RNA–Protein interactions for RNA: ENST00000307635.3

ZNF556-201, Transcript of zinc finger protein 556, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF556, Length 6,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-201ENST00000307635 MEGF8Q7Z7M0 2845 aa4.55□□□□□ -1.68
ZNF556-201ENST00000307635 INE1O15225 51 aa4.53□□□□□ -1.68
ZNF556-201ENST00000307635 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
ZNF556-201ENST00000307635 ANK2Q01484 3957 aa4.52□□□□□ -1.69
ZNF556-201ENST00000307635 COL7A1Q02388 2944 aa4.52□□□□□ -1.69
ZNF556-201ENST00000307635 VPS13DQ5THJ4 4388 aa4.51□□□□□ -1.69
ZNF556-201ENST00000307635 CUBNO60494 3623 aa4.5□□□□□ -1.69
ZNF556-201ENST00000307635 FAT2Q9NYQ8 4349 aa4.5□□□□□ -1.69
ZNF556-201ENST00000307635 DNAH5Q8TE73 4624 aa4.49□□□□□ -1.69
ZNF556-201ENST00000307635 DYNC2H1Q8NCM8 4307 aaKnown RBP4.48□□□□□ -1.69
ZNF556-201ENST00000307635 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
ZNF556-201ENST00000307635 DNAH3Q8TD57 4116 aa4.46□□□□□ -1.7
ZNF556-201ENST00000307635 DYNC1H1Q14204 4646 aaKnown RBP4.45□□□□□ -1.7
ZNF556-201ENST00000307635 MT2AP02795 61 aa4.44□□□□□ -1.7
ZNF556-201ENST00000307635 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
ZNF556-201ENST00000307635 DNAH17Q9UFH2 4485 aa4.43□□□□□ -1.7
ZNF556-201ENST00000307635 PLECQ15149 4684 aaKnown RBP4.43□□□□□ -1.7
ZNF556-201ENST00000307635 LCE2CQ5TA81 110 aa4.41□□□□□ -1.7
ZNF556-201ENST00000307635 SVEP1Q4LDE5 3571 aa4.41□□□□□ -1.7
ZNF556-201ENST00000307635 KRTAP17-1Q9BYP8 105 aa4.37□□□□□ -1.71
ZNF556-201ENST00000307635 DNHD1Q96M86 4753 aa4.36□□□□□ -1.71
ZNF556-201ENST00000307635 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
ZNF556-201ENST00000307635 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
ZNF556-201ENST00000307635 ZNF469Q96JG9 3925 aaPredicted RBP4.33□□□□□ -1.72
ZNF556-201ENST00000307635 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
ZNF556-201ENST00000307635 VPS13CQ709C8 3753 aa4.32□□□□□ -1.72
ZNF556-201ENST00000307635 LRP1BQ9NZR2 4599 aa4.32□□□□□ -1.72
ZNF556-201ENST00000307635 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
ZNF556-201ENST00000307635 MT1FP04733 61 aa4.31□□□□□ -1.72
ZNF556-201ENST00000307635 DNAH7Q8WXX0 4024 aa4.3□□□□□ -1.72
ZNF556-201ENST00000307635 DNAH8Q96JB1 4490 aa4.29□□□□□ -1.72
ZNF556-201ENST00000307635 PRKDCP78527 4128 aaKnown RBP4.28□□□□□ -1.72
ZNF556-201ENST00000307635 CMYA5Q8N3K9 4069 aa4.28□□□□□ -1.72
ZNF556-201ENST00000307635 SRRM2Q9UQ35 2752 aaKnown RBP4.27□□□□□ -1.73
ZNF556-201ENST00000307635 STARD9Q9P2P6 4700 aa4.26□□□□□ -1.73
ZNF556-201ENST00000307635 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
ZNF556-201ENST00000307635 SPRR2EP22531 72 aa4.23□□□□□ -1.73
ZNF556-201ENST00000307635 SPRR2BP35325 72 aa4.23□□□□□ -1.73
ZNF556-201ENST00000307635 SPRR2AP35326 72 aa4.23□□□□□ -1.73
ZNF556-201ENST00000307635 SACSQ9NZJ4 4579 aa4.22□□□□□ -1.73
ZNF556-201ENST00000307635 HERC1Q15751 4861 aa4.19□□□□□ -1.74
ZNF556-201ENST00000307635 PKHD1L1Q86WI1 4243 aa4.19□□□□□ -1.74
ZNF556-201ENST00000307635 LCE2BO14633 110 aa4.18□□□□□ -1.74
ZNF556-201ENST00000307635 BIRC6Q9NR09 4857 aa4.16□□□□□ -1.74
ZNF556-201ENST00000307635 RYR3Q15413 4870 aa4.12□□□□□ -1.75
ZNF556-201ENST00000307635 SPRR2DP22532 72 aa4.12□□□□□ -1.75
ZNF556-201ENST00000307635 FAT1Q14517 4588 aa4.12□□□□□ -1.75
ZNF556-201ENST00000307635 FAT3Q8TDW7 4589 aa4.11□□□□□ -1.75
ZNF556-201ENST00000307635 RYR1P21817 5038 aa4.11□□□□□ -1.75
ZNF556-201ENST00000307635 HSPG2P98160 4391 aa4.09□□□□□ -1.75
ZNF556-201ENST00000307635 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
ZNF556-201ENST00000307635 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
ZNF556-201ENST00000307635 LCE2AQ5TA79 106 aaPredicted RBP4.07□□□□□ -1.76
ZNF556-201ENST00000307635 VPS13BQ7Z7G8 4022 aa4.07□□□□□ -1.76
ZNF556-201ENST00000307635 KRTAP19-8Q3LI54 63 aa4.07□□□□□ -1.76
ZNF556-201ENST00000307635 KMT2AQ03164 3969 aa4.07□□□□□ -1.76
ZNF556-201ENST00000307635 APOBP04114 4563 aaKnown RBP4.06□□□□□ -1.76
ZNF556-201ENST00000307635 RYR2Q92736 4967 aa4.05□□□□□ -1.76
ZNF556-201ENST00000307635 KRTAP19-1Q8IUB9 90 aa4.05□□□□□ -1.76
ZNF556-201ENST00000307635 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
ZNF556-201ENST00000307635 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
ZNF556-201ENST00000307635 FRAS1Q86XX4 4008 aa3.99□□□□□ -1.77
ZNF556-201ENST00000307635 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
ZNF556-201ENST00000307635 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
ZNF556-201ENST00000307635 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
ZNF556-201ENST00000307635 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
ZNF556-201ENST00000307635 CSMD3Q7Z407 3707 aa3.91□□□□□ -1.78
ZNF556-201ENST00000307635 HERC2O95714 4834 aa3.9□□□□□ -1.79
ZNF556-201ENST00000307635 LRP1Q07954 4544 aaKnown RBP3.9□□□□□ -1.79
ZNF556-201ENST00000307635 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
ZNF556-201ENST00000307635 MT1BP07438 61 aa3.87□□□□□ -1.79
ZNF556-201ENST00000307635 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
ZNF556-201ENST00000307635 MUC17Q685J3 4493 aa3.84□□□□□ -1.79
ZNF556-201ENST00000307635 MT1XP80297 61 aa3.84□□□□□ -1.79
ZNF556-201ENST00000307635 HECTD4Q9Y4D8 3996 aa3.84□□□□□ -1.79
ZNF556-201ENST00000307635 PKD1P98161 4303 aa3.82□□□□□ -1.8
ZNF556-201ENST00000307635 LYSTQ99698 3801 aa3.8□□□□□ -1.8
ZNF556-201ENST00000307635 MT1GP13640 62 aa3.79□□□□□ -1.8
ZNF556-201ENST00000307635 KRTAP19-6Q3LI70 58 aa3.77□□□□□ -1.81
ZNF556-201ENST00000307635 KIAA1109Q2LD37 5005 aa3.76□□□□□ -1.81
ZNF556-201ENST00000307635 PKHD1P08F94 4074 aa3.75□□□□□ -1.81
ZNF556-201ENST00000307635 PCLOQ9Y6V0 5065 aa3.74□□□□□ -1.81
ZNF556-201ENST00000307635 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
ZNF556-201ENST00000307635 HYDINQ4G0P3 5121 aa3.68□□□□□ -1.82
ZNF556-201ENST00000307635 KRTAP19-2Q3LHN2 52 aa3.67□□□□□ -1.82
ZNF556-201ENST00000307635 TNXBP22105 4242 aa3.67□□□□□ -1.82
ZNF556-201ENST00000307635 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
ZNF556-201ENST00000307635 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
ZNF556-201ENST00000307635 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
ZNF556-201ENST00000307635 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
ZNF556-201ENST00000307635 MT3P25713 68 aa3.64□□□□□ -1.83
ZNF556-201ENST00000307635 KRTAP4-8Q9BYQ9 185 aa3.64□□□□□ -1.83
ZNF556-201ENST00000307635 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
ZNF556-201ENST00000307635 KMT2CQ8NEZ4 4911 aaKnown RBP3.54□□□□□ -1.84
ZNF556-201ENST00000307635 MT4P47944 62 aa3.54□□□□□ -1.84
ZNF556-201ENST00000307635 LRP2P98164 4655 aa3.53□□□□□ -1.84
ZNF556-201ENST00000307635 LPAP08519 4548 aa3.52□□□□□ -1.85
ZNF556-201ENST00000307635 MT1EP04732 61 aa3.51□□□□□ -1.85
ZNF556-201ENST00000307635 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
ZNF556-201ENST00000307635 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms