RNA–Protein interactions for RNA: ENST00000338040.5

FBXO40-201, Transcript of F-box protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO40, Length 5,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40-201ENST00000338040 DNAH9Q9NYC9 4486 aa3.39□□□□□ -1.87
FBXO40-201ENST00000338040 ANK2Q01484 3957 aa3.37□□□□□ -1.87
FBXO40-201ENST00000338040 CRCT1Q9UGL9 99 aa3.34□□□□□ -1.88
FBXO40-201ENST00000338040 LORP23490 312 aaPredicted RBP3.33□□□□□ -1.88
FBXO40-201ENST00000338040 PRKDCP78527 4128 aaKnown RBP3.32□□□□□ -1.88
FBXO40-201ENST00000338040 DNAH11Q96DT5 4516 aa3.3□□□□□ -1.88
FBXO40-201ENST00000338040 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
FBXO40-201ENST00000338040 KRTAP19-4Q3LI73 84 aa3.28□□□□□ -1.88
FBXO40-201ENST00000338040 ALMS1Q8TCU4 4167 aa3.27□□□□□ -1.89
FBXO40-201ENST00000338040 DNAH2Q9P225 4427 aa3.26□□□□□ -1.89
FBXO40-201ENST00000338040 PLECQ15149 4684 aaKnown RBP3.26□□□□□ -1.89
FBXO40-201ENST00000338040 DNAH17Q9UFH2 4485 aa3.26□□□□□ -1.89
FBXO40-201ENST00000338040 DNAH10Q8IVF4 4471 aa3.26□□□□□ -1.89
FBXO40-201ENST00000338040 STARD9Q9P2P6 4700 aa3.22□□□□□ -1.89
FBXO40-201ENST00000338040 KRTAP4-5Q9BYR2 181 aa3.22□□□□□ -1.89
FBXO40-201ENST00000338040 DNAH5Q8TE73 4624 aa3.22□□□□□ -1.89
FBXO40-201ENST00000338040 DNAH1Q9P2D7 4330 aa3.22□□□□□ -1.89
FBXO40-201ENST00000338040 VPS13DQ5THJ4 4388 aa3.21□□□□□ -1.9
FBXO40-201ENST00000338040 DNAH3Q8TD57 4116 aa3.21□□□□□ -1.9
FBXO40-201ENST00000338040 SPRR2GQ9BYE4 73 aa3.19□□□□□ -1.9
FBXO40-201ENST00000338040 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
FBXO40-201ENST00000338040 CMYA5Q8N3K9 4069 aa3.16□□□□□ -1.9
FBXO40-201ENST00000338040 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
FBXO40-201ENST00000338040 KIAA1109Q2LD37 5005 aa3.13□□□□□ -1.91
FBXO40-201ENST00000338040 DNAH8Q96JB1 4490 aa3.13□□□□□ -1.91
FBXO40-201ENST00000338040 DYNC1H1Q14204 4646 aaKnown RBP3.12□□□□□ -1.91
FBXO40-201ENST00000338040 SACSQ9NZJ4 4579 aa3.11□□□□□ -1.91
FBXO40-201ENST00000338040 RYR2Q92736 4967 aa3.11□□□□□ -1.91
FBXO40-201ENST00000338040 CSMD3Q7Z407 3707 aa3.1□□□□□ -1.91
FBXO40-201ENST00000338040 RYR3Q15413 4870 aa3.09□□□□□ -1.91
FBXO40-201ENST00000338040 LRP1BQ9NZR2 4599 aa3.08□□□□□ -1.92
FBXO40-201ENST00000338040 DYNC2H1Q8NCM8 4307 aaKnown RBP3.07□□□□□ -1.92
FBXO40-201ENST00000338040 KMT2AQ03164 3969 aa3.07□□□□□ -1.92
FBXO40-201ENST00000338040 KMT2CQ8NEZ4 4911 aaKnown RBP3.06□□□□□ -1.92
FBXO40-201ENST00000338040 KRTAP19-5Q3LI72 72 aa3.06□□□□□ -1.92
FBXO40-201ENST00000338040 BIRC6Q9NR09 4857 aa3.05□□□□□ -1.92
FBXO40-201ENST00000338040 MT1HP80294 61 aa3.05□□□□□ -1.92
FBXO40-201ENST00000338040 FAT1Q14517 4588 aa3.05□□□□□ -1.92
FBXO40-201ENST00000338040 RYR1P21817 5038 aa3.05□□□□□ -1.92
FBXO40-201ENST00000338040 MT2AP02795 61 aa3.05□□□□□ -1.92
FBXO40-201ENST00000338040 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
FBXO40-201ENST00000338040 DNAH7Q8WXX0 4024 aa3.04□□□□□ -1.92
FBXO40-201ENST00000338040 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
FBXO40-201ENST00000338040 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
FBXO40-201ENST00000338040 HYDINQ4G0P3 5121 aa3□□□□□ -1.93
FBXO40-201ENST00000338040 KRTAP17-1Q9BYP8 105 aa3□□□□□ -1.93
FBXO40-201ENST00000338040 DNAH6Q9C0G6 4158 aa2.99□□□□□ -1.93
FBXO40-201ENST00000338040 KRTAP10-7P60409 375 aaPredicted RBP2.99□□□□□ -1.93
FBXO40-201ENST00000338040 APOBP04114 4563 aaKnown RBP2.97□□□□□ -1.93
FBXO40-201ENST00000338040 HERC2O95714 4834 aa2.97□□□□□ -1.93
FBXO40-201ENST00000338040 LYSTQ99698 3801 aa2.97□□□□□ -1.93
FBXO40-201ENST00000338040 MT1FP04733 61 aa2.95□□□□□ -1.94
FBXO40-201ENST00000338040 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
FBXO40-201ENST00000338040 EPPK1P58107 5090 aaKnown RBP2.92□□□□□ -1.94
FBXO40-201ENST00000338040 PKHD1P08F94 4074 aa2.9□□□□□ -1.95
FBXO40-201ENST00000338040 VPS13BQ7Z7G8 4022 aa2.88□□□□□ -1.95
FBXO40-201ENST00000338040 HECTD4Q9Y4D8 3996 aa2.87□□□□□ -1.95
FBXO40-201ENST00000338040 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
FBXO40-201ENST00000338040 LRP1Q07954 4544 aaKnown RBP2.87□□□□□ -1.95
FBXO40-201ENST00000338040 HSPG2P98160 4391 aa2.86□□□□□ -1.95
FBXO40-201ENST00000338040 PKD1P98161 4303 aa2.86□□□□□ -1.95
FBXO40-201ENST00000338040 KRTAP19-1Q8IUB9 90 aa2.86□□□□□ -1.95
FBXO40-201ENST00000338040 MYCBP2O75592 4640 aa2.86□□□□□ -1.95
FBXO40-201ENST00000338040 FAT3Q8TDW7 4589 aa2.85□□□□□ -1.95
FBXO40-201ENST00000338040 SPRR2FQ96RM1 72 aa2.85□□□□□ -1.95
FBXO40-201ENST00000338040 ABCA13Q86UQ4 5058 aa2.82□□□□□ -1.96
FBXO40-201ENST00000338040 MT1XP80297 61 aa2.82□□□□□ -1.96
FBXO40-201ENST00000338040 FRAS1Q86XX4 4008 aa2.81□□□□□ -1.96
FBXO40-201ENST00000338040 LCE3BQ5TA77 95 aa2.78□□□□□ -1.96
FBXO40-201ENST00000338040 PCLOQ9Y6V0 5065 aa2.77□□□□□ -1.97
FBXO40-201ENST00000338040 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
FBXO40-201ENST00000338040 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
FBXO40-201ENST00000338040 HERC1Q15751 4861 aa2.75□□□□□ -1.97
FBXO40-201ENST00000338040 MT1BP07438 61 aa2.74□□□□□ -1.97
FBXO40-201ENST00000338040 MT1GP13640 62 aa2.74□□□□□ -1.97
FBXO40-201ENST00000338040 LRP2P98164 4655 aa2.73□□□□□ -1.97
FBXO40-201ENST00000338040 KRTAP19-2Q3LHN2 52 aa2.68□□□□□ -1.98
FBXO40-201ENST00000338040 SPRR2EP22531 72 aa2.67□□□□□ -1.98
FBXO40-201ENST00000338040 SPRR2BP35325 72 aa2.67□□□□□ -1.98
FBXO40-201ENST00000338040 SPRR2AP35326 72 aa2.67□□□□□ -1.98
FBXO40-201ENST00000338040 MT1LQ93083 61 aa2.66□□□□□ -1.98
FBXO40-201ENST00000338040 KRTAP9-8Q9BYQ0 159 aa2.66□□□□□ -1.98
FBXO40-201ENST00000338040 PKHD1L1Q86WI1 4243 aa2.65□□□□□ -1.98
FBXO40-201ENST00000338040 LCE2CQ5TA81 110 aa2.65□□□□□ -1.99
FBXO40-201ENST00000338040 MUC17Q685J3 4493 aa2.64□□□□□ -1.99
FBXO40-201ENST00000338040 LCE2BO14633 110 aa2.63□□□□□ -1.99
FBXO40-201ENST00000338040 TNXBP22105 4242 aa2.61□□□□□ -1.99
FBXO40-201ENST00000338040 KRTAP9-3Q9BYQ3 159 aa2.61□□□□□ -1.99
FBXO40-201ENST00000338040 HMCN2Q8NDA2 5059 aa2.6□□□□□ -1.99
FBXO40-201ENST00000338040 SPRR2DP22532 72 aa2.6□□□□□ -1.99
FBXO40-201ENST00000338040 MT1EP04732 61 aa2.59□□□□□ -2
FBXO40-201ENST00000338040 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -2
FBXO40-201ENST00000338040 LPAP08519 4548 aa2.57□□□□□ -2
FBXO40-201ENST00000338040 RNF213Q63HN8 5207 aa2.57□□□□□ -2
FBXO40-201ENST00000338040 KRTAP4-8A0A0G2JLE6 195 aa2.56□□□□□ -2
FBXO40-201ENST00000338040 KRTAP4-8Q9BYQ9 185 aa2.56□□□□□ -2
FBXO40-201ENST00000338040 UBR4Q5T4S7 5183 aa2.56□□□□□ -2
FBXO40-201ENST00000338040 FLGP20930 4061 aaPredicted RBP2.55□□□□□ -2
FBXO40-201ENST00000338040 PRM1P04553 51 aa2.54□□□□□ -2
FBXO40-201ENST00000338040 MT3P25713 68 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 945.1 ms