RNA–Protein interactions for RNA: ENST00000304330.8

RPAP1-201, Transcript of RNA polymerase II associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAP1, Length 4,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-201ENST00000304330 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
RPAP1-201ENST00000304330 DNAH9Q9NYC9 4486 aa5.31□□□□□ -1.56
RPAP1-201ENST00000304330 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
RPAP1-201ENST00000304330 DNAH3Q8TD57 4116 aa5.25□□□□□ -1.57
RPAP1-201ENST00000304330 DNAH7Q8WXX0 4024 aa5.23□□□□□ -1.57
RPAP1-201ENST00000304330 PLECQ15149 4684 aaKnown RBP5.21□□□□□ -1.58
RPAP1-201ENST00000304330 DNAH17Q9UFH2 4485 aa5.19□□□□□ -1.58
RPAP1-201ENST00000304330 PRKDCP78527 4128 aaKnown RBP5.19□□□□□ -1.58
RPAP1-201ENST00000304330 VPS13DQ5THJ4 4388 aa5.18□□□□□ -1.58
RPAP1-201ENST00000304330 DNAH1Q9P2D7 4330 aa5.17□□□□□ -1.58
RPAP1-201ENST00000304330 STARD9Q9P2P6 4700 aa5.15□□□□□ -1.58
RPAP1-201ENST00000304330 DNAH5Q8TE73 4624 aa5.12□□□□□ -1.59
RPAP1-201ENST00000304330 KMT2AQ03164 3969 aa5.11□□□□□ -1.59
RPAP1-201ENST00000304330 DNAH2Q9P225 4427 aa5.11□□□□□ -1.59
RPAP1-201ENST00000304330 KRTAP4-5Q9BYR2 181 aa5.09□□□□□ -1.59
RPAP1-201ENST00000304330 DNAH11Q96DT5 4516 aa5.07□□□□□ -1.6
RPAP1-201ENST00000304330 INE1O15225 51 aa5.05□□□□□ -1.6
RPAP1-201ENST00000304330 FRAS1Q86XX4 4008 aa5.03□□□□□ -1.6
RPAP1-201ENST00000304330 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
RPAP1-201ENST00000304330 LORP23490 312 aaPredicted RBP5.01□□□□□ -1.61
RPAP1-201ENST00000304330 DYNC2H1Q8NCM8 4307 aaKnown RBP4.96□□□□□ -1.62
RPAP1-201ENST00000304330 DNAH6Q9C0G6 4158 aa4.96□□□□□ -1.62
RPAP1-201ENST00000304330 DYNC1H1Q14204 4646 aaKnown RBP4.95□□□□□ -1.62
RPAP1-201ENST00000304330 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
RPAP1-201ENST00000304330 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
RPAP1-201ENST00000304330 DNAH8Q96JB1 4490 aa4.92□□□□□ -1.62
RPAP1-201ENST00000304330 SACSQ9NZJ4 4579 aa4.92□□□□□ -1.62
RPAP1-201ENST00000304330 HYDINQ4G0P3 5121 aa4.9□□□□□ -1.62
RPAP1-201ENST00000304330 FAT1Q14517 4588 aa4.89□□□□□ -1.63
RPAP1-201ENST00000304330 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
RPAP1-201ENST00000304330 LRP1BQ9NZR2 4599 aa4.88□□□□□ -1.63
RPAP1-201ENST00000304330 KRTAP4-1Q9BYQ7 146 aa4.87□□□□□ -1.63
RPAP1-201ENST00000304330 KIAA1109Q2LD37 5005 aa4.85□□□□□ -1.63
RPAP1-201ENST00000304330 SPRR2GQ9BYE4 73 aa4.83□□□□□ -1.64
RPAP1-201ENST00000304330 FAT2Q9NYQ8 4349 aa4.82□□□□□ -1.64
RPAP1-201ENST00000304330 PKHD1P08F94 4074 aa4.8□□□□□ -1.64
RPAP1-201ENST00000304330 KMT2CQ8NEZ4 4911 aaKnown RBP4.77□□□□□ -1.65
RPAP1-201ENST00000304330 VPS13BQ7Z7G8 4022 aa4.77□□□□□ -1.65
RPAP1-201ENST00000304330 RYR1P21817 5038 aa4.77□□□□□ -1.65
RPAP1-201ENST00000304330 RYR3Q15413 4870 aa4.75□□□□□ -1.65
RPAP1-201ENST00000304330 MT1HP80294 61 aa4.72□□□□□ -1.65
RPAP1-201ENST00000304330 PKD1P98161 4303 aa4.71□□□□□ -1.66
RPAP1-201ENST00000304330 MT2AP02795 61 aa4.69□□□□□ -1.66
RPAP1-201ENST00000304330 MYCBP2O75592 4640 aa4.66□□□□□ -1.66
RPAP1-201ENST00000304330 APOBP04114 4563 aaKnown RBP4.65□□□□□ -1.66
RPAP1-201ENST00000304330 RYR2Q92736 4967 aa4.64□□□□□ -1.67
RPAP1-201ENST00000304330 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
RPAP1-201ENST00000304330 FAT3Q8TDW7 4589 aa4.63□□□□□ -1.67
RPAP1-201ENST00000304330 LRP1Q07954 4544 aaKnown RBP4.62□□□□□ -1.67
RPAP1-201ENST00000304330 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
RPAP1-201ENST00000304330 KRTAP17-1Q9BYP8 105 aa4.62□□□□□ -1.67
RPAP1-201ENST00000304330 MT1FP04733 61 aa4.58□□□□□ -1.68
RPAP1-201ENST00000304330 KRTAP19-8Q3LI54 63 aa4.56□□□□□ -1.68
RPAP1-201ENST00000304330 CRCT1Q9UGL9 99 aa4.53□□□□□ -1.68
RPAP1-201ENST00000304330 EPPK1P58107 5090 aaKnown RBP4.52□□□□□ -1.69
RPAP1-201ENST00000304330 HERC2O95714 4834 aa4.51□□□□□ -1.69
RPAP1-201ENST00000304330 KRTAP19-1Q8IUB9 90 aa4.51□□□□□ -1.69
RPAP1-201ENST00000304330 HSPG2P98160 4391 aa4.47□□□□□ -1.69
RPAP1-201ENST00000304330 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
RPAP1-201ENST00000304330 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
RPAP1-201ENST00000304330 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
RPAP1-201ENST00000304330 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
RPAP1-201ENST00000304330 LRP2P98164 4655 aa4.38□□□□□ -1.71
RPAP1-201ENST00000304330 BIRC6Q9NR09 4857 aa4.37□□□□□ -1.71
RPAP1-201ENST00000304330 HERC1Q15751 4861 aa4.36□□□□□ -1.71
RPAP1-201ENST00000304330 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
RPAP1-201ENST00000304330 ABCA13Q86UQ4 5058 aa4.34□□□□□ -1.72
RPAP1-201ENST00000304330 MT1XP80297 61 aa4.33□□□□□ -1.72
RPAP1-201ENST00000304330 LCE2CQ5TA81 110 aa4.32□□□□□ -1.72
RPAP1-201ENST00000304330 MT1BP07438 61 aa4.32□□□□□ -1.72
RPAP1-201ENST00000304330 TNXBP22105 4242 aa4.31□□□□□ -1.72
RPAP1-201ENST00000304330 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
RPAP1-201ENST00000304330 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
RPAP1-201ENST00000304330 KRTAP10-7P60409 375 aaPredicted RBP4.28□□□□□ -1.72
RPAP1-201ENST00000304330 LPAP08519 4548 aa4.28□□□□□ -1.72
RPAP1-201ENST00000304330 PCLOQ9Y6V0 5065 aa4.27□□□□□ -1.73
RPAP1-201ENST00000304330 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
RPAP1-201ENST00000304330 RNF213Q63HN8 5207 aa4.17□□□□□ -1.74
RPAP1-201ENST00000304330 MUC2Q02817 5179 aa4.13□□□□□ -1.75
RPAP1-201ENST00000304330 UBR4Q5T4S7 5183 aa4.1□□□□□ -1.75
RPAP1-201ENST00000304330 MUC17Q685J3 4493 aa4.1□□□□□ -1.75
RPAP1-201ENST00000304330 SPRR2FQ96RM1 72 aa4.08□□□□□ -1.76
RPAP1-201ENST00000304330 FSIP2Q5CZC0 6907 aa4.05□□□□□ -1.76
RPAP1-201ENST00000304330 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
RPAP1-201ENST00000304330 MT1GP13640 62 aa4.01□□□□□ -1.77
RPAP1-201ENST00000304330 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
RPAP1-201ENST00000304330 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
RPAP1-201ENST00000304330 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
RPAP1-201ENST00000304330 LCE2BO14633 110 aa3.93□□□□□ -1.78
RPAP1-201ENST00000304330 MT1LQ93083 61 aa3.91□□□□□ -1.78
RPAP1-201ENST00000304330 HMCN2Q8NDA2 5059 aa3.89□□□□□ -1.79
RPAP1-201ENST00000304330 MT1EP04732 61 aa3.88□□□□□ -1.79
RPAP1-201ENST00000304330 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
RPAP1-201ENST00000304330 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
RPAP1-201ENST00000304330 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
RPAP1-201ENST00000304330 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
RPAP1-201ENST00000304330 SPRR2EP22531 72 aa3.79□□□□□ -1.8
RPAP1-201ENST00000304330 SPRR2BP35325 72 aa3.79□□□□□ -1.8
RPAP1-201ENST00000304330 SPRR2AP35326 72 aa3.79□□□□□ -1.8
RPAP1-201ENST00000304330 LCE2AQ5TA79 106 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms