RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 DNAH10Q8IVF4 4471 aa5.13□□□□□ -1.59
POLR1B-202ENST00000333990 KRTAP3-3Q9BYR6 98 aa5.13□□□□□ -1.59
POLR1B-202ENST00000333990 VPS13DQ5THJ4 4388 aa5.11□□□□□ -1.59
POLR1B-202ENST00000333990 CSMD3Q7Z407 3707 aa5.1□□□□□ -1.59
POLR1B-202ENST00000333990 KRTAP3-2Q9BYR7 98 aa5.07□□□□□ -1.6
POLR1B-202ENST00000333990 DYNC1H1Q14204 4646 aaKnown RBP5.04□□□□□ -1.6
POLR1B-202ENST00000333990 DNAH17Q9UFH2 4485 aa5.02□□□□□ -1.61
POLR1B-202ENST00000333990 STARD9Q9P2P6 4700 aa5□□□□□ -1.61
POLR1B-202ENST00000333990 PRKDCP78527 4128 aaKnown RBP4.98□□□□□ -1.61
POLR1B-202ENST00000333990 LRP1BQ9NZR2 4599 aa4.97□□□□□ -1.61
POLR1B-202ENST00000333990 RYR1P21817 5038 aa4.96□□□□□ -1.62
POLR1B-202ENST00000333990 DNAH3Q8TD57 4116 aa4.95□□□□□ -1.62
POLR1B-202ENST00000333990 ANK2Q01484 3957 aa4.95□□□□□ -1.62
POLR1B-202ENST00000333990 FAT1Q14517 4588 aa4.93□□□□□ -1.62
POLR1B-202ENST00000333990 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.62
POLR1B-202ENST00000333990 KIAA1109Q2LD37 5005 aa4.9□□□□□ -1.63
POLR1B-202ENST00000333990 DYNC2H1Q8NCM8 4307 aaKnown RBP4.9□□□□□ -1.63
POLR1B-202ENST00000333990 CMYA5Q8N3K9 4069 aa4.88□□□□□ -1.63
POLR1B-202ENST00000333990 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
POLR1B-202ENST00000333990 FAT2Q9NYQ8 4349 aa4.88□□□□□ -1.63
POLR1B-202ENST00000333990 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
POLR1B-202ENST00000333990 DNAH2Q9P225 4427 aa4.85□□□□□ -1.63
POLR1B-202ENST00000333990 MT1HP80294 61 aa4.85□□□□□ -1.63
POLR1B-202ENST00000333990 DNAH8Q96JB1 4490 aa4.83□□□□□ -1.64
POLR1B-202ENST00000333990 SACSQ9NZJ4 4579 aa4.81□□□□□ -1.64
POLR1B-202ENST00000333990 RYR3Q15413 4870 aa4.81□□□□□ -1.64
POLR1B-202ENST00000333990 LORP23490 312 aaPredicted RBP4.8□□□□□ -1.64
POLR1B-202ENST00000333990 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
POLR1B-202ENST00000333990 KMT2AQ03164 3969 aa4.76□□□□□ -1.65
POLR1B-202ENST00000333990 MT2AP02795 61 aa4.74□□□□□ -1.65
POLR1B-202ENST00000333990 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
POLR1B-202ENST00000333990 RYR2Q92736 4967 aa4.72□□□□□ -1.65
POLR1B-202ENST00000333990 KRTAP12-3P60328 96 aa4.69□□□□□ -1.66
POLR1B-202ENST00000333990 SPRR2GQ9BYE4 73 aa4.69□□□□□ -1.66
POLR1B-202ENST00000333990 BIRC6Q9NR09 4857 aa4.68□□□□□ -1.66
POLR1B-202ENST00000333990 DNAH6Q9C0G6 4158 aa4.68□□□□□ -1.66
POLR1B-202ENST00000333990 LYSTQ99698 3801 aa4.68□□□□□ -1.66
POLR1B-202ENST00000333990 HECTD4Q9Y4D8 3996 aa4.64□□□□□ -1.67
POLR1B-202ENST00000333990 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
POLR1B-202ENST00000333990 DNAH7Q8WXX0 4024 aa4.64□□□□□ -1.67
POLR1B-202ENST00000333990 MT1FP04733 61 aa4.63□□□□□ -1.67
POLR1B-202ENST00000333990 HERC2O95714 4834 aa4.63□□□□□ -1.67
POLR1B-202ENST00000333990 KRTAP8-1Q8IUC2 63 aa4.62□□□□□ -1.67
POLR1B-202ENST00000333990 VPS13BQ7Z7G8 4022 aa4.62□□□□□ -1.67
POLR1B-202ENST00000333990 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
POLR1B-202ENST00000333990 FRAS1Q86XX4 4008 aa4.6□□□□□ -1.67
POLR1B-202ENST00000333990 FAT3Q8TDW7 4589 aa4.53□□□□□ -1.68
POLR1B-202ENST00000333990 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
POLR1B-202ENST00000333990 MYCBP2O75592 4640 aa4.51□□□□□ -1.69
POLR1B-202ENST00000333990 HYDINQ4G0P3 5121 aa4.48□□□□□ -1.69
POLR1B-202ENST00000333990 CRCT1Q9UGL9 99 aa4.47□□□□□ -1.69
POLR1B-202ENST00000333990 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
POLR1B-202ENST00000333990 HSPG2P98160 4391 aa4.42□□□□□ -1.7
POLR1B-202ENST00000333990 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
POLR1B-202ENST00000333990 HERC1Q15751 4861 aa4.4□□□□□ -1.71
POLR1B-202ENST00000333990 PCLOQ9Y6V0 5065 aa4.39□□□□□ -1.71
POLR1B-202ENST00000333990 PKD1P98161 4303 aa4.38□□□□□ -1.71
POLR1B-202ENST00000333990 LCE2CQ5TA81 110 aa4.38□□□□□ -1.71
POLR1B-202ENST00000333990 KMT2CQ8NEZ4 4911 aaKnown RBP4.37□□□□□ -1.71
POLR1B-202ENST00000333990 PKHD1P08F94 4074 aa4.37□□□□□ -1.71
POLR1B-202ENST00000333990 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
POLR1B-202ENST00000333990 LRP2P98164 4655 aa4.34□□□□□ -1.71
POLR1B-202ENST00000333990 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.72
POLR1B-202ENST00000333990 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
POLR1B-202ENST00000333990 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
POLR1B-202ENST00000333990 INE1O15225 51 aa4.26□□□□□ -1.73
POLR1B-202ENST00000333990 MT1BP07438 61 aa4.26□□□□□ -1.73
POLR1B-202ENST00000333990 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
POLR1B-202ENST00000333990 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
POLR1B-202ENST00000333990 PKHD1L1Q86WI1 4243 aa4.24□□□□□ -1.73
POLR1B-202ENST00000333990 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
POLR1B-202ENST00000333990 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.74
POLR1B-202ENST00000333990 EPPK1P58107 5090 aaKnown RBP4.21□□□□□ -1.74
POLR1B-202ENST00000333990 MT1XP80297 61 aa4.21□□□□□ -1.74
POLR1B-202ENST00000333990 ABCA13Q86UQ4 5058 aa4.19□□□□□ -1.74
POLR1B-202ENST00000333990 TNXBP22105 4242 aa4.14□□□□□ -1.75
POLR1B-202ENST00000333990 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
POLR1B-202ENST00000333990 SPRR2EP22531 72 aa4.09□□□□□ -1.76
POLR1B-202ENST00000333990 SPRR2BP35325 72 aa4.09□□□□□ -1.76
POLR1B-202ENST00000333990 SPRR2AP35326 72 aa4.09□□□□□ -1.76
POLR1B-202ENST00000333990 LCE2BO14633 110 aa4.07□□□□□ -1.76
POLR1B-202ENST00000333990 LPAP08519 4548 aa4.06□□□□□ -1.76
POLR1B-202ENST00000333990 LCE2AQ5TA79 106 aaPredicted RBP4.05□□□□□ -1.76
POLR1B-202ENST00000333990 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
POLR1B-202ENST00000333990 MT1GP13640 62 aa4□□□□□ -1.77
POLR1B-202ENST00000333990 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
POLR1B-202ENST00000333990 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
POLR1B-202ENST00000333990 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
POLR1B-202ENST00000333990 KRTAP4-8A0A0G2JLE6 195 aa3.97□□□□□ -1.77
POLR1B-202ENST00000333990 KRTAP4-8Q9BYQ9 185 aa3.97□□□□□ -1.77
POLR1B-202ENST00000333990 KRTAP19-6Q3LI70 58 aa3.97□□□□□ -1.77
POLR1B-202ENST00000333990 SPRR2DP22532 72 aa3.96□□□□□ -1.77
POLR1B-202ENST00000333990 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.78
POLR1B-202ENST00000333990 RNF213Q63HN8 5207 aa3.95□□□□□ -1.78
POLR1B-202ENST00000333990 FAT4Q6V0I7 4981 aa3.93□□□□□ -1.78
POLR1B-202ENST00000333990 HMCN2Q8NDA2 5059 aa3.87□□□□□ -1.79
POLR1B-202ENST00000333990 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
POLR1B-202ENST00000333990 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
POLR1B-202ENST00000333990 MT1EP04732 61 aa3.8□□□□□ -1.8
POLR1B-202ENST00000333990 KRTAP9-6A0A140TA67 174 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 192.4 ms