RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 KRTAP10-4P60372 401 aaPredicted RBP6.28□□□□□ -1.4
DNMT3A-202ENST00000321117 ALMS1Q8TCU4 4167 aa6.27□□□□□ -1.4
DNMT3A-202ENST00000321117 CMYA5Q8N3K9 4069 aa6.27□□□□□ -1.41
DNMT3A-202ENST00000321117 TNP1P09430 55 aa6.24□□□□□ -1.41
DNMT3A-202ENST00000321117 DNAH2Q9P225 4427 aa6.22□□□□□ -1.41
DNMT3A-202ENST00000321117 DNHD1Q96M86 4753 aa6.22□□□□□ -1.41
DNMT3A-202ENST00000321117 LRP1BQ9NZR2 4599 aa6.19□□□□□ -1.42
DNMT3A-202ENST00000321117 KMT2AQ03164 3969 aa6.19□□□□□ -1.42
DNMT3A-202ENST00000321117 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
DNMT3A-202ENST00000321117 FRAS1Q86XX4 4008 aa6.18□□□□□ -1.42
DNMT3A-202ENST00000321117 DNAH7Q8WXX0 4024 aa6.16□□□□□ -1.42
DNMT3A-202ENST00000321117 PRKDCP78527 4128 aaKnown RBP6.15□□□□□ -1.42
DNMT3A-202ENST00000321117 DNAH5Q8TE73 4624 aa6.14□□□□□ -1.43
DNMT3A-202ENST00000321117 HECTD4Q9Y4D8 3996 aa6.13□□□□□ -1.43
DNMT3A-202ENST00000321117 DYNC2H1Q8NCM8 4307 aaKnown RBP6.12□□□□□ -1.43
DNMT3A-202ENST00000321117 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
DNMT3A-202ENST00000321117 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
DNMT3A-202ENST00000321117 VPS13BQ7Z7G8 4022 aa6.03□□□□□ -1.44
DNMT3A-202ENST00000321117 DNAH6Q9C0G6 4158 aa6.02□□□□□ -1.45
DNMT3A-202ENST00000321117 FAT1Q14517 4588 aa6.01□□□□□ -1.45
DNMT3A-202ENST00000321117 DYNC1H1Q14204 4646 aaKnown RBP5.97□□□□□ -1.45
DNMT3A-202ENST00000321117 SACSQ9NZJ4 4579 aa5.92□□□□□ -1.46
DNMT3A-202ENST00000321117 FAT2Q9NYQ8 4349 aa5.82□□□□□ -1.48
DNMT3A-202ENST00000321117 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
DNMT3A-202ENST00000321117 MYCBP2O75592 4640 aa5.75□□□□□ -1.49
DNMT3A-202ENST00000321117 HYDINQ4G0P3 5121 aa5.74□□□□□ -1.49
DNMT3A-202ENST00000321117 PKHD1P08F94 4074 aa5.7□□□□□ -1.5
DNMT3A-202ENST00000321117 KRTAP4-5Q9BYR2 181 aa5.69□□□□□ -1.5
DNMT3A-202ENST00000321117 LRP1Q07954 4544 aaKnown RBP5.68□□□□□ -1.5
DNMT3A-202ENST00000321117 APOBP04114 4563 aaKnown RBP5.68□□□□□ -1.5
DNMT3A-202ENST00000321117 KRTAP10-10P60014 251 aa5.67□□□□□ -1.5
DNMT3A-202ENST00000321117 PKD1P98161 4303 aa5.67□□□□□ -1.5
DNMT3A-202ENST00000321117 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.51
DNMT3A-202ENST00000321117 FAT3Q8TDW7 4589 aa5.6□□□□□ -1.51
DNMT3A-202ENST00000321117 KRTAP4-1Q9BYQ7 146 aa5.57□□□□□ -1.52
DNMT3A-202ENST00000321117 RYR1P21817 5038 aa5.56□□□□□ -1.52
DNMT3A-202ENST00000321117 KIAA1109Q2LD37 5005 aa5.54□□□□□ -1.52
DNMT3A-202ENST00000321117 KMT2CQ8NEZ4 4911 aaKnown RBP5.53□□□□□ -1.52
DNMT3A-202ENST00000321117 KRTAP17-1Q9BYP8 105 aa5.52□□□□□ -1.53
DNMT3A-202ENST00000321117 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
DNMT3A-202ENST00000321117 PKHD1L1Q86WI1 4243 aa5.45□□□□□ -1.54
DNMT3A-202ENST00000321117 LRP2P98164 4655 aa5.45□□□□□ -1.54
DNMT3A-202ENST00000321117 RYR2Q92736 4967 aa5.43□□□□□ -1.54
DNMT3A-202ENST00000321117 RYR3Q15413 4870 aa5.43□□□□□ -1.54
DNMT3A-202ENST00000321117 HSPG2P98160 4391 aa5.42□□□□□ -1.54
DNMT3A-202ENST00000321117 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
DNMT3A-202ENST00000321117 INE1O15225 51 aa5.34□□□□□ -1.55
DNMT3A-202ENST00000321117 TNXBP22105 4242 aa5.31□□□□□ -1.56
DNMT3A-202ENST00000321117 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
DNMT3A-202ENST00000321117 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
DNMT3A-202ENST00000321117 SPRR2GQ9BYE4 73 aa5.22□□□□□ -1.57
DNMT3A-202ENST00000321117 EPPK1P58107 5090 aaKnown RBP5.22□□□□□ -1.57
DNMT3A-202ENST00000321117 LPAP08519 4548 aa5.2□□□□□ -1.58
DNMT3A-202ENST00000321117 MT1HP80294 61 aa5.09□□□□□ -1.59
DNMT3A-202ENST00000321117 KRTAP19-2Q3LHN2 52 aa5.09□□□□□ -1.59
DNMT3A-202ENST00000321117 MT2AP02795 61 aa5.09□□□□□ -1.59
DNMT3A-202ENST00000321117 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
DNMT3A-202ENST00000321117 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
DNMT3A-202ENST00000321117 MT1FP04733 61 aa5.06□□□□□ -1.6
DNMT3A-202ENST00000321117 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
DNMT3A-202ENST00000321117 HERC2O95714 4834 aa5.04□□□□□ -1.6
DNMT3A-202ENST00000321117 BIRC6Q9NR09 4857 aa5□□□□□ -1.61
DNMT3A-202ENST00000321117 MUC17Q685J3 4493 aa4.94□□□□□ -1.62
DNMT3A-202ENST00000321117 LCE2DQ5TA82 110 aaPredicted RBP4.94□□□□□ -1.62
DNMT3A-202ENST00000321117 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
DNMT3A-202ENST00000321117 ABCA13Q86UQ4 5058 aa4.91□□□□□ -1.62
DNMT3A-202ENST00000321117 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
DNMT3A-202ENST00000321117 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.62
DNMT3A-202ENST00000321117 PCLOQ9Y6V0 5065 aa4.87□□□□□ -1.63
DNMT3A-202ENST00000321117 CRCT1Q9UGL9 99 aa4.85□□□□□ -1.63
DNMT3A-202ENST00000321117 MT1XP80297 61 aa4.84□□□□□ -1.63
DNMT3A-202ENST00000321117 KRTAP10-5P60370 271 aa4.83□□□□□ -1.64
DNMT3A-202ENST00000321117 HERC1Q15751 4861 aa4.82□□□□□ -1.64
DNMT3A-202ENST00000321117 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
DNMT3A-202ENST00000321117 MT1BP07438 61 aa4.82□□□□□ -1.64
DNMT3A-202ENST00000321117 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
DNMT3A-202ENST00000321117 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
DNMT3A-202ENST00000321117 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
DNMT3A-202ENST00000321117 MUC2Q02817 5179 aa4.71□□□□□ -1.66
DNMT3A-202ENST00000321117 KRTAP9-3Q9BYQ3 159 aa4.63□□□□□ -1.67
DNMT3A-202ENST00000321117 UBR4Q5T4S7 5183 aa4.6□□□□□ -1.67
DNMT3A-202ENST00000321117 RNF213Q63HN8 5207 aa4.6□□□□□ -1.67
DNMT3A-202ENST00000321117 HMCN2Q8NDA2 5059 aa4.58□□□□□ -1.68
DNMT3A-202ENST00000321117 FAT4Q6V0I7 4981 aa4.57□□□□□ -1.68
DNMT3A-202ENST00000321117 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
DNMT3A-202ENST00000321117 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
DNMT3A-202ENST00000321117 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
DNMT3A-202ENST00000321117 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
DNMT3A-202ENST00000321117 LCE2BO14633 110 aa4.43□□□□□ -1.7
DNMT3A-202ENST00000321117 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
DNMT3A-202ENST00000321117 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
DNMT3A-202ENST00000321117 MT1LQ93083 61 aa4.28□□□□□ -1.72
DNMT3A-202ENST00000321117 MT1EP04732 61 aa4.24□□□□□ -1.73
DNMT3A-202ENST00000321117 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
DNMT3A-202ENST00000321117 MT1GP13640 62 aa4.23□□□□□ -1.73
DNMT3A-202ENST00000321117 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
DNMT3A-202ENST00000321117 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
DNMT3A-202ENST00000321117 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
DNMT3A-202ENST00000321117 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
DNMT3A-202ENST00000321117 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms