RNA–Protein interactions for RNA: ENST00000302904.8

UBTF-201, Transcript of upstream binding transcription factor, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBTF, Length 4,997 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-201ENST00000302904 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
UBTF-201ENST00000302904 AKAP9Q99996 3911 aa6.63□□□□□ -1.35
UBTF-201ENST00000302904 PLECQ15149 4684 aaKnown RBP6.57□□□□□ -1.36
UBTF-201ENST00000302904 KRTAP10-12P60413 245 aa6.5□□□□□ -1.37
UBTF-201ENST00000302904 DNAH11Q96DT5 4516 aa6.48□□□□□ -1.37
UBTF-201ENST00000302904 DNAH1Q9P2D7 4330 aa6.44□□□□□ -1.38
UBTF-201ENST00000302904 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
UBTF-201ENST00000302904 RYR1P21817 5038 aa6.38□□□□□ -1.39
UBTF-201ENST00000302904 DYNC1H1Q14204 4646 aaKnown RBP6.38□□□□□ -1.39
UBTF-201ENST00000302904 FAT1Q14517 4588 aa6.36□□□□□ -1.39
UBTF-201ENST00000302904 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
UBTF-201ENST00000302904 DNAH10Q8IVF4 4471 aa6.34□□□□□ -1.39
UBTF-201ENST00000302904 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
UBTF-201ENST00000302904 LRP1BQ9NZR2 4599 aa6.3□□□□□ -1.4
UBTF-201ENST00000302904 CRCT1Q9UGL9 99 aa6.3□□□□□ -1.4
UBTF-201ENST00000302904 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
UBTF-201ENST00000302904 STARD9Q9P2P6 4700 aa6.28□□□□□ -1.4
UBTF-201ENST00000302904 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
UBTF-201ENST00000302904 MT1HP80294 61 aa6.24□□□□□ -1.41
UBTF-201ENST00000302904 DNAH17Q9UFH2 4485 aa6.23□□□□□ -1.41
UBTF-201ENST00000302904 PRKDCP78527 4128 aaKnown RBP6.22□□□□□ -1.41
UBTF-201ENST00000302904 KIAA1109Q2LD37 5005 aa6.19□□□□□ -1.42
UBTF-201ENST00000302904 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
UBTF-201ENST00000302904 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
UBTF-201ENST00000302904 MT2AP02795 61 aa6.13□□□□□ -1.43
UBTF-201ENST00000302904 DNAH8Q96JB1 4490 aa6.11□□□□□ -1.43
UBTF-201ENST00000302904 FAT2Q9NYQ8 4349 aa6.1□□□□□ -1.43
UBTF-201ENST00000302904 DNAH2Q9P225 4427 aa6.08□□□□□ -1.44
UBTF-201ENST00000302904 RYR3Q15413 4870 aa6.07□□□□□ -1.44
UBTF-201ENST00000302904 DYNC2H1Q8NCM8 4307 aaKnown RBP6.04□□□□□ -1.44
UBTF-201ENST00000302904 ANK2Q01484 3957 aa6.03□□□□□ -1.44
UBTF-201ENST00000302904 MT1FP04733 61 aa6.01□□□□□ -1.45
UBTF-201ENST00000302904 SPRR2GQ9BYE4 73 aa6□□□□□ -1.45
UBTF-201ENST00000302904 KRTAP17-1Q9BYP8 105 aa5.99□□□□□ -1.45
UBTF-201ENST00000302904 APOBP04114 4563 aaKnown RBP5.98□□□□□ -1.45
UBTF-201ENST00000302904 KMT2AQ03164 3969 aa5.97□□□□□ -1.45
UBTF-201ENST00000302904 LYSTQ99698 3801 aa5.97□□□□□ -1.45
UBTF-201ENST00000302904 VPS13BQ7Z7G8 4022 aa5.96□□□□□ -1.46
UBTF-201ENST00000302904 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
UBTF-201ENST00000302904 DNAH3Q8TD57 4116 aa5.89□□□□□ -1.47
UBTF-201ENST00000302904 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
UBTF-201ENST00000302904 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
UBTF-201ENST00000302904 HERC2O95714 4834 aa5.83□□□□□ -1.48
UBTF-201ENST00000302904 LRP1Q07954 4544 aaKnown RBP5.81□□□□□ -1.48
UBTF-201ENST00000302904 FAT3Q8TDW7 4589 aa5.81□□□□□ -1.48
UBTF-201ENST00000302904 RYR2Q92736 4967 aa5.81□□□□□ -1.48
UBTF-201ENST00000302904 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
UBTF-201ENST00000302904 BIRC6Q9NR09 4857 aa5.73□□□□□ -1.49
UBTF-201ENST00000302904 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
UBTF-201ENST00000302904 HYDINQ4G0P3 5121 aa5.66□□□□□ -1.5
UBTF-201ENST00000302904 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
UBTF-201ENST00000302904 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
UBTF-201ENST00000302904 DNAH6Q9C0G6 4158 aa5.64□□□□□ -1.51
UBTF-201ENST00000302904 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
UBTF-201ENST00000302904 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
UBTF-201ENST00000302904 CMYA5Q8N3K9 4069 aa5.61□□□□□ -1.51
UBTF-201ENST00000302904 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
UBTF-201ENST00000302904 LRP2P98164 4655 aa5.6□□□□□ -1.51
UBTF-201ENST00000302904 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
UBTF-201ENST00000302904 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
UBTF-201ENST00000302904 HSPG2P98160 4391 aa5.51□□□□□ -1.53
UBTF-201ENST00000302904 DNAH7Q8WXX0 4024 aa5.5□□□□□ -1.53
UBTF-201ENST00000302904 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
UBTF-201ENST00000302904 HERC1Q15751 4861 aa5.49□□□□□ -1.53
UBTF-201ENST00000302904 FRAS1Q86XX4 4008 aa5.48□□□□□ -1.53
UBTF-201ENST00000302904 MT1BP07438 61 aa5.46□□□□□ -1.54
UBTF-201ENST00000302904 PKD1P98161 4303 aa5.46□□□□□ -1.54
UBTF-201ENST00000302904 HECTD4Q9Y4D8 3996 aa5.46□□□□□ -1.54
UBTF-201ENST00000302904 PKHD1P08F94 4074 aa5.45□□□□□ -1.54
UBTF-201ENST00000302904 MT1XP80297 61 aa5.44□□□□□ -1.54
UBTF-201ENST00000302904 KMT2CQ8NEZ4 4911 aaKnown RBP5.42□□□□□ -1.54
UBTF-201ENST00000302904 SPRR2EP22531 72 aa5.4□□□□□ -1.54
UBTF-201ENST00000302904 SPRR2BP35325 72 aa5.4□□□□□ -1.54
UBTF-201ENST00000302904 SPRR2AP35326 72 aa5.4□□□□□ -1.54
UBTF-201ENST00000302904 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.55
UBTF-201ENST00000302904 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
UBTF-201ENST00000302904 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
UBTF-201ENST00000302904 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
UBTF-201ENST00000302904 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
UBTF-201ENST00000302904 LPAP08519 4548 aa5.27□□□□□ -1.57
UBTF-201ENST00000302904 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
UBTF-201ENST00000302904 ABCA13Q86UQ4 5058 aa5.25□□□□□ -1.57
UBTF-201ENST00000302904 PKHD1L1Q86WI1 4243 aa5.24□□□□□ -1.57
UBTF-201ENST00000302904 SPRR2DP22532 72 aa5.22□□□□□ -1.57
UBTF-201ENST00000302904 LCE2BO14633 110 aa5.2□□□□□ -1.58
UBTF-201ENST00000302904 MT1GP13640 62 aa5.16□□□□□ -1.58
UBTF-201ENST00000302904 UBR4Q5T4S7 5183 aa5.16□□□□□ -1.58
UBTF-201ENST00000302904 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
UBTF-201ENST00000302904 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
UBTF-201ENST00000302904 MUC17Q685J3 4493 aa5.08□□□□□ -1.6
UBTF-201ENST00000302904 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
UBTF-201ENST00000302904 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
UBTF-201ENST00000302904 TNXBP22105 4242 aa5□□□□□ -1.61
UBTF-201ENST00000302904 KRTAP19-3Q7Z4W3 81 aa4.99□□□□□ -1.61
UBTF-201ENST00000302904 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
UBTF-201ENST00000302904 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.61
UBTF-201ENST00000302904 RNF213Q63HN8 5207 aa4.96□□□□□ -1.62
UBTF-201ENST00000302904 LCE2AQ5TA79 106 aaPredicted RBP4.95□□□□□ -1.62
UBTF-201ENST00000302904 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
UBTF-201ENST00000302904 MT1EP04732 61 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms