RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 DNAH11Q96DT5 4516 aa3.87□□□□□ -1.79
SSBP2-201ENST00000320672 DNAH10Q8IVF4 4471 aa3.85□□□□□ -1.79
SSBP2-201ENST00000320672 KRTAP10-4P60372 401 aaPredicted RBP3.85□□□□□ -1.79
SSBP2-201ENST00000320672 DNAH9Q9NYC9 4486 aa3.84□□□□□ -1.79
SSBP2-201ENST00000320672 FAT1Q14517 4588 aa3.82□□□□□ -1.8
SSBP2-201ENST00000320672 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
SSBP2-201ENST00000320672 LRP1BQ9NZR2 4599 aa3.82□□□□□ -1.8
SSBP2-201ENST00000320672 RYR1P21817 5038 aa3.8□□□□□ -1.8
SSBP2-201ENST00000320672 COL7A1Q02388 2944 aa3.79□□□□□ -1.8
SSBP2-201ENST00000320672 DNAH8Q96JB1 4490 aa3.79□□□□□ -1.8
SSBP2-201ENST00000320672 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
SSBP2-201ENST00000320672 ZNF469Q96JG9 3925 aaPredicted RBP3.78□□□□□ -1.8
SSBP2-201ENST00000320672 KRTAP4-1Q9BYQ7 146 aa3.76□□□□□ -1.81
SSBP2-201ENST00000320672 DNAH1Q9P2D7 4330 aa3.75□□□□□ -1.81
SSBP2-201ENST00000320672 KIAA1109Q2LD37 5005 aa3.74□□□□□ -1.81
SSBP2-201ENST00000320672 DNAH17Q9UFH2 4485 aa3.73□□□□□ -1.81
SSBP2-201ENST00000320672 SACSQ9NZJ4 4579 aa3.73□□□□□ -1.81
SSBP2-201ENST00000320672 STARD9Q9P2P6 4700 aa3.72□□□□□ -1.81
SSBP2-201ENST00000320672 AKAP9Q99996 3911 aa3.68□□□□□ -1.82
SSBP2-201ENST00000320672 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
SSBP2-201ENST00000320672 VPS13DQ5THJ4 4388 aa3.65□□□□□ -1.82
SSBP2-201ENST00000320672 APOBP04114 4563 aaKnown RBP3.63□□□□□ -1.83
SSBP2-201ENST00000320672 DNAH2Q9P225 4427 aa3.61□□□□□ -1.83
SSBP2-201ENST00000320672 RYR2Q92736 4967 aa3.59□□□□□ -1.83
SSBP2-201ENST00000320672 MYCBP2O75592 4640 aa3.58□□□□□ -1.84
SSBP2-201ENST00000320672 RYR3Q15413 4870 aa3.58□□□□□ -1.84
SSBP2-201ENST00000320672 MT1HP80294 61 aa3.57□□□□□ -1.84
SSBP2-201ENST00000320672 HYDINQ4G0P3 5121 aa3.56□□□□□ -1.84
SSBP2-201ENST00000320672 ALMS1Q8TCU4 4167 aa3.54□□□□□ -1.84
SSBP2-201ENST00000320672 KRTAP17-1Q9BYP8 105 aa3.54□□□□□ -1.84
SSBP2-201ENST00000320672 INE1O15225 51 aa3.53□□□□□ -1.84
SSBP2-201ENST00000320672 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
SSBP2-201ENST00000320672 MT2AP02795 61 aa3.5□□□□□ -1.85
SSBP2-201ENST00000320672 MT1FP04733 61 aa3.5□□□□□ -1.85
SSBP2-201ENST00000320672 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
SSBP2-201ENST00000320672 FAT3Q8TDW7 4589 aa3.46□□□□□ -1.86
SSBP2-201ENST00000320672 LRP1Q07954 4544 aaKnown RBP3.46□□□□□ -1.86
SSBP2-201ENST00000320672 DYNC2H1Q8NCM8 4307 aaKnown RBP3.45□□□□□ -1.86
SSBP2-201ENST00000320672 ANK2Q01484 3957 aa3.4□□□□□ -1.87
SSBP2-201ENST00000320672 HERC2O95714 4834 aa3.38□□□□□ -1.87
SSBP2-201ENST00000320672 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
SSBP2-201ENST00000320672 ABCA13Q86UQ4 5058 aa3.37□□□□□ -1.87
SSBP2-201ENST00000320672 PRKDCP78527 4128 aaKnown RBP3.36□□□□□ -1.87
SSBP2-201ENST00000320672 LPAP08519 4548 aa3.35□□□□□ -1.87
SSBP2-201ENST00000320672 FAT2Q9NYQ8 4349 aa3.34□□□□□ -1.87
SSBP2-201ENST00000320672 LCE3BQ5TA77 95 aa3.34□□□□□ -1.87
SSBP2-201ENST00000320672 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
SSBP2-201ENST00000320672 KRTAP4-8Q9BYQ9 185 aa3.33□□□□□ -1.88
SSBP2-201ENST00000320672 EPPK1P58107 5090 aaKnown RBP3.33□□□□□ -1.88
SSBP2-201ENST00000320672 BIRC6Q9NR09 4857 aa3.33□□□□□ -1.88
SSBP2-201ENST00000320672 KMT2CQ8NEZ4 4911 aaKnown RBP3.33□□□□□ -1.88
SSBP2-201ENST00000320672 FRAS1Q86XX4 4008 aa3.32□□□□□ -1.88
SSBP2-201ENST00000320672 MT1GP13640 62 aa3.3□□□□□ -1.88
SSBP2-201ENST00000320672 LRP2P98164 4655 aa3.3□□□□□ -1.88
SSBP2-201ENST00000320672 DNAH3Q8TD57 4116 aa3.3□□□□□ -1.88
SSBP2-201ENST00000320672 KMT2AQ03164 3969 aa3.3□□□□□ -1.88
SSBP2-201ENST00000320672 PCLOQ9Y6V0 5065 aa3.29□□□□□ -1.88
SSBP2-201ENST00000320672 SPRR2EP22531 72 aa3.28□□□□□ -1.88
SSBP2-201ENST00000320672 SPRR2BP35325 72 aa3.28□□□□□ -1.88
SSBP2-201ENST00000320672 SPRR2AP35326 72 aa3.28□□□□□ -1.88
SSBP2-201ENST00000320672 HERC1Q15751 4861 aa3.28□□□□□ -1.88
SSBP2-201ENST00000320672 VPS13BQ7Z7G8 4022 aa3.28□□□□□ -1.89
SSBP2-201ENST00000320672 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
SSBP2-201ENST00000320672 LYSTQ99698 3801 aa3.25□□□□□ -1.89
SSBP2-201ENST00000320672 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
SSBP2-201ENST00000320672 DNAH6Q9C0G6 4158 aa3.24□□□□□ -1.89
SSBP2-201ENST00000320672 KRTAP4-7Q9BYR0 210 aa3.24□□□□□ -1.89
SSBP2-201ENST00000320672 KRTAP23-1A1A580 65 aa3.22□□□□□ -1.89
SSBP2-201ENST00000320672 RNF213Q63HN8 5207 aa3.17□□□□□ -1.9
SSBP2-201ENST00000320672 UBR4Q5T4S7 5183 aa3.16□□□□□ -1.9
SSBP2-201ENST00000320672 DNAH7Q8WXX0 4024 aa3.15□□□□□ -1.9
SSBP2-201ENST00000320672 KRTAP19-1Q8IUB9 90 aa3.15□□□□□ -1.91
SSBP2-201ENST00000320672 CMYA5Q8N3K9 4069 aa3.13□□□□□ -1.91
SSBP2-201ENST00000320672 MT1XP80297 61 aa3.12□□□□□ -1.91
SSBP2-201ENST00000320672 SPRR2DP22532 72 aa3.12□□□□□ -1.91
SSBP2-201ENST00000320672 HSPG2P98160 4391 aa3.12□□□□□ -1.91
SSBP2-201ENST00000320672 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
SSBP2-201ENST00000320672 MT1BP07438 61 aa3.09□□□□□ -1.91
SSBP2-201ENST00000320672 FSIP2Q5CZC0 6907 aa3.08□□□□□ -1.92
SSBP2-201ENST00000320672 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
SSBP2-201ENST00000320672 PKD1P98161 4303 aa3.05□□□□□ -1.92
SSBP2-201ENST00000320672 LOC100996750A0A140TA64 210 aa3.05□□□□□ -1.92
SSBP2-201ENST00000320672 KRTAP9-8Q9BYQ0 159 aa3.04□□□□□ -1.92
SSBP2-201ENST00000320672 LCE2CQ5TA81 110 aa3.03□□□□□ -1.92
SSBP2-201ENST00000320672 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
SSBP2-201ENST00000320672 LCE2BO14633 110 aa3.03□□□□□ -1.92
SSBP2-201ENST00000320672 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.92
SSBP2-201ENST00000320672 HECTD4Q9Y4D8 3996 aa3.02□□□□□ -1.93
SSBP2-201ENST00000320672 PKHD1P08F94 4074 aa3.02□□□□□ -1.93
SSBP2-201ENST00000320672 MT4P47944 62 aa2.99□□□□□ -1.93
SSBP2-201ENST00000320672 MUC17Q685J3 4493 aa2.99□□□□□ -1.93
SSBP2-201ENST00000320672 KRTAP19-8Q3LI54 63 aa2.97□□□□□ -1.93
SSBP2-201ENST00000320672 KRTAP19-2Q3LHN2 52 aa2.96□□□□□ -1.94
SSBP2-201ENST00000320672 MUC2Q02817 5179 aa2.96□□□□□ -1.94
SSBP2-201ENST00000320672 KRTAP9-3Q9BYQ3 159 aa2.95□□□□□ -1.94
SSBP2-201ENST00000320672 PKHD1L1Q86WI1 4243 aa2.92□□□□□ -1.94
SSBP2-201ENST00000320672 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
SSBP2-201ENST00000320672 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
SSBP2-201ENST00000320672 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
SSBP2-201ENST00000320672 LCE2DQ5TA82 110 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms