RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 J3QR89 54 aa6.6□□□□□ -1.35
ERCC1-203ENST00000340192 LINC00208Q96KT6 92 aa6.6□□□□□ -1.35
ERCC1-203ENST00000340192 KLKP1Q107X0 134 aa6.58□□□□□ -1.36
ERCC1-203ENST00000340192 SPRR2GQ9BYE4 73 aa6.58□□□□□ -1.36
ERCC1-203ENST00000340192 MP68P56378 58 aa6.57□□□□□ -1.36
ERCC1-203ENST00000340192 A8MUN3 132 aa6.54□□□□□ -1.36
ERCC1-203ENST00000340192 NDUFC1O43677 76 aa6.54□□□□□ -1.36
ERCC1-203ENST00000340192 MT1BP07438 61 aa6.53□□□□□ -1.36
ERCC1-203ENST00000340192 Q5VV11 94 aa6.53□□□□□ -1.36
ERCC1-203ENST00000340192 KRTAP19-8Q3LI54 63 aa6.52□□□□□ -1.37
ERCC1-203ENST00000340192 IMUPQ9GZP8 106 aa6.51□□□□□ -1.37
ERCC1-203ENST00000340192 SCGB1A1P11684 91 aa6.49□□□□□ -1.37
ERCC1-203ENST00000340192 CRIPTQ9P021 101 aa6.48□□□□□ -1.37
ERCC1-203ENST00000340192 H0YAA0 97 aa6.47□□□□□ -1.37
ERCC1-203ENST00000340192 H3BPC8 53 aa6.47□□□□□ -1.37
ERCC1-203ENST00000340192 A6NN06 94 aa6.44□□□□□ -1.38
ERCC1-203ENST00000340192 ADM2Q7Z4H4 148 aa6.42□□□□□ -1.38
ERCC1-203ENST00000340192 MT-ATP8P03928 68 aa6.39□□□□□ -1.39
ERCC1-203ENST00000340192 DMAC1Q96GE9 116 aa6.38□□□□□ -1.39
ERCC1-203ENST00000340192 K7ERU9 68 aa6.37□□□□□ -1.39
ERCC1-203ENST00000340192 KRTAP10-5P60370 271 aa6.37□□□□□ -1.39
ERCC1-203ENST00000340192 KRTAP6-3Q3LI67 103 aa6.34□□□□□ -1.39
ERCC1-203ENST00000340192 TRAV7A0A075B6U4 112 aa6.3□□□□□ -1.4
ERCC1-203ENST00000340192 SMIM20Q8N5G0 67 aa6.3□□□□□ -1.4
ERCC1-203ENST00000340192 P0C880 135 aa6.27□□□□□ -1.41
ERCC1-203ENST00000340192 C20orf197Q8N268 126 aa6.26□□□□□ -1.41
ERCC1-203ENST00000340192 NEBP20929 6669 aa6.25□□□□□ -1.41
ERCC1-203ENST00000340192 R4GN34 69 aa6.25□□□□□ -1.41
ERCC1-203ENST00000340192 ACYP2P14621 99 aa6.23□□□□□ -1.41
ERCC1-203ENST00000340192 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
ERCC1-203ENST00000340192 M0QZ58 72 aa6.2□□□□□ -1.42
ERCC1-203ENST00000340192 SNURFQ9Y675 71 aa6.19□□□□□ -1.42
ERCC1-203ENST00000340192 PLAC4Q8WY50 150 aa6.18□□□□□ -1.42
ERCC1-203ENST00000340192 MT1XP80297 61 aa6.15□□□□□ -1.42
ERCC1-203ENST00000340192 SPTSSBQ8NFR3 76 aa6.15□□□□□ -1.42
ERCC1-203ENST00000340192 PRO2289Q9P1D8 64 aa6.15□□□□□ -1.42
ERCC1-203ENST00000340192 CHKB-CPT1BH3BT56 60 aa6.12□□□□□ -1.43
ERCC1-203ENST00000340192 LINC01554Q52M75 96 aa6.12□□□□□ -1.43
ERCC1-203ENST00000340192 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
ERCC1-203ENST00000340192 SERP2Q8N6R1 65 aa6.11□□□□□ -1.43
ERCC1-203ENST00000340192 KRTAP5-9P26371 169 aa6.09□□□□□ -1.43
ERCC1-203ENST00000340192 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
ERCC1-203ENST00000340192 KMT2DO14686 5537 aa6.05□□□□□ -1.44
ERCC1-203ENST00000340192 KRTAP12-2P59991 146 aa5.97□□□□□ -1.45
ERCC1-203ENST00000340192 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
ERCC1-203ENST00000340192 KRTAP20-1Q3LI63 56 aa5.95□□□□□ -1.46
ERCC1-203ENST00000340192 COX7CP15954 63 aa5.93□□□□□ -1.46
ERCC1-203ENST00000340192 SPRR2FQ96RM1 72 aa5.93□□□□□ -1.46
ERCC1-203ENST00000340192 COA5Q86WW8 74 aa5.92□□□□□ -1.46
ERCC1-203ENST00000340192 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
ERCC1-203ENST00000340192 KRTAP13-4Q3LI77 160 aa5.89□□□□□ -1.47
ERCC1-203ENST00000340192 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
ERCC1-203ENST00000340192 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
ERCC1-203ENST00000340192 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
ERCC1-203ENST00000340192 CYSTM1Q9H1C7 97 aa5.86□□□□□ -1.47
ERCC1-203ENST00000340192 H7BZZ5 65 aa5.84□□□□□ -1.47
ERCC1-203ENST00000340192 SPRR2EP22531 72 aa5.83□□□□□ -1.48
ERCC1-203ENST00000340192 SPRR2BP35325 72 aa5.83□□□□□ -1.48
ERCC1-203ENST00000340192 SPRR2AP35326 72 aa5.83□□□□□ -1.48
ERCC1-203ENST00000340192 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
ERCC1-203ENST00000340192 SEC61GP60059 68 aa5.8□□□□□ -1.48
ERCC1-203ENST00000340192 SERP1Q9Y6X1 66 aa5.79□□□□□ -1.48
ERCC1-203ENST00000340192 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
ERCC1-203ENST00000340192 CAMK2N1Q7Z7J9 78 aa5.75□□□□□ -1.49
ERCC1-203ENST00000340192 ANAPC13Q9BS18 74 aa5.74□□□□□ -1.49
ERCC1-203ENST00000340192 KRTAP2-3P0C7H8 128 aa5.72□□□□□ -1.49
ERCC1-203ENST00000340192 KRTAP2-4Q9BYR9 128 aa5.72□□□□□ -1.49
ERCC1-203ENST00000340192 A0A0D9SG42 100 aa5.71□□□□□ -1.5
ERCC1-203ENST00000340192 SPATA8Q6RVD6 105 aa5.71□□□□□ -1.5
ERCC1-203ENST00000340192 A0A1B0GU33 70 aa5.7□□□□□ -1.5
ERCC1-203ENST00000340192 CCDC179H3BU77 68 aa5.64□□□□□ -1.51
ERCC1-203ENST00000340192 SPRR2DP22532 72 aa5.64□□□□□ -1.51
ERCC1-203ENST00000340192 A0A1B0GU69 56 aa5.62□□□□□ -1.51
ERCC1-203ENST00000340192 SPINT4Q6UDR6 99 aa5.62□□□□□ -1.51
ERCC1-203ENST00000340192 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
ERCC1-203ENST00000340192 ATP5EP56381 51 aaPredicted RBP5.54□□□□□ -1.52
ERCC1-203ENST00000340192 KRTAP2-2Q9BYT5 123 aa5.54□□□□□ -1.52
ERCC1-203ENST00000340192 KRTAP2-1Q9BYU5 128 aa5.54□□□□□ -1.52
ERCC1-203ENST00000340192 SMIM26A0A096LP01 95 aa5.53□□□□□ -1.52
ERCC1-203ENST00000340192 A8MU10 97 aa5.51□□□□□ -1.53
ERCC1-203ENST00000340192 PCP4P48539 62 aa5.5□□□□□ -1.53
ERCC1-203ENST00000340192 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
ERCC1-203ENST00000340192 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
ERCC1-203ENST00000340192 PRR15LQ9BU68 103 aa5.46□□□□□ -1.54
ERCC1-203ENST00000340192 MT1EP04732 61 aa5.44□□□□□ -1.54
ERCC1-203ENST00000340192 LINC01558Q9Y6Z2 57 aa5.42□□□□□ -1.54
ERCC1-203ENST00000340192 TMEM258P61165 79 aa5.41□□□□□ -1.54
ERCC1-203ENST00000340192 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
ERCC1-203ENST00000340192 KRTAP19-3Q7Z4W3 81 aa5.38□□□□□ -1.55
ERCC1-203ENST00000340192 KRTAP19-5Q3LI72 72 aa5.37□□□□□ -1.55
ERCC1-203ENST00000340192 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
ERCC1-203ENST00000340192 GPR98Q8WXG9 6306 aa5.33□□□□□ -1.56
ERCC1-203ENST00000340192 TNP1P09430 55 aa5.3□□□□□ -1.56
ERCC1-203ENST00000340192 UQCR11O14957 56 aa5.28□□□□□ -1.56
ERCC1-203ENST00000340192 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
ERCC1-203ENST00000340192 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
ERCC1-203ENST00000340192 MT1GP13640 62 aa5.25□□□□□ -1.57
ERCC1-203ENST00000340192 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
ERCC1-203ENST00000340192 MT1LQ93083 61 aa5.21□□□□□ -1.58
ERCC1-203ENST00000340192 MT1MQ8N339 61 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 211.8 ms