RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 CSMD1Q96PZ7 3565 aa2.25□□□□□ -2.05
TNRC6B-202ENST00000335727 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
TNRC6B-202ENST00000335727 DNAH17Q9UFH2 4485 aa2.25□□□□□ -2.05
TNRC6B-202ENST00000335727 ANK2Q01484 3957 aa2.24□□□□□ -2.05
TNRC6B-202ENST00000335727 KRTAP8-1Q8IUC2 63 aa2.22□□□□□ -2.05
TNRC6B-202ENST00000335727 MUC3AQ02505 3323 aa2.22□□□□□ -2.05
TNRC6B-202ENST00000335727 KRTAP10-5P60370 271 aa2.22□□□□□ -2.05
TNRC6B-202ENST00000335727 LYSTQ99698 3801 aa2.21□□□□□ -2.06
TNRC6B-202ENST00000335727 DNAH7Q8WXX0 4024 aa2.2□□□□□ -2.06
TNRC6B-202ENST00000335727 PLECQ15149 4684 aaKnown RBP2.2□□□□□ -2.06
TNRC6B-202ENST00000335727 SVEP1Q4LDE5 3571 aa2.19□□□□□ -2.06
TNRC6B-202ENST00000335727 BSNQ9UPA5 3926 aa2.19□□□□□ -2.06
TNRC6B-202ENST00000335727 CSMD3Q7Z407 3707 aa2.19□□□□□ -2.06
TNRC6B-202ENST00000335727 FRAS1Q86XX4 4008 aa2.19□□□□□ -2.06
TNRC6B-202ENST00000335727 DNAH8Q96JB1 4490 aa2.17□□□□□ -2.06
TNRC6B-202ENST00000335727 FAT1Q14517 4588 aa2.14□□□□□ -2.07
TNRC6B-202ENST00000335727 LCE3AQ5TA76 89 aa2.12□□□□□ -2.07
TNRC6B-202ENST00000335727 APOBP04114 4563 aaKnown RBP2.1□□□□□ -2.07
TNRC6B-202ENST00000335727 DNAH3Q8TD57 4116 aa2.09□□□□□ -2.07
TNRC6B-202ENST00000335727 CSMD2Q7Z408 3487 aa2.08□□□□□ -2.08
TNRC6B-202ENST00000335727 VPS13DQ5THJ4 4388 aa2.07□□□□□ -2.08
TNRC6B-202ENST00000335727 DNAH9Q9NYC9 4486 aa2.06□□□□□ -2.08
TNRC6B-202ENST00000335727 LCE3CQ5T5A8 94 aa2.05□□□□□ -2.08
TNRC6B-202ENST00000335727 DNAH6Q9C0G6 4158 aa2.03□□□□□ -2.08
TNRC6B-202ENST00000335727 LORP23490 312 aaPredicted RBP2.03□□□□□ -2.08
TNRC6B-202ENST00000335727 ZNF469Q96JG9 3925 aaPredicted RBP2.03□□□□□ -2.08
TNRC6B-202ENST00000335727 MYCBP2O75592 4640 aa2.02□□□□□ -2.09
TNRC6B-202ENST00000335727 KMT2AQ03164 3969 aa2.02□□□□□ -2.09
TNRC6B-202ENST00000335727 SPRR2FQ96RM1 72 aa2.01□□□□□ -2.09
TNRC6B-202ENST00000335727 VPS13BQ7Z7G8 4022 aa2.01□□□□□ -2.09
TNRC6B-202ENST00000335727 HECTD4Q9Y4D8 3996 aa2.01□□□□□ -2.09
TNRC6B-202ENST00000335727 FAT3Q8TDW7 4589 aa2□□□□□ -2.09
TNRC6B-202ENST00000335727 SACSQ9NZJ4 4579 aa2□□□□□ -2.09
TNRC6B-202ENST00000335727 LRP1Q07954 4544 aaKnown RBP2□□□□□ -2.09
TNRC6B-202ENST00000335727 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
TNRC6B-202ENST00000335727 KRTAP10-4P60372 401 aaPredicted RBP1.98□□□□□ -2.09
TNRC6B-202ENST00000335727 MT1HL1P0DM35 61 aa1.97□□□□□ -2.09
TNRC6B-202ENST00000335727 SPRR2GQ9BYE4 73 aa1.97□□□□□ -2.09
TNRC6B-202ENST00000335727 LRP1BQ9NZR2 4599 aa1.97□□□□□ -2.09
TNRC6B-202ENST00000335727 FAT2Q9NYQ8 4349 aa1.96□□□□□ -2.1
TNRC6B-202ENST00000335727 PKD1P98161 4303 aa1.95□□□□□ -2.1
TNRC6B-202ENST00000335727 DNAH5Q8TE73 4624 aa1.95□□□□□ -2.1
TNRC6B-202ENST00000335727 SPRR2DP22532 72 aa1.93□□□□□ -2.1
TNRC6B-202ENST00000335727 FLGP20930 4061 aaPredicted RBP1.93□□□□□ -2.1
TNRC6B-202ENST00000335727 PRKDCP78527 4128 aaKnown RBP1.92□□□□□ -2.1
TNRC6B-202ENST00000335727 SPRR2EP22531 72 aa1.92□□□□□ -2.1
TNRC6B-202ENST00000335727 SPRR2BP35325 72 aa1.92□□□□□ -2.1
TNRC6B-202ENST00000335727 SPRR2AP35326 72 aa1.92□□□□□ -2.1
TNRC6B-202ENST00000335727 KRTAP4-5Q9BYR2 181 aa1.92□□□□□ -2.1
TNRC6B-202ENST00000335727 DYNC1H1Q14204 4646 aaKnown RBP1.91□□□□□ -2.1
TNRC6B-202ENST00000335727 LCE2BO14633 110 aa1.9□□□□□ -2.1
TNRC6B-202ENST00000335727 DYNC2H1Q8NCM8 4307 aaKnown RBP1.89□□□□□ -2.11
TNRC6B-202ENST00000335727 HSPG2P98160 4391 aa1.85□□□□□ -2.11
TNRC6B-202ENST00000335727 KRTAP4-1Q9BYQ7 146 aa1.85□□□□□ -2.11
TNRC6B-202ENST00000335727 LCE3EQ5T5B0 92 aa1.84□□□□□ -2.12
TNRC6B-202ENST00000335727 KRTAP2-3P0C7H8 128 aa1.81□□□□□ -2.12
TNRC6B-202ENST00000335727 KRTAP2-4Q9BYR9 128 aa1.81□□□□□ -2.12
TNRC6B-202ENST00000335727 KRTAP2-1Q9BYU5 128 aa1.81□□□□□ -2.12
TNRC6B-202ENST00000335727 PKHD1P08F94 4074 aa1.81□□□□□ -2.12
TNRC6B-202ENST00000335727 LCE3BQ5TA77 95 aa1.8□□□□□ -2.12
TNRC6B-202ENST00000335727 LCE3DQ9BYE3 92 aa1.8□□□□□ -2.12
TNRC6B-202ENST00000335727 PKHD1L1Q86WI1 4243 aa1.79□□□□□ -2.12
TNRC6B-202ENST00000335727 MT1HP80294 61 aa1.79□□□□□ -2.12
TNRC6B-202ENST00000335727 STARD9Q9P2P6 4700 aa1.79□□□□□ -2.12
TNRC6B-202ENST00000335727 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
TNRC6B-202ENST00000335727 LCE2CQ5TA81 110 aa1.77□□□□□ -2.13
TNRC6B-202ENST00000335727 RYR1P21817 5038 aa1.77□□□□□ -2.13
TNRC6B-202ENST00000335727 TNXBP22105 4242 aa1.74□□□□□ -2.13
TNRC6B-202ENST00000335727 MT1GP13640 62 aa1.73□□□□□ -2.13
TNRC6B-202ENST00000335727 KRTAP19-8Q3LI54 63 aa1.72□□□□□ -2.13
TNRC6B-202ENST00000335727 MT2AP02795 61 aa1.71□□□□□ -2.14
TNRC6B-202ENST00000335727 LCE2DQ5TA82 110 aaPredicted RBP1.71□□□□□ -2.14
TNRC6B-202ENST00000335727 KRTAP17-1Q9BYP8 105 aa1.71□□□□□ -2.14
TNRC6B-202ENST00000335727 LPAP08519 4548 aa1.7□□□□□ -2.14
TNRC6B-202ENST00000335727 PRM1P04553 51 aa1.69□□□□□ -2.14
TNRC6B-202ENST00000335727 MT1FP04733 61 aa1.69□□□□□ -2.14
TNRC6B-202ENST00000335727 MT1LQ93083 61 aa1.68□□□□□ -2.14
TNRC6B-202ENST00000335727 MUC17Q685J3 4493 aa1.67□□□□□ -2.14
TNRC6B-202ENST00000335727 DNHD1Q96M86 4753 aa1.67□□□□□ -2.14
TNRC6B-202ENST00000335727 MT1AP04731 61 aa1.67□□□□□ -2.14
TNRC6B-202ENST00000335727 MT1EP04732 61 aa1.66□□□□□ -2.14
TNRC6B-202ENST00000335727 RYR3Q15413 4870 aa1.65□□□□□ -2.14
TNRC6B-202ENST00000335727 HERC2O95714 4834 aa1.64□□□□□ -2.15
TNRC6B-202ENST00000335727 LRP2P98164 4655 aa1.63□□□□□ -2.15
TNRC6B-202ENST00000335727 KRTAP19-1Q8IUB9 90 aa1.63□□□□□ -2.15
TNRC6B-202ENST00000335727 MT1XP80297 61 aa1.63□□□□□ -2.15
TNRC6B-202ENST00000335727 KRTAP2-2Q9BYT5 123 aa1.62□□□□□ -2.15
TNRC6B-202ENST00000335727 SYNE2Q8WXH0 6885 aaKnown RBP1.61□□□□□ -2.15
TNRC6B-202ENST00000335727 LCE2AQ5TA79 106 aaPredicted RBP1.61□□□□□ -2.15
TNRC6B-202ENST00000335727 BIRC6Q9NR09 4857 aa1.6□□□□□ -2.15
TNRC6B-202ENST00000335727 LCE1DQ5T752 114 aa1.6□□□□□ -2.15
TNRC6B-202ENST00000335727 KRTAP19-3Q7Z4W3 81 aa1.59□□□□□ -2.16
TNRC6B-202ENST00000335727 PCLOQ9Y6V0 5065 aa1.58□□□□□ -2.16
TNRC6B-202ENST00000335727 KRTAP4-8A0A0G2JLE6 195 aa1.58□□□□□ -2.16
TNRC6B-202ENST00000335727 KRTAP4-8Q9BYQ9 185 aa1.58□□□□□ -2.16
TNRC6B-202ENST00000335727 KRTAP4-7Q9BYR0 210 aa1.57□□□□□ -2.16
TNRC6B-202ENST00000335727 MT1BP07438 61 aa1.56□□□□□ -2.16
TNRC6B-202ENST00000335727 MT4P47944 62 aa1.56□□□□□ -2.16
TNRC6B-202ENST00000335727 LCE1BQ5T7P3 118 aa1.56□□□□□ -2.16
TNRC6B-202ENST00000335727 KRTAP9-6A0A140TA67 174 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms