RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 DEFB105AQ8NG35 78 aa4.55□□□□□ -1.68
GFM1-202ENST00000312756 RYR1P21817 5038 aa4.55□□□□□ -1.68
GFM1-202ENST00000312756 Q5W150 140 aa4.54□□□□□ -1.68
GFM1-202ENST00000312756 LINC00472Q9H8W2 130 aa4.53□□□□□ -1.68
GFM1-202ENST00000312756 ANAPC11Q9NYG5 84 aa4.53□□□□□ -1.68
GFM1-202ENST00000312756 IGLV7-43P04211 117 aa4.52□□□□□ -1.69
GFM1-202ENST00000312756 Q8N377 158 aa4.51□□□□□ -1.69
GFM1-202ENST00000312756 KRTAP10-4P60372 401 aaPredicted RBP4.5□□□□□ -1.69
GFM1-202ENST00000312756 RPL37AP61513 92 aaKnown RBP4.5□□□□□ -1.69
GFM1-202ENST00000312756 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
GFM1-202ENST00000312756 Q8N1X5 172 aa4.5□□□□□ -1.69
GFM1-202ENST00000312756 A0A1B0GU69 56 aa4.5□□□□□ -1.69
GFM1-202ENST00000312756 A0A0G2JQZ4 141 aa4.49□□□□□ -1.69
GFM1-202ENST00000312756 HERC2O95714 4834 aa4.48□□□□□ -1.69
GFM1-202ENST00000312756 Q5VSD8 79 aa4.46□□□□□ -1.69
GFM1-202ENST00000312756 A0A1B0GVX0 72 aa4.46□□□□□ -1.7
GFM1-202ENST00000312756 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
GFM1-202ENST00000312756 TP53AIP1Q9HCN2 124 aa4.45□□□□□ -1.7
GFM1-202ENST00000312756 LRP1Q07954 4544 aaKnown RBP4.45□□□□□ -1.7
GFM1-202ENST00000312756 KRTAP1-4P0C5Y4 121 aa4.44□□□□□ -1.7
GFM1-202ENST00000312756 WFDC13Q8IUB5 93 aa4.44□□□□□ -1.7
GFM1-202ENST00000312756 PKHD1L1Q86WI1 4243 aa4.43□□□□□ -1.7
GFM1-202ENST00000312756 SPRR1BP22528 89 aa4.43□□□□□ -1.7
GFM1-202ENST00000312756 ACYP2P14621 99 aa4.42□□□□□ -1.7
GFM1-202ENST00000312756 MYCBP2O75592 4640 aa4.41□□□□□ -1.7
GFM1-202ENST00000312756 KRTAP13-2Q52LG2 175 aa4.41□□□□□ -1.7
GFM1-202ENST00000312756 SPINK6Q6UWN8 80 aa4.41□□□□□ -1.7
GFM1-202ENST00000312756 FLG2Q5D862 2391 aaPredicted RBP4.41□□□□□ -1.7
GFM1-202ENST00000312756 SPINT4Q6UDR6 99 aa4.41□□□□□ -1.7
GFM1-202ENST00000312756 DEFB116Q30KQ4 102 aa4.4□□□□□ -1.7
GFM1-202ENST00000312756 IGFL1Q6UW32 110 aa4.4□□□□□ -1.7
GFM1-202ENST00000312756 PCOTHQ58A44 107 aa4.39□□□□□ -1.71
GFM1-202ENST00000312756 LINC00304Q8N9R0 145 aa4.39□□□□□ -1.71
GFM1-202ENST00000312756 ABCA13Q86UQ4 5058 aa4.39□□□□□ -1.71
GFM1-202ENST00000312756 FAT3Q8TDW7 4589 aa4.38□□□□□ -1.71
GFM1-202ENST00000312756 PCLOQ9Y6V0 5065 aa4.36□□□□□ -1.71
GFM1-202ENST00000312756 Q96NJ1 140 aa4.36□□□□□ -1.71
GFM1-202ENST00000312756 TNXBP22105 4242 aa4.35□□□□□ -1.71
GFM1-202ENST00000312756 TYMSOSQ8TAI1 123 aa4.34□□□□□ -1.71
GFM1-202ENST00000312756 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
GFM1-202ENST00000312756 SSBP3-AS1Q7Z2R9 100 aa4.31□□□□□ -1.72
GFM1-202ENST00000312756 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
GFM1-202ENST00000312756 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
GFM1-202ENST00000312756 KRTAP10-8P60410 259 aa4.29□□□□□ -1.72
GFM1-202ENST00000312756 DMBT1Q9UGM3 2413 aaPredicted RBP4.28□□□□□ -1.72
GFM1-202ENST00000312756 A0A1B0GU33 70 aa4.23□□□□□ -1.73
GFM1-202ENST00000312756 SPINK1P00995 79 aa4.22□□□□□ -1.73
GFM1-202ENST00000312756 HERC1Q15751 4861 aa4.21□□□□□ -1.74
GFM1-202ENST00000312756 IGKV2-30P06310 120 aa4.21□□□□□ -1.74
GFM1-202ENST00000312756 H0YAA0 97 aa4.18□□□□□ -1.74
GFM1-202ENST00000312756 RPS29P62273 56 aaKnown RBP4.17□□□□□ -1.74
GFM1-202ENST00000312756 LPAP08519 4548 aa4.16□□□□□ -1.74
GFM1-202ENST00000312756 TPRXLQ17RH7 258 aa4.16□□□□□ -1.74
GFM1-202ENST00000312756 KRTAP13-3Q3SY46 172 aa4.16□□□□□ -1.74
GFM1-202ENST00000312756 C9orf92A6NGG3 77 aa4.14□□□□□ -1.75
GFM1-202ENST00000312756 MRPL34Q9BQ48 92 aaKnown RBP4.14□□□□□ -1.75
GFM1-202ENST00000312756 CRIPTQ9P021 101 aa4.14□□□□□ -1.75
GFM1-202ENST00000312756 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.75
GFM1-202ENST00000312756 LRP2P98164 4655 aa4.08□□□□□ -1.76
GFM1-202ENST00000312756 HMCN2Q8NDA2 5059 aa4.07□□□□□ -1.76
GFM1-202ENST00000312756 IGKV2D-30A0A075B6S6 120 aa4.05□□□□□ -1.76
GFM1-202ENST00000312756 COX6B2Q6YFQ2 88 aa4.05□□□□□ -1.76
GFM1-202ENST00000312756 H1FX-AS1Q4G0G2 97 aa4.03□□□□□ -1.76
GFM1-202ENST00000312756 PLAC4Q8WY50 150 aa3.97□□□□□ -1.77
GFM1-202ENST00000312756 RPL37P61927 97 aaKnown RBP3.96□□□□□ -1.78
GFM1-202ENST00000312756 UBR4Q5T4S7 5183 aa3.96□□□□□ -1.78
GFM1-202ENST00000312756 MUC2Q02817 5179 aa3.93□□□□□ -1.78
GFM1-202ENST00000312756 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
GFM1-202ENST00000312756 R4GN34 69 aa3.93□□□□□ -1.78
GFM1-202ENST00000312756 KRTAP4-1Q9BYQ7 146 aa3.91□□□□□ -1.78
GFM1-202ENST00000312756 MUC17Q685J3 4493 aa3.89□□□□□ -1.79
GFM1-202ENST00000312756 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
GFM1-202ENST00000312756 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
GFM1-202ENST00000312756 INE1O15225 51 aa3.86□□□□□ -1.79
GFM1-202ENST00000312756 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
GFM1-202ENST00000312756 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
GFM1-202ENST00000312756 KRTAP19-2Q3LHN2 52 aa3.75□□□□□ -1.81
GFM1-202ENST00000312756 KRTAP12-2P59991 146 aa3.73□□□□□ -1.81
GFM1-202ENST00000312756 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.81
GFM1-202ENST00000312756 S4R3F8 94 aa3.71□□□□□ -1.82
GFM1-202ENST00000312756 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
GFM1-202ENST00000312756 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
GFM1-202ENST00000312756 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
GFM1-202ENST00000312756 KRTAP10-6P60371 365 aaPredicted RBP3.62□□□□□ -1.83
GFM1-202ENST00000312756 MT1HP80294 61 aa3.62□□□□□ -1.83
GFM1-202ENST00000312756 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
GFM1-202ENST00000312756 A0A0D9SG42 100 aa3.6□□□□□ -1.83
GFM1-202ENST00000312756 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
GFM1-202ENST00000312756 M0R2T5 61 aa3.56□□□□□ -1.84
GFM1-202ENST00000312756 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
GFM1-202ENST00000312756 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
GFM1-202ENST00000312756 KRTAP9-3Q9BYQ3 159 aa3.49□□□□□ -1.85
GFM1-202ENST00000312756 MT2AP02795 61 aa3.46□□□□□ -1.86
GFM1-202ENST00000312756 MT1FP04733 61 aa3.45□□□□□ -1.86
GFM1-202ENST00000312756 MT3P25713 68 aa3.43□□□□□ -1.86
GFM1-202ENST00000312756 M0QZ58 72 aa3.41□□□□□ -1.86
GFM1-202ENST00000312756 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
GFM1-202ENST00000312756 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
GFM1-202ENST00000312756 FSIP2Q5CZC0 6907 aa3.31□□□□□ -1.88
GFM1-202ENST00000312756 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms