RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 HSPG2P98160 4391 aa9.37□□□□□ -0.91
TSPAN17-201ENST00000298564 COX6B2Q6YFQ2 88 aa9.37□□□□□ -0.91
TSPAN17-201ENST00000298564 TNXBP22105 4242 aa9.36□□□□□ -0.91
TSPAN17-201ENST00000298564 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
TSPAN17-201ENST00000298564 KRTAP10-8P60410 259 aa9.36□□□□□ -0.91
TSPAN17-201ENST00000298564 RYR3Q15413 4870 aa9.34□□□□□ -0.91
TSPAN17-201ENST00000298564 A0A0D9SG42 100 aa9.33□□□□□ -0.92
TSPAN17-201ENST00000298564 ROMO1P60602 79 aa9.32□□□□□ -0.92
TSPAN17-201ENST00000298564 KRTAP17-1Q9BYP8 105 aa9.28□□□□□ -0.92
TSPAN17-201ENST00000298564 K7ERS5 55 aa9.24□□□□□ -0.93
TSPAN17-201ENST00000298564 RYR1P21817 5038 aa9.24□□□□□ -0.93
TSPAN17-201ENST00000298564 KRTAP13-4Q3LI77 160 aa9.22□□□□□ -0.93
TSPAN17-201ENST00000298564 KIAA1109Q2LD37 5005 aa9.17□□□□□ -0.94
TSPAN17-201ENST00000298564 RPL37P61927 97 aaKnown RBP9.16□□□□□ -0.94
TSPAN17-201ENST00000298564 C10orf95Q9H7T3 257 aa9.16□□□□□ -0.94
TSPAN17-201ENST00000298564 P0C880 135 aa9.15□□□□□ -0.94
TSPAN17-201ENST00000298564 XP32Q5T750 250 aa9.15□□□□□ -0.94
TSPAN17-201ENST00000298564 LPAP08519 4548 aa9.14□□□□□ -0.95
TSPAN17-201ENST00000298564 KRTAP10-6P60371 365 aaPredicted RBP9.14□□□□□ -0.95
TSPAN17-201ENST00000298564 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
TSPAN17-201ENST00000298564 MT1HL1P0DM35 61 aa9.1□□□□□ -0.95
TSPAN17-201ENST00000298564 TPRXLQ17RH7 258 aa9.09□□□□□ -0.95
TSPAN17-201ENST00000298564 SPINT4Q6UDR6 99 aa9.05□□□□□ -0.96
TSPAN17-201ENST00000298564 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
TSPAN17-201ENST00000298564 EPPK1P58107 5090 aaKnown RBP9□□□□□ -0.97
TSPAN17-201ENST00000298564 S4R3F8 94 aa8.95□□□□□ -0.98
TSPAN17-201ENST00000298564 KRTAP12-2P59991 146 aa8.94□□□□□ -0.98
TSPAN17-201ENST00000298564 LRP2P98164 4655 aa8.92□□□□□ -0.98
TSPAN17-201ENST00000298564 KRTAP4-5Q9BYR2 181 aa8.85□□□□□ -0.99
TSPAN17-201ENST00000298564 ABCA13Q86UQ4 5058 aa8.81□□□□□ -1
TSPAN17-201ENST00000298564 NDUFAF8A1L188 74 aa8.81□□□□□ -1
TSPAN17-201ENST00000298564 KRTAP12-1P59990 96 aa8.75□□□□□ -1.01
TSPAN17-201ENST00000298564 KRTAP15-1Q3LI76 137 aa8.7□□□□□ -1.02
TSPAN17-201ENST00000298564 J3QL48 77 aa8.53□□□□□ -1.04
TSPAN17-201ENST00000298564 SEC61BP60468 96 aaKnown RBP8.52□□□□□ -1.05
TSPAN17-201ENST00000298564 M0QZ58 72 aa8.5□□□□□ -1.05
TSPAN17-201ENST00000298564 MUC2Q02817 5179 aa8.49□□□□□ -1.05
TSPAN17-201ENST00000298564 HERC2O95714 4834 aa8.49□□□□□ -1.05
TSPAN17-201ENST00000298564 MUC17Q685J3 4493 aa8.47□□□□□ -1.05
TSPAN17-201ENST00000298564 KRTAP4-1Q9BYQ7 146 aa8.45□□□□□ -1.06
TSPAN17-201ENST00000298564 R4GN34 69 aa8.41□□□□□ -1.06
TSPAN17-201ENST00000298564 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
TSPAN17-201ENST00000298564 KRTAP19-2Q3LHN2 52 aa8.25□□□□□ -1.09
TSPAN17-201ENST00000298564 BIRC6Q9NR09 4857 aa8.24□□□□□ -1.09
TSPAN17-201ENST00000298564 PLAC4Q8WY50 150 aa8.23□□□□□ -1.09
TSPAN17-201ENST00000298564 HERC1Q15751 4861 aa8.12□□□□□ -1.11
TSPAN17-201ENST00000298564 PCLOQ9Y6V0 5065 aa8.08□□□□□ -1.12
TSPAN17-201ENST00000298564 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
TSPAN17-201ENST00000298564 FAT4Q6V0I7 4981 aa8.04□□□□□ -1.12
TSPAN17-201ENST00000298564 A0A0A0MQY5 61 aa8.02□□□□□ -1.12
TSPAN17-201ENST00000298564 HMCN2Q8NDA2 5059 aa8□□□□□ -1.13
TSPAN17-201ENST00000298564 FLGP20930 4061 aaPredicted RBP7.99□□□□□ -1.13
TSPAN17-201ENST00000298564 LUZP6Q538Z0 58 aa7.89□□□□□ -1.15
TSPAN17-201ENST00000298564 LCE2CQ5TA81 110 aa7.83□□□□□ -1.16
TSPAN17-201ENST00000298564 RNF213Q63HN8 5207 aa7.82□□□□□ -1.16
TSPAN17-201ENST00000298564 PP632Q6XCG6 107 aa7.76□□□□□ -1.17
TSPAN17-201ENST00000298564 UBR4Q5T4S7 5183 aa7.68□□□□□ -1.18
TSPAN17-201ENST00000298564 M0R2T5 61 aa7.67□□□□□ -1.18
TSPAN17-201ENST00000298564 TNP1P09430 55 aa7.66□□□□□ -1.18
TSPAN17-201ENST00000298564 MT1HP80294 61 aa7.63□□□□□ -1.19
TSPAN17-201ENST00000298564 SPRR2GQ9BYE4 73 aa7.56□□□□□ -1.2
TSPAN17-201ENST00000298564 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
TSPAN17-201ENST00000298564 MT1FP04733 61 aa7.47□□□□□ -1.21
TSPAN17-201ENST00000298564 KRTAP10-10P60014 251 aa7.47□□□□□ -1.21
TSPAN17-201ENST00000298564 MT2AP02795 61 aa7.47□□□□□ -1.21
TSPAN17-201ENST00000298564 KRTAP9-8Q9BYQ0 159 aa7.44□□□□□ -1.22
TSPAN17-201ENST00000298564 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
TSPAN17-201ENST00000298564 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
TSPAN17-201ENST00000298564 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
TSPAN17-201ENST00000298564 KRTAP19-8Q3LI54 63 aa7.24□□□□□ -1.25
TSPAN17-201ENST00000298564 MT1BP07438 61 aa7.19□□□□□ -1.26
TSPAN17-201ENST00000298564 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
TSPAN17-201ENST00000298564 KRTAP10-5P60370 271 aa7.11□□□□□ -1.27
TSPAN17-201ENST00000298564 USH2AO75445 5202 aa7.11□□□□□ -1.27
TSPAN17-201ENST00000298564 MT1XP80297 61 aa7.1□□□□□ -1.27
TSPAN17-201ENST00000298564 KMT2DO14686 5537 aa7.05□□□□□ -1.28
TSPAN17-201ENST00000298564 KRTAP8-1Q8IUC2 63 aa6.94□□□□□ -1.3
TSPAN17-201ENST00000298564 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
TSPAN17-201ENST00000298564 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
TSPAN17-201ENST00000298564 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
TSPAN17-201ENST00000298564 LCE2BO14633 110 aa6.88□□□□□ -1.31
TSPAN17-201ENST00000298564 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
TSPAN17-201ENST00000298564 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
TSPAN17-201ENST00000298564 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
TSPAN17-201ENST00000298564 INE1O15225 51 aa6.68□□□□□ -1.34
TSPAN17-201ENST00000298564 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.35
TSPAN17-201ENST00000298564 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.35
TSPAN17-201ENST00000298564 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
TSPAN17-201ENST00000298564 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
TSPAN17-201ENST00000298564 LCE3CQ5T5A8 94 aa6.49□□□□□ -1.37
TSPAN17-201ENST00000298564 KRTAP9-6A8MVA2 160 aa6.44□□□□□ -1.38
TSPAN17-201ENST00000298564 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
TSPAN17-201ENST00000298564 KRTAP19-7Q3SYF9 63 aa6.33□□□□□ -1.4
TSPAN17-201ENST00000298564 SSPOA2VEC9 5147 aa6.33□□□□□ -1.4
TSPAN17-201ENST00000298564 KRTAP19-6Q3LI70 58 aa6.18□□□□□ -1.42
TSPAN17-201ENST00000298564 MT1EP04732 61 aa6.15□□□□□ -1.42
TSPAN17-201ENST00000298564 MT1LQ93083 61 aa6.12□□□□□ -1.43
TSPAN17-201ENST00000298564 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
TSPAN17-201ENST00000298564 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
TSPAN17-201ENST00000298564 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms