RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 A0A1B0GVY2 172 aa7.5□□□□□ -1.21
KDM1B-201ENST00000297792 HSPG2P98160 4391 aa7.49□□□□□ -1.21
KDM1B-201ENST00000297792 FAT3Q8TDW7 4589 aa7.45□□□□□ -1.22
KDM1B-201ENST00000297792 RPL37P61927 97 aaKnown RBP7.45□□□□□ -1.22
KDM1B-201ENST00000297792 SPINT4Q6UDR6 99 aa7.44□□□□□ -1.22
KDM1B-201ENST00000297792 ROMO1P60602 79 aa7.43□□□□□ -1.22
KDM1B-201ENST00000297792 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
KDM1B-201ENST00000297792 S4R3F8 94 aa7.42□□□□□ -1.22
KDM1B-201ENST00000297792 KRTAP13-4Q3LI77 160 aa7.41□□□□□ -1.22
KDM1B-201ENST00000297792 KRTAP10-8P60410 259 aa7.41□□□□□ -1.22
KDM1B-201ENST00000297792 KIAA1109Q2LD37 5005 aa7.4□□□□□ -1.22
KDM1B-201ENST00000297792 RYR3Q15413 4870 aa7.39□□□□□ -1.23
KDM1B-201ENST00000297792 P0C880 135 aa7.38□□□□□ -1.23
KDM1B-201ENST00000297792 Q5VSD8 79 aa7.35□□□□□ -1.23
KDM1B-201ENST00000297792 KRTAP17-1Q9BYP8 105 aa7.34□□□□□ -1.23
KDM1B-201ENST00000297792 KRTAP10-6P60371 365 aaPredicted RBP7.34□□□□□ -1.23
KDM1B-201ENST00000297792 LPAP08519 4548 aa7.33□□□□□ -1.24
KDM1B-201ENST00000297792 TNXBP22105 4242 aa7.32□□□□□ -1.24
KDM1B-201ENST00000297792 KRTAP3-3Q9BYR6 98 aa7.32□□□□□ -1.24
KDM1B-201ENST00000297792 XP32Q5T750 250 aa7.31□□□□□ -1.24
KDM1B-201ENST00000297792 LRP2P98164 4655 aa7.26□□□□□ -1.25
KDM1B-201ENST00000297792 TPRXLQ17RH7 258 aa7.26□□□□□ -1.25
KDM1B-201ENST00000297792 KRTAP3-2Q9BYR7 98 aa7.24□□□□□ -1.25
KDM1B-201ENST00000297792 RYR1P21817 5038 aa7.24□□□□□ -1.25
KDM1B-201ENST00000297792 KRTAP21-3Q3LHN1 58 aa7.23□□□□□ -1.25
KDM1B-201ENST00000297792 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
KDM1B-201ENST00000297792 EPPK1P58107 5090 aaKnown RBP7.17□□□□□ -1.26
KDM1B-201ENST00000297792 ABCA13Q86UQ4 5058 aa7.14□□□□□ -1.27
KDM1B-201ENST00000297792 NDUFAF8A1L188 74 aa7.1□□□□□ -1.27
KDM1B-201ENST00000297792 M0QZ58 72 aa7.08□□□□□ -1.28
KDM1B-201ENST00000297792 KRTAP12-1P59990 96 aa7.07□□□□□ -1.28
KDM1B-201ENST00000297792 MT1HL1P0DM35 61 aa7.06□□□□□ -1.28
KDM1B-201ENST00000297792 R4GN34 69 aa7.03□□□□□ -1.28
KDM1B-201ENST00000297792 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
KDM1B-201ENST00000297792 MUC2Q02817 5179 aa6.9□□□□□ -1.3
KDM1B-201ENST00000297792 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
KDM1B-201ENST00000297792 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
KDM1B-201ENST00000297792 CAMK2N1Q7Z7J9 78 aa6.8□□□□□ -1.32
KDM1B-201ENST00000297792 J3QL48 77 aa6.76□□□□□ -1.33
KDM1B-201ENST00000297792 HERC2O95714 4834 aa6.76□□□□□ -1.33
KDM1B-201ENST00000297792 SEC61BP60468 96 aaKnown RBP6.72□□□□□ -1.33
KDM1B-201ENST00000297792 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
KDM1B-201ENST00000297792 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
KDM1B-201ENST00000297792 MUC17Q685J3 4493 aa6.64□□□□□ -1.35
KDM1B-201ENST00000297792 HERC1Q15751 4861 aa6.61□□□□□ -1.35
KDM1B-201ENST00000297792 FAT4Q6V0I7 4981 aa6.55□□□□□ -1.36
KDM1B-201ENST00000297792 LUZP6Q538Z0 58 aa6.55□□□□□ -1.36
KDM1B-201ENST00000297792 PCLOQ9Y6V0 5065 aa6.45□□□□□ -1.38
KDM1B-201ENST00000297792 RNF213Q63HN8 5207 aa6.45□□□□□ -1.38
KDM1B-201ENST00000297792 KRTAP19-2Q3LHN2 52 aa6.38□□□□□ -1.39
KDM1B-201ENST00000297792 TNP1P09430 55 aa6.36□□□□□ -1.39
KDM1B-201ENST00000297792 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
KDM1B-201ENST00000297792 M0R2T5 61 aa6.35□□□□□ -1.39
KDM1B-201ENST00000297792 BIRC6Q9NR09 4857 aa6.31□□□□□ -1.4
KDM1B-201ENST00000297792 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
KDM1B-201ENST00000297792 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
KDM1B-201ENST00000297792 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
KDM1B-201ENST00000297792 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
KDM1B-201ENST00000297792 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
KDM1B-201ENST00000297792 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
KDM1B-201ENST00000297792 LCE3AQ5TA76 89 aa6□□□□□ -1.45
KDM1B-201ENST00000297792 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
KDM1B-201ENST00000297792 MT1HP80294 61 aa5.93□□□□□ -1.46
KDM1B-201ENST00000297792 MT1FP04733 61 aa5.9□□□□□ -1.47
KDM1B-201ENST00000297792 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
KDM1B-201ENST00000297792 MT2AP02795 61 aa5.85□□□□□ -1.47
KDM1B-201ENST00000297792 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
KDM1B-201ENST00000297792 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
KDM1B-201ENST00000297792 USH2AO75445 5202 aa5.79□□□□□ -1.48
KDM1B-201ENST00000297792 KRTAP9-8Q9BYQ0 159 aa5.76□□□□□ -1.49
KDM1B-201ENST00000297792 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
KDM1B-201ENST00000297792 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
KDM1B-201ENST00000297792 KMT2DO14686 5537 aa5.68□□□□□ -1.5
KDM1B-201ENST00000297792 MT1BP07438 61 aa5.63□□□□□ -1.51
KDM1B-201ENST00000297792 KRTAP10-5P60370 271 aa5.62□□□□□ -1.51
KDM1B-201ENST00000297792 MT1XP80297 61 aa5.61□□□□□ -1.51
KDM1B-201ENST00000297792 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
KDM1B-201ENST00000297792 KRTAP8-1Q8IUC2 63 aa5.61□□□□□ -1.51
KDM1B-201ENST00000297792 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
KDM1B-201ENST00000297792 FSIP2Q5CZC0 6907 aa5.5□□□□□ -1.53
KDM1B-201ENST00000297792 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
KDM1B-201ENST00000297792 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
KDM1B-201ENST00000297792 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.54
KDM1B-201ENST00000297792 LCE2BO14633 110 aa5.39□□□□□ -1.55
KDM1B-201ENST00000297792 INE1O15225 51 aa5.36□□□□□ -1.55
KDM1B-201ENST00000297792 KRTAP4-8A0A0G2JLE6 195 aa5.34□□□□□ -1.55
KDM1B-201ENST00000297792 KRTAP4-8Q9BYQ9 185 aa5.34□□□□□ -1.55
KDM1B-201ENST00000297792 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
KDM1B-201ENST00000297792 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
KDM1B-201ENST00000297792 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
KDM1B-201ENST00000297792 LCE2AQ5TA79 106 aaPredicted RBP5.12□□□□□ -1.59
KDM1B-201ENST00000297792 SSPOA2VEC9 5147 aa5.09□□□□□ -1.59
KDM1B-201ENST00000297792 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
KDM1B-201ENST00000297792 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
KDM1B-201ENST00000297792 MUC12Q9UKN1 5478 aa5□□□□□ -1.61
KDM1B-201ENST00000297792 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
KDM1B-201ENST00000297792 FCGBPQ9Y6R7 5405 aaPredicted RBP4.95□□□□□ -1.62
KDM1B-201ENST00000297792 MT1LQ93083 61 aa4.87□□□□□ -1.63
KDM1B-201ENST00000297792 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
KDM1B-201ENST00000297792 KRTAP4-3Q9BYR4 195 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms