SEMA6C-201ENST00000341697 KRTAP23-1A1A580 65 aa8.23□□□□□ -1.09
SEMA6C-201ENST00000341697 LCE3AQ5TA76 89 aa8.19□□□□□ -1.1
SEMA6C-201ENST00000341697 MT2AP02795 61 aa8.16□□□□□ -1.1
SEMA6C-201ENST00000341697 DNAH8Q96JB1 4490 aa8.15□□□□□ -1.1
SEMA6C-201ENST00000341697 KIAA1109Q2LD37 5005 aa8.14□□□□□ -1.11
SEMA6C-201ENST00000341697 KRTAP17-1Q9BYP8 105 aa8.13□□□□□ -1.11
SEMA6C-201ENST00000341697 RYR3Q15413 4870 aa8.11□□□□□ -1.11
SEMA6C-201ENST00000341697 CMYA5Q8N3K9 4069 aa8.1□□□□□ -1.11
SEMA6C-201ENST00000341697 DNAH6Q9C0G6 4158 aa8.1□□□□□ -1.11
SEMA6C-201ENST00000341697 CRCT1Q9UGL9 99 aa8.08□□□□□ -1.12
SEMA6C-201ENST00000341697 APOBP04114 4563 aaKnown RBP8.07□□□□□ -1.12
SEMA6C-201ENST00000341697 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
SEMA6C-201ENST00000341697 VPS13BQ7Z7G8 4022 aa8.04□□□□□ -1.12
SEMA6C-201ENST00000341697 KRTAP8-1Q8IUC2 63 aa8.03□□□□□ -1.12
SEMA6C-201ENST00000341697 LYSTQ99698 3801 aa8□□□□□ -1.13
SEMA6C-201ENST00000341697 MT1FP04733 61 aa8□□□□□ -1.13
SEMA6C-201ENST00000341697 RYR2Q92736 4967 aa7.95□□□□□ -1.14
SEMA6C-201ENST00000341697 DNAH7Q8WXX0 4024 aa7.85□□□□□ -1.15
SEMA6C-201ENST00000341697 FAT3Q8TDW7 4589 aa7.81□□□□□ -1.16
SEMA6C-201ENST00000341697 MYCBP2O75592 4640 aa7.8□□□□□ -1.16
SEMA6C-201ENST00000341697 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
SEMA6C-201ENST00000341697 BIRC6Q9NR09 4857 aa7.77□□□□□ -1.17
SEMA6C-201ENST00000341697 HECTD4Q9Y4D8 3996 aa7.74□□□□□ -1.17
SEMA6C-201ENST00000341697 HERC2O95714 4834 aa7.74□□□□□ -1.17
SEMA6C-201ENST00000341697 HYDINQ4G0P3 5121 aa7.68□□□□□ -1.18
SEMA6C-201ENST00000341697 INE1O15225 51 aa7.67□□□□□ -1.18
SEMA6C-201ENST00000341697 FRAS1Q86XX4 4008 aa7.63□□□□□ -1.19
SEMA6C-201ENST00000341697 HSPG2P98160 4391 aa7.63□□□□□ -1.19
SEMA6C-201ENST00000341697 KRTAP19-8Q3LI54 63 aa7.56□□□□□ -1.2
SEMA6C-201ENST00000341697 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
SEMA6C-201ENST00000341697 SPRR2FQ96RM1 72 aa7.53□□□□□ -1.2
SEMA6C-201ENST00000341697 KRTAP19-5Q3LI72 72 aa7.49□□□□□ -1.21
SEMA6C-201ENST00000341697 PKHD1P08F94 4074 aa7.46□□□□□ -1.22
SEMA6C-201ENST00000341697 KRTAP9-8Q9BYQ0 159 aa7.44□□□□□ -1.22
SEMA6C-201ENST00000341697 LCE2CQ5TA81 110 aa7.44□□□□□ -1.22
SEMA6C-201ENST00000341697 HERC1Q15751 4861 aa7.41□□□□□ -1.22
SEMA6C-201ENST00000341697 LRP2P98164 4655 aa7.4□□□□□ -1.23
SEMA6C-201ENST00000341697 PCLOQ9Y6V0 5065 aa7.38□□□□□ -1.23
SEMA6C-201ENST00000341697 KRTAP10-5P60370 271 aa7.38□□□□□ -1.23
SEMA6C-201ENST00000341697 PKD1P98161 4303 aa7.38□□□□□ -1.23
SEMA6C-201ENST00000341697 KRTAP10-7P60409 375 aaPredicted RBP7.33□□□□□ -1.24
SEMA6C-201ENST00000341697 PKHD1L1Q86WI1 4243 aa7.32□□□□□ -1.24
SEMA6C-201ENST00000341697 MT1BP07438 61 aa7.32□□□□□ -1.24
SEMA6C-201ENST00000341697 KMT2CQ8NEZ4 4911 aaKnown RBP7.31□□□□□ -1.24
SEMA6C-201ENST00000341697 MT1XP80297 61 aa7.29□□□□□ -1.24
SEMA6C-201ENST00000341697 KRTAP19-4Q3LI73 84 aa7.28□□□□□ -1.24
SEMA6C-201ENST00000341697 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
SEMA6C-201ENST00000341697 KRTAP9-3Q9BYQ3 159 aa7.27□□□□□ -1.25
SEMA6C-201ENST00000341697 KRTAP19-2Q3LHN2 52 aa7.16□□□□□ -1.26
SEMA6C-201ENST00000341697 LPAP08519 4548 aa7.16□□□□□ -1.26
SEMA6C-201ENST00000341697 SPRR2EP22531 72 aa7.09□□□□□ -1.27
SEMA6C-201ENST00000341697 SPRR2BP35325 72 aa7.09□□□□□ -1.27
SEMA6C-201ENST00000341697 SPRR2AP35326 72 aa7.09□□□□□ -1.27
SEMA6C-201ENST00000341697 EPPK1P58107 5090 aaKnown RBP7.09□□□□□ -1.27
SEMA6C-201ENST00000341697 TNXBP22105 4242 aa7.09□□□□□ -1.27
SEMA6C-201ENST00000341697 ABCA13Q86UQ4 5058 aa7.04□□□□□ -1.28
SEMA6C-201ENST00000341697 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
SEMA6C-201ENST00000341697 KRTAP4-8Q9BYQ9 185 aa6.97□□□□□ -1.29
SEMA6C-201ENST00000341697 LCE2BO14633 110 aa6.95□□□□□ -1.3
SEMA6C-201ENST00000341697 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
SEMA6C-201ENST00000341697 SPRR2DP22532 72 aa6.86□□□□□ -1.31
SEMA6C-201ENST00000341697 MT1GP13640 62 aa6.85□□□□□ -1.31
SEMA6C-201ENST00000341697 FLGP20930 4061 aaPredicted RBP6.84□□□□□ -1.31
SEMA6C-201ENST00000341697 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
SEMA6C-201ENST00000341697 KRTAP19-6Q3LI70 58 aa6.66□□□□□ -1.34
SEMA6C-201ENST00000341697 KRTAP9-2Q9BYQ4 174 aa6.66□□□□□ -1.34
SEMA6C-201ENST00000341697 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.34
SEMA6C-201ENST00000341697 RNF213Q63HN8 5207 aa6.65□□□□□ -1.34
SEMA6C-201ENST00000341697 KRTAP19-3Q7Z4W3 81 aa6.63□□□□□ -1.35
SEMA6C-201ENST00000341697 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
SEMA6C-201ENST00000341697 KRTAP12-4P60329 112 aa6.59□□□□□ -1.35
SEMA6C-201ENST00000341697 UBR4Q5T4S7 5183 aa6.58□□□□□ -1.36
SEMA6C-201ENST00000341697 LCE2DQ5TA82 110 aaPredicted RBP6.57□□□□□ -1.36
SEMA6C-201ENST00000341697 MT1EP04732 61 aa6.56□□□□□ -1.36
SEMA6C-201ENST00000341697 MT1LQ93083 61 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms