RNA–Protein interactions for RNA: ENST00000323578.12

CHID1-201, Transcript of chitinase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHID1, Length 3,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-201ENST00000323578 COX6B2Q6YFQ2 88 aa8.45□□□□□ -1.06
CHID1-201ENST00000323578 KRTAP10-4P60372 401 aaPredicted RBP8.44□□□□□ -1.06
CHID1-201ENST00000323578 A0A1B0GVY2 172 aa8.44□□□□□ -1.06
CHID1-201ENST00000323578 FAT3Q8TDW7 4589 aa8.41□□□□□ -1.06
CHID1-201ENST00000323578 Q5VSD8 79 aa8.4□□□□□ -1.07
CHID1-201ENST00000323578 K7ERS5 55 aa8.39□□□□□ -1.07
CHID1-201ENST00000323578 HSPG2P98160 4391 aa8.37□□□□□ -1.07
CHID1-201ENST00000323578 KRTAP10-8P60410 259 aa8.36□□□□□ -1.07
CHID1-201ENST00000323578 PKHD1L1Q86WI1 4243 aa8.32□□□□□ -1.08
CHID1-201ENST00000323578 KIAA1109Q2LD37 5005 aa8.3□□□□□ -1.08
CHID1-201ENST00000323578 RYR2Q92736 4967 aa8.3□□□□□ -1.08
CHID1-201ENST00000323578 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
CHID1-201ENST00000323578 XP32Q5T750 250 aa8.26□□□□□ -1.09
CHID1-201ENST00000323578 S4R3F8 94 aa8.26□□□□□ -1.09
CHID1-201ENST00000323578 RPL37P61927 97 aaKnown RBP8.22□□□□□ -1.09
CHID1-201ENST00000323578 LUZP6Q538Z0 58 aa8.21□□□□□ -1.1
CHID1-201ENST00000323578 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
CHID1-201ENST00000323578 KRTAP17-1Q9BYP8 105 aa8.19□□□□□ -1.1
CHID1-201ENST00000323578 RYR3Q15413 4870 aa8.18□□□□□ -1.1
CHID1-201ENST00000323578 KRTAP10-6P60371 365 aaPredicted RBP8.18□□□□□ -1.1
CHID1-201ENST00000323578 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
CHID1-201ENST00000323578 LRP2P98164 4655 aa8.17□□□□□ -1.1
CHID1-201ENST00000323578 LPAP08519 4548 aa8.17□□□□□ -1.1
CHID1-201ENST00000323578 RYR1P21817 5038 aa8.15□□□□□ -1.1
CHID1-201ENST00000323578 TNXBP22105 4242 aa8.1□□□□□ -1.11
CHID1-201ENST00000323578 KRTAP21-3Q3LHN1 58 aa8.1□□□□□ -1.11
CHID1-201ENST00000323578 KRTAP3-2Q9BYR7 98 aa8.09□□□□□ -1.11
CHID1-201ENST00000323578 TPRXLQ17RH7 258 aa8.07□□□□□ -1.12
CHID1-201ENST00000323578 KRTAP15-1Q3LI76 137 aa8.06□□□□□ -1.12
CHID1-201ENST00000323578 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
CHID1-201ENST00000323578 MT1HL1P0DM35 61 aa7.97□□□□□ -1.13
CHID1-201ENST00000323578 ABCA13Q86UQ4 5058 aa7.95□□□□□ -1.14
CHID1-201ENST00000323578 EPPK1P58107 5090 aaKnown RBP7.92□□□□□ -1.14
CHID1-201ENST00000323578 KRTAP4-5Q9BYR2 181 aa7.89□□□□□ -1.15
CHID1-201ENST00000323578 M0QZ58 72 aa7.88□□□□□ -1.15
CHID1-201ENST00000323578 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
CHID1-201ENST00000323578 R4GN34 69 aa7.82□□□□□ -1.16
CHID1-201ENST00000323578 MUC2Q02817 5179 aa7.75□□□□□ -1.17
CHID1-201ENST00000323578 J3QL48 77 aa7.74□□□□□ -1.17
CHID1-201ENST00000323578 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
CHID1-201ENST00000323578 SEC61BP60468 96 aaKnown RBP7.66□□□□□ -1.18
CHID1-201ENST00000323578 KRTAP4-1Q9BYQ7 146 aa7.6□□□□□ -1.19
CHID1-201ENST00000323578 HERC2O95714 4834 aa7.54□□□□□ -1.2
CHID1-201ENST00000323578 CAMK2N1Q7Z7J9 78 aa7.54□□□□□ -1.2
CHID1-201ENST00000323578 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
CHID1-201ENST00000323578 MUC17Q685J3 4493 aa7.36□□□□□ -1.23
CHID1-201ENST00000323578 FAT4Q6V0I7 4981 aa7.35□□□□□ -1.23
CHID1-201ENST00000323578 HERC1Q15751 4861 aa7.34□□□□□ -1.23
CHID1-201ENST00000323578 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
CHID1-201ENST00000323578 M0R2T5 61 aa7.21□□□□□ -1.25
CHID1-201ENST00000323578 PCLOQ9Y6V0 5065 aa7.17□□□□□ -1.26
CHID1-201ENST00000323578 KRTAP19-2Q3LHN2 52 aa7.13□□□□□ -1.27
CHID1-201ENST00000323578 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
CHID1-201ENST00000323578 TNP1P09430 55 aa7.03□□□□□ -1.28
CHID1-201ENST00000323578 UBR4Q5T4S7 5183 aa7□□□□□ -1.29
CHID1-201ENST00000323578 BIRC6Q9NR09 4857 aa6.97□□□□□ -1.29
CHID1-201ENST00000323578 PP632Q6XCG6 107 aa6.94□□□□□ -1.3
CHID1-201ENST00000323578 HMCN2Q8NDA2 5059 aa6.92□□□□□ -1.3
CHID1-201ENST00000323578 KRTAP10-10P60014 251 aa6.89□□□□□ -1.31
CHID1-201ENST00000323578 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
CHID1-201ENST00000323578 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
CHID1-201ENST00000323578 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
CHID1-201ENST00000323578 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
CHID1-201ENST00000323578 MT1HP80294 61 aa6.69□□□□□ -1.34
CHID1-201ENST00000323578 MT1FP04733 61 aa6.68□□□□□ -1.34
CHID1-201ENST00000323578 MT2AP02795 61 aa6.63□□□□□ -1.35
CHID1-201ENST00000323578 SPRR2GQ9BYE4 73 aa6.63□□□□□ -1.35
CHID1-201ENST00000323578 USH2AO75445 5202 aa6.53□□□□□ -1.36
CHID1-201ENST00000323578 INE1O15225 51 aa6.52□□□□□ -1.37
CHID1-201ENST00000323578 KRTAP9-8Q9BYQ0 159 aa6.49□□□□□ -1.37
CHID1-201ENST00000323578 KMT2DO14686 5537 aa6.43□□□□□ -1.38
CHID1-201ENST00000323578 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
CHID1-201ENST00000323578 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
CHID1-201ENST00000323578 MT1BP07438 61 aa6.37□□□□□ -1.39
CHID1-201ENST00000323578 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
CHID1-201ENST00000323578 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
CHID1-201ENST00000323578 MT1XP80297 61 aa6.35□□□□□ -1.39
CHID1-201ENST00000323578 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
CHID1-201ENST00000323578 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.39
CHID1-201ENST00000323578 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
CHID1-201ENST00000323578 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
CHID1-201ENST00000323578 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
CHID1-201ENST00000323578 KRTAP9-3Q9BYQ3 159 aa6.18□□□□□ -1.42
CHID1-201ENST00000323578 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
CHID1-201ENST00000323578 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
CHID1-201ENST00000323578 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.44
CHID1-201ENST00000323578 LCE2BO14633 110 aa6.07□□□□□ -1.44
CHID1-201ENST00000323578 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
CHID1-201ENST00000323578 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
CHID1-201ENST00000323578 DSTQ03001 7570 aaKnown RBP5.76□□□□□ -1.49
CHID1-201ENST00000323578 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
CHID1-201ENST00000323578 SSPOA2VEC9 5147 aa5.68□□□□□ -1.5
CHID1-201ENST00000323578 LCE2AQ5TA79 106 aaPredicted RBP5.67□□□□□ -1.5
CHID1-201ENST00000323578 CRCT1Q9UGL9 99 aa5.66□□□□□ -1.5
CHID1-201ENST00000323578 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
CHID1-201ENST00000323578 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
CHID1-201ENST00000323578 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
CHID1-201ENST00000323578 KRTAP4-3Q9BYR4 195 aa5.53□□□□□ -1.52
CHID1-201ENST00000323578 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
CHID1-201ENST00000323578 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms