RNA–Protein interactions for RNA: ENST00000330276.4

SV2B-201, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SV2B, Length 11,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-201ENST00000330276 KRTAP3-2Q9BYR7 98 aa2.6□□□□□ -1.99
SV2B-201ENST00000330276 ANK2Q01484 3957 aa2.59□□□□□ -1.99
SV2B-201ENST00000330276 KRTAP12-3P60328 96 aa2.59□□□□□ -2
SV2B-201ENST00000330276 KRTAP3-3Q9BYR6 98 aa2.56□□□□□ -2
SV2B-201ENST00000330276 KRTAP10-5P60370 271 aa2.55□□□□□ -2
SV2B-201ENST00000330276 ANK3Q12955 4377 aaKnown RBP2.54□□□□□ -2
SV2B-201ENST00000330276 DNAH6Q9C0G6 4158 aa2.54□□□□□ -2
SV2B-201ENST00000330276 LCE3AQ5TA76 89 aa2.54□□□□□ -2
SV2B-201ENST00000330276 FRAS1Q86XX4 4008 aa2.52□□□□□ -2.01
SV2B-201ENST00000330276 KMT2AQ03164 3969 aa2.51□□□□□ -2.01
SV2B-201ENST00000330276 HUWE1Q7Z6Z7 4374 aaKnown RBP2.49□□□□□ -2.01
SV2B-201ENST00000330276 DNAH1Q9P2D7 4330 aa2.48□□□□□ -2.01
SV2B-201ENST00000330276 VPS13BQ7Z7G8 4022 aa2.44□□□□□ -2.02
SV2B-201ENST00000330276 PRKDCP78527 4128 aaKnown RBP2.41□□□□□ -2.02
SV2B-201ENST00000330276 LORP23490 312 aaPredicted RBP2.4□□□□□ -2.02
SV2B-201ENST00000330276 VPS13DQ5THJ4 4388 aa2.4□□□□□ -2.03
SV2B-201ENST00000330276 FLGP20930 4061 aaPredicted RBP2.37□□□□□ -2.03
SV2B-201ENST00000330276 DNAH8Q96JB1 4490 aa2.36□□□□□ -2.03
SV2B-201ENST00000330276 KRTAP4-5Q9BYR2 181 aa2.36□□□□□ -2.03
SV2B-201ENST00000330276 KRTAP19-4Q3LI73 84 aa2.35□□□□□ -2.03
SV2B-201ENST00000330276 DNAH10Q8IVF4 4471 aa2.35□□□□□ -2.03
SV2B-201ENST00000330276 DNAH17Q9UFH2 4485 aa2.34□□□□□ -2.03
SV2B-201ENST00000330276 DNAH11Q96DT5 4516 aa2.34□□□□□ -2.04
SV2B-201ENST00000330276 KRTAP8-1Q8IUC2 63 aa2.31□□□□□ -2.04
SV2B-201ENST00000330276 MT1HL1P0DM35 61 aa2.3□□□□□ -2.04
SV2B-201ENST00000330276 DYNC2H1Q8NCM8 4307 aaKnown RBP2.28□□□□□ -2.04
SV2B-201ENST00000330276 LCE3CQ5T5A8 94 aa2.25□□□□□ -2.05
SV2B-201ENST00000330276 DNAH9Q9NYC9 4486 aa2.23□□□□□ -2.05
SV2B-201ENST00000330276 KRTAP10-4P60372 401 aaPredicted RBP2.23□□□□□ -2.05
SV2B-201ENST00000330276 KRTAP19-5Q3LI72 72 aa2.22□□□□□ -2.05
SV2B-201ENST00000330276 FAT2Q9NYQ8 4349 aa2.22□□□□□ -2.05
SV2B-201ENST00000330276 KRTAP10-7P60409 375 aaPredicted RBP2.21□□□□□ -2.06
SV2B-201ENST00000330276 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
SV2B-201ENST00000330276 SPRR2FQ96RM1 72 aa2.18□□□□□ -2.06
SV2B-201ENST00000330276 SPRR2GQ9BYE4 73 aa2.17□□□□□ -2.06
SV2B-201ENST00000330276 PKHD1L1Q86WI1 4243 aa2.16□□□□□ -2.06
SV2B-201ENST00000330276 LCE3BQ5TA77 95 aa2.16□□□□□ -2.06
SV2B-201ENST00000330276 DNAH5Q8TE73 4624 aa2.14□□□□□ -2.07
SV2B-201ENST00000330276 PKHD1P08F94 4074 aa2.14□□□□□ -2.07
SV2B-201ENST00000330276 KRTAP4-1Q9BYQ7 146 aa2.1□□□□□ -2.07
SV2B-201ENST00000330276 LRP1Q07954 4544 aaKnown RBP2.1□□□□□ -2.07
SV2B-201ENST00000330276 PLECQ15149 4684 aaKnown RBP2.09□□□□□ -2.07
SV2B-201ENST00000330276 APOBP04114 4563 aaKnown RBP2.09□□□□□ -2.08
SV2B-201ENST00000330276 PKD1P98161 4303 aa2.07□□□□□ -2.08
SV2B-201ENST00000330276 FAT1Q14517 4588 aa2.07□□□□□ -2.08
SV2B-201ENST00000330276 MT1HP80294 61 aa2.07□□□□□ -2.08
SV2B-201ENST00000330276 SPRR5A0A1B0GTR4 108 aa2.07□□□□□ -2.08
SV2B-201ENST00000330276 MT3P25713 68 aa2.06□□□□□ -2.08
SV2B-201ENST00000330276 TNXBP22105 4242 aa2.06□□□□□ -2.08
SV2B-201ENST00000330276 SPRR2EP22531 72 aa2.04□□□□□ -2.08
SV2B-201ENST00000330276 SPRR2BP35325 72 aa2.04□□□□□ -2.08
SV2B-201ENST00000330276 SPRR2AP35326 72 aa2.04□□□□□ -2.08
SV2B-201ENST00000330276 HSPG2P98160 4391 aa2.04□□□□□ -2.08
SV2B-201ENST00000330276 STARD9Q9P2P6 4700 aa2.04□□□□□ -2.08
SV2B-201ENST00000330276 DYNC1H1Q14204 4646 aaKnown RBP2.03□□□□□ -2.08
SV2B-201ENST00000330276 MT1GP13640 62 aa2.03□□□□□ -2.08
SV2B-201ENST00000330276 SACSQ9NZJ4 4579 aa2.03□□□□□ -2.08
SV2B-201ENST00000330276 MT2AP02795 61 aa2.03□□□□□ -2.09
SV2B-201ENST00000330276 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
SV2B-201ENST00000330276 MT1FP04733 61 aa2.01□□□□□ -2.09
SV2B-201ENST00000330276 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
SV2B-201ENST00000330276 RYR1P21817 5038 aa1.98□□□□□ -2.09
SV2B-201ENST00000330276 PRM1P04553 51 aa1.97□□□□□ -2.09
SV2B-201ENST00000330276 LRP1BQ9NZR2 4599 aa1.97□□□□□ -2.09
SV2B-201ENST00000330276 SPRR2DP22532 72 aa1.96□□□□□ -2.1
SV2B-201ENST00000330276 LCE2BO14633 110 aa1.94□□□□□ -2.1
SV2B-201ENST00000330276 MT1XP80297 61 aa1.92□□□□□ -2.1
SV2B-201ENST00000330276 KRTAP19-8Q3LI54 63 aa1.92□□□□□ -2.1
SV2B-201ENST00000330276 FAT3Q8TDW7 4589 aa1.91□□□□□ -2.1
SV2B-201ENST00000330276 KRTAP4-8A0A0G2JLE6 195 aa1.88□□□□□ -2.11
SV2B-201ENST00000330276 KRTAP4-8Q9BYQ9 185 aa1.88□□□□□ -2.11
SV2B-201ENST00000330276 MYCBP2O75592 4640 aa1.87□□□□□ -2.11
SV2B-201ENST00000330276 DNHD1Q96M86 4753 aa1.87□□□□□ -2.11
SV2B-201ENST00000330276 KRTAP4-7Q9BYR0 210 aa1.86□□□□□ -2.11
SV2B-201ENST00000330276 MT4P47944 62 aa1.86□□□□□ -2.11
SV2B-201ENST00000330276 KRTAP19-1Q8IUB9 90 aa1.85□□□□□ -2.11
SV2B-201ENST00000330276 LCE2CQ5TA81 110 aa1.83□□□□□ -2.12
SV2B-201ENST00000330276 LOC100996750A0A140TA64 210 aa1.82□□□□□ -2.12
SV2B-201ENST00000330276 MUC17Q685J3 4493 aa1.82□□□□□ -2.12
SV2B-201ENST00000330276 LCE2DQ5TA82 110 aaPredicted RBP1.81□□□□□ -2.12
SV2B-201ENST00000330276 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
SV2B-201ENST00000330276 MT1LQ93083 61 aa1.81□□□□□ -2.12
SV2B-201ENST00000330276 LPAP08519 4548 aa1.79□□□□□ -2.12
SV2B-201ENST00000330276 MT1BP07438 61 aa1.78□□□□□ -2.12
SV2B-201ENST00000330276 LCE1DQ5T752 114 aa1.78□□□□□ -2.12
SV2B-201ENST00000330276 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
SV2B-201ENST00000330276 KRTAP9-8Q9BYQ0 159 aa1.76□□□□□ -2.13
SV2B-201ENST00000330276 KRTAP4-9Q9BYQ8 210 aa1.75□□□□□ -2.13
SV2B-201ENST00000330276 MT1EP04732 61 aa1.74□□□□□ -2.13
SV2B-201ENST00000330276 KRTAP4-3Q9BYR4 195 aa1.74□□□□□ -2.13
SV2B-201ENST00000330276 KRTAP17-1Q9BYP8 105 aa1.72□□□□□ -2.13
SV2B-201ENST00000330276 KRTAP9-3Q9BYQ3 159 aa1.7□□□□□ -2.14
SV2B-201ENST00000330276 KRTAP2-3P0C7H8 128 aa1.7□□□□□ -2.14
SV2B-201ENST00000330276 KRTAP2-4Q9BYR9 128 aa1.7□□□□□ -2.14
SV2B-201ENST00000330276 KRTAP2-1Q9BYU5 128 aa1.7□□□□□ -2.14
SV2B-201ENST00000330276 PCLOQ9Y6V0 5065 aa1.69□□□□□ -2.14
SV2B-201ENST00000330276 MT1MQ8N339 61 aa1.68□□□□□ -2.14
SV2B-201ENST00000330276 LCE5AQ5TCM9 118 aa1.68□□□□□ -2.14
SV2B-201ENST00000330276 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
SV2B-201ENST00000330276 RYR3Q15413 4870 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms