RNA–Protein interactions for RNA: ENST00000334186.8

PPFIA3-201, Transcript of PTPRF interacting protein alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIA3, Length 4,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-201ENST00000334186 DNAH11Q96DT5 4516 aa7.86□□□□□ -1.15
PPFIA3-201ENST00000334186 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
PPFIA3-201ENST00000334186 KRTAP4-5Q9BYR2 181 aa7.84□□□□□ -1.15
PPFIA3-201ENST00000334186 VPS13DQ5THJ4 4388 aa7.76□□□□□ -1.17
PPFIA3-201ENST00000334186 ANK2Q01484 3957 aa7.75□□□□□ -1.17
PPFIA3-201ENST00000334186 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
PPFIA3-201ENST00000334186 ALMS1Q8TCU4 4167 aa7.7□□□□□ -1.18
PPFIA3-201ENST00000334186 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
PPFIA3-201ENST00000334186 FAT1Q14517 4588 aa7.66□□□□□ -1.18
PPFIA3-201ENST00000334186 DYNC1H1Q14204 4646 aaKnown RBP7.62□□□□□ -1.19
PPFIA3-201ENST00000334186 KMT2AQ03164 3969 aa7.61□□□□□ -1.19
PPFIA3-201ENST00000334186 DNAH17Q9UFH2 4485 aa7.61□□□□□ -1.19
PPFIA3-201ENST00000334186 LRP1BQ9NZR2 4599 aa7.58□□□□□ -1.2
PPFIA3-201ENST00000334186 DNAH3Q8TD57 4116 aa7.53□□□□□ -1.2
PPFIA3-201ENST00000334186 CMYA5Q8N3K9 4069 aa7.52□□□□□ -1.21
PPFIA3-201ENST00000334186 DNAH2Q9P225 4427 aa7.51□□□□□ -1.21
PPFIA3-201ENST00000334186 LYSTQ99698 3801 aa7.48□□□□□ -1.21
PPFIA3-201ENST00000334186 RYR1P21817 5038 aa7.46□□□□□ -1.22
PPFIA3-201ENST00000334186 KIAA1109Q2LD37 5005 aa7.44□□□□□ -1.22
PPFIA3-201ENST00000334186 DNAH8Q96JB1 4490 aa7.43□□□□□ -1.22
PPFIA3-201ENST00000334186 DYNC2H1Q8NCM8 4307 aaKnown RBP7.39□□□□□ -1.23
PPFIA3-201ENST00000334186 INE1O15225 51 aa7.39□□□□□ -1.23
PPFIA3-201ENST00000334186 RYR3Q15413 4870 aa7.32□□□□□ -1.24
PPFIA3-201ENST00000334186 SACSQ9NZJ4 4579 aa7.31□□□□□ -1.24
PPFIA3-201ENST00000334186 FAT2Q9NYQ8 4349 aa7.3□□□□□ -1.24
PPFIA3-201ENST00000334186 DNAH7Q8WXX0 4024 aa7.3□□□□□ -1.24
PPFIA3-201ENST00000334186 VPS13BQ7Z7G8 4022 aa7.26□□□□□ -1.25
PPFIA3-201ENST00000334186 DNAH6Q9C0G6 4158 aa7.24□□□□□ -1.25
PPFIA3-201ENST00000334186 HYDINQ4G0P3 5121 aa7.23□□□□□ -1.25
PPFIA3-201ENST00000334186 MYCBP2O75592 4640 aa7.23□□□□□ -1.25
PPFIA3-201ENST00000334186 APOBP04114 4563 aaKnown RBP7.2□□□□□ -1.26
PPFIA3-201ENST00000334186 KRTAP17-1Q9BYP8 105 aa7.19□□□□□ -1.26
PPFIA3-201ENST00000334186 LRP1Q07954 4544 aaKnown RBP7.16□□□□□ -1.26
PPFIA3-201ENST00000334186 RYR2Q92736 4967 aa7.16□□□□□ -1.26
PPFIA3-201ENST00000334186 FRAS1Q86XX4 4008 aa7.14□□□□□ -1.27
PPFIA3-201ENST00000334186 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
PPFIA3-201ENST00000334186 HECTD4Q9Y4D8 3996 aa7.13□□□□□ -1.27
PPFIA3-201ENST00000334186 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
PPFIA3-201ENST00000334186 KRTAP10-12P60413 245 aa7.12□□□□□ -1.27
PPFIA3-201ENST00000334186 KRTAP4-1Q9BYQ7 146 aa7.08□□□□□ -1.28
PPFIA3-201ENST00000334186 FAT3Q8TDW7 4589 aa7.08□□□□□ -1.28
PPFIA3-201ENST00000334186 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
PPFIA3-201ENST00000334186 KMT2CQ8NEZ4 4911 aaKnown RBP7.04□□□□□ -1.28
PPFIA3-201ENST00000334186 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
PPFIA3-201ENST00000334186 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
PPFIA3-201ENST00000334186 HERC2O95714 4834 aa6.95□□□□□ -1.3
PPFIA3-201ENST00000334186 HSPG2P98160 4391 aa6.82□□□□□ -1.32
PPFIA3-201ENST00000334186 LRP2P98164 4655 aa6.81□□□□□ -1.32
PPFIA3-201ENST00000334186 PKD1P98161 4303 aa6.8□□□□□ -1.32
PPFIA3-201ENST00000334186 BIRC6Q9NR09 4857 aa6.75□□□□□ -1.33
PPFIA3-201ENST00000334186 MT1HP80294 61 aa6.71□□□□□ -1.34
PPFIA3-201ENST00000334186 CRCT1Q9UGL9 99 aa6.71□□□□□ -1.34
PPFIA3-201ENST00000334186 EPPK1P58107 5090 aaKnown RBP6.69□□□□□ -1.34
PPFIA3-201ENST00000334186 SPRR2GQ9BYE4 73 aa6.61□□□□□ -1.35
PPFIA3-201ENST00000334186 MT2AP02795 61 aa6.61□□□□□ -1.35
PPFIA3-201ENST00000334186 LPAP08519 4548 aa6.54□□□□□ -1.36
PPFIA3-201ENST00000334186 ABCA13Q86UQ4 5058 aa6.54□□□□□ -1.36
PPFIA3-201ENST00000334186 MT1FP04733 61 aa6.51□□□□□ -1.37
PPFIA3-201ENST00000334186 PCLOQ9Y6V0 5065 aa6.48□□□□□ -1.37
PPFIA3-201ENST00000334186 KRTAP8-1Q8IUC2 63 aa6.47□□□□□ -1.37
PPFIA3-201ENST00000334186 HERC1Q15751 4861 aa6.44□□□□□ -1.38
PPFIA3-201ENST00000334186 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
PPFIA3-201ENST00000334186 TNXBP22105 4242 aa6.37□□□□□ -1.39
PPFIA3-201ENST00000334186 PKHD1L1Q86WI1 4243 aa6.35□□□□□ -1.39
PPFIA3-201ENST00000334186 LCE2CQ5TA81 110 aa6.28□□□□□ -1.4
PPFIA3-201ENST00000334186 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
PPFIA3-201ENST00000334186 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
PPFIA3-201ENST00000334186 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
PPFIA3-201ENST00000334186 KRTAP19-8Q3LI54 63 aa6.18□□□□□ -1.42
PPFIA3-201ENST00000334186 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
PPFIA3-201ENST00000334186 LCE3CQ5T5A8 94 aa6.16□□□□□ -1.42
PPFIA3-201ENST00000334186 KRTAP19-2Q3LHN2 52 aa6.14□□□□□ -1.43
PPFIA3-201ENST00000334186 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
PPFIA3-201ENST00000334186 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
PPFIA3-201ENST00000334186 MUC17Q685J3 4493 aa6.04□□□□□ -1.44
PPFIA3-201ENST00000334186 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
PPFIA3-201ENST00000334186 MUC2Q02817 5179 aa6.03□□□□□ -1.44
PPFIA3-201ENST00000334186 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
PPFIA3-201ENST00000334186 MT1BP07438 61 aa6.01□□□□□ -1.45
PPFIA3-201ENST00000334186 MT1XP80297 61 aa6.01□□□□□ -1.45
PPFIA3-201ENST00000334186 UBR4Q5T4S7 5183 aa6.01□□□□□ -1.45
PPFIA3-201ENST00000334186 FAT4Q6V0I7 4981 aa5.98□□□□□ -1.45
PPFIA3-201ENST00000334186 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.45
PPFIA3-201ENST00000334186 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.46
PPFIA3-201ENST00000334186 HMCN2Q8NDA2 5059 aa5.94□□□□□ -1.46
PPFIA3-201ENST00000334186 FSIP2Q5CZC0 6907 aa5.94□□□□□ -1.46
PPFIA3-201ENST00000334186 LCE2BO14633 110 aa5.8□□□□□ -1.48
PPFIA3-201ENST00000334186 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
PPFIA3-201ENST00000334186 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
PPFIA3-201ENST00000334186 KRTAP12-4P60329 112 aa5.74□□□□□ -1.49
PPFIA3-201ENST00000334186 LCE2AQ5TA79 106 aaPredicted RBP5.63□□□□□ -1.51
PPFIA3-201ENST00000334186 MT1GP13640 62 aa5.61□□□□□ -1.51
PPFIA3-201ENST00000334186 SPRR2EP22531 72 aa5.56□□□□□ -1.52
PPFIA3-201ENST00000334186 SPRR2BP35325 72 aa5.56□□□□□ -1.52
PPFIA3-201ENST00000334186 SPRR2AP35326 72 aa5.56□□□□□ -1.52
PPFIA3-201ENST00000334186 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
PPFIA3-201ENST00000334186 SYNE1Q8NF91 8797 aaKnown RBP5.44□□□□□ -1.54
PPFIA3-201ENST00000334186 MT1LQ93083 61 aa5.42□□□□□ -1.54
PPFIA3-201ENST00000334186 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
PPFIA3-201ENST00000334186 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms