RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
PDPK1-201ENST00000268673 DNAH17Q9UFH2 4485 aa7.05□□□□□ -1.28
PDPK1-201ENST00000268673 LYSTQ99698 3801 aa7.05□□□□□ -1.28
PDPK1-201ENST00000268673 STARD9Q9P2P6 4700 aa7.03□□□□□ -1.28
PDPK1-201ENST00000268673 DNAH8Q96JB1 4490 aa7□□□□□ -1.29
PDPK1-201ENST00000268673 DYNC2H1Q8NCM8 4307 aaKnown RBP6.99□□□□□ -1.29
PDPK1-201ENST00000268673 DNAH11Q96DT5 4516 aa6.91□□□□□ -1.3
PDPK1-201ENST00000268673 DNAH7Q8WXX0 4024 aa6.89□□□□□ -1.31
PDPK1-201ENST00000268673 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
PDPK1-201ENST00000268673 DNAH2Q9P225 4427 aa6.87□□□□□ -1.31
PDPK1-201ENST00000268673 KRTAP10-4P60372 401 aaPredicted RBP6.87□□□□□ -1.31
PDPK1-201ENST00000268673 KMT2AQ03164 3969 aa6.85□□□□□ -1.31
PDPK1-201ENST00000268673 ALMS1Q8TCU4 4167 aa6.84□□□□□ -1.32
PDPK1-201ENST00000268673 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.32
PDPK1-201ENST00000268673 PRKDCP78527 4128 aaKnown RBP6.83□□□□□ -1.32
PDPK1-201ENST00000268673 FRAS1Q86XX4 4008 aa6.82□□□□□ -1.32
PDPK1-201ENST00000268673 LRP1BQ9NZR2 4599 aa6.78□□□□□ -1.32
PDPK1-201ENST00000268673 DNAH5Q8TE73 4624 aa6.73□□□□□ -1.33
PDPK1-201ENST00000268673 KRTAP4-5Q9BYR2 181 aa6.7□□□□□ -1.34
PDPK1-201ENST00000268673 DNAH6Q9C0G6 4158 aa6.66□□□□□ -1.34
PDPK1-201ENST00000268673 VPS13BQ7Z7G8 4022 aa6.62□□□□□ -1.35
PDPK1-201ENST00000268673 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
PDPK1-201ENST00000268673 DNHD1Q96M86 4753 aa6.58□□□□□ -1.36
PDPK1-201ENST00000268673 DYNC1H1Q14204 4646 aaKnown RBP6.58□□□□□ -1.36
PDPK1-201ENST00000268673 INE1O15225 51 aa6.56□□□□□ -1.36
PDPK1-201ENST00000268673 SACSQ9NZJ4 4579 aa6.56□□□□□ -1.36
PDPK1-201ENST00000268673 FAT1Q14517 4588 aa6.51□□□□□ -1.37
PDPK1-201ENST00000268673 LORP23490 312 aaPredicted RBP6.49□□□□□ -1.37
PDPK1-201ENST00000268673 HYDINQ4G0P3 5121 aa6.46□□□□□ -1.37
PDPK1-201ENST00000268673 FAT2Q9NYQ8 4349 aa6.46□□□□□ -1.38
PDPK1-201ENST00000268673 PKD1P98161 4303 aa6.41□□□□□ -1.38
PDPK1-201ENST00000268673 APOBP04114 4563 aaKnown RBP6.31□□□□□ -1.4
PDPK1-201ENST00000268673 PKHD1P08F94 4074 aa6.29□□□□□ -1.4
PDPK1-201ENST00000268673 KRTAP10-12P60413 245 aa6.28□□□□□ -1.4
PDPK1-201ENST00000268673 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
PDPK1-201ENST00000268673 FAT3Q8TDW7 4589 aa6.21□□□□□ -1.42
PDPK1-201ENST00000268673 KRTAP12-3P60328 96 aa6.21□□□□□ -1.42
PDPK1-201ENST00000268673 LRP1Q07954 4544 aaKnown RBP6.18□□□□□ -1.42
PDPK1-201ENST00000268673 PKHD1L1Q86WI1 4243 aa6.18□□□□□ -1.42
PDPK1-201ENST00000268673 MYCBP2O75592 4640 aa6.15□□□□□ -1.42
PDPK1-201ENST00000268673 RYR2Q92736 4967 aa6.15□□□□□ -1.42
PDPK1-201ENST00000268673 KRTAP4-1Q9BYQ7 146 aa6.1□□□□□ -1.43
PDPK1-201ENST00000268673 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
PDPK1-201ENST00000268673 RYR1P21817 5038 aa6.08□□□□□ -1.44
PDPK1-201ENST00000268673 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
PDPK1-201ENST00000268673 KIAA1109Q2LD37 5005 aa6.02□□□□□ -1.45
PDPK1-201ENST00000268673 HSPG2P98160 4391 aa5.98□□□□□ -1.45
PDPK1-201ENST00000268673 TNXBP22105 4242 aa5.98□□□□□ -1.45
PDPK1-201ENST00000268673 RYR3Q15413 4870 aa5.96□□□□□ -1.45
PDPK1-201ENST00000268673 SPRR2GQ9BYE4 73 aa5.95□□□□□ -1.46
PDPK1-201ENST00000268673 MT1HP80294 61 aa5.93□□□□□ -1.46
PDPK1-201ENST00000268673 KMT2CQ8NEZ4 4911 aaKnown RBP5.9□□□□□ -1.47
PDPK1-201ENST00000268673 LRP2P98164 4655 aa5.88□□□□□ -1.47
PDPK1-201ENST00000268673 MT2AP02795 61 aa5.87□□□□□ -1.47
PDPK1-201ENST00000268673 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
PDPK1-201ENST00000268673 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.48
PDPK1-201ENST00000268673 MT1FP04733 61 aa5.75□□□□□ -1.49
PDPK1-201ENST00000268673 LPAP08519 4548 aa5.71□□□□□ -1.5
PDPK1-201ENST00000268673 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.51
PDPK1-201ENST00000268673 KRTAP19-2Q3LHN2 52 aa5.59□□□□□ -1.52
PDPK1-201ENST00000268673 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.52
PDPK1-201ENST00000268673 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
PDPK1-201ENST00000268673 KRTAP19-8Q3LI54 63 aa5.55□□□□□ -1.52
PDPK1-201ENST00000268673 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
PDPK1-201ENST00000268673 HERC2O95714 4834 aa5.54□□□□□ -1.52
PDPK1-201ENST00000268673 EPPK1P58107 5090 aaKnown RBP5.54□□□□□ -1.52
PDPK1-201ENST00000268673 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
PDPK1-201ENST00000268673 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
PDPK1-201ENST00000268673 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
PDPK1-201ENST00000268673 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
PDPK1-201ENST00000268673 MT1XP80297 61 aa5.43□□□□□ -1.54
PDPK1-201ENST00000268673 MUC17Q685J3 4493 aa5.42□□□□□ -1.54
PDPK1-201ENST00000268673 LCE2CQ5TA81 110 aa5.38□□□□□ -1.55
PDPK1-201ENST00000268673 FLGP20930 4061 aaPredicted RBP5.36□□□□□ -1.55
PDPK1-201ENST00000268673 MT1BP07438 61 aa5.36□□□□□ -1.55
PDPK1-201ENST00000268673 BIRC6Q9NR09 4857 aa5.32□□□□□ -1.56
PDPK1-201ENST00000268673 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
PDPK1-201ENST00000268673 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
PDPK1-201ENST00000268673 HERC1Q15751 4861 aa5.3□□□□□ -1.56
PDPK1-201ENST00000268673 MUC2Q02817 5179 aa5.29□□□□□ -1.56
PDPK1-201ENST00000268673 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
PDPK1-201ENST00000268673 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
PDPK1-201ENST00000268673 KRTAP4-8Q9BYQ9 185 aa5.1□□□□□ -1.59
PDPK1-201ENST00000268673 SPRR2EP22531 72 aa5.06□□□□□ -1.6
PDPK1-201ENST00000268673 SPRR2BP35325 72 aa5.06□□□□□ -1.6
PDPK1-201ENST00000268673 SPRR2AP35326 72 aa5.06□□□□□ -1.6
PDPK1-201ENST00000268673 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
PDPK1-201ENST00000268673 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
PDPK1-201ENST00000268673 HMCN2Q8NDA2 5059 aa5.04□□□□□ -1.6
PDPK1-201ENST00000268673 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
PDPK1-201ENST00000268673 MT1GP13640 62 aa4.98□□□□□ -1.61
PDPK1-201ENST00000268673 RNF213Q63HN8 5207 aa4.97□□□□□ -1.61
PDPK1-201ENST00000268673 LCE2BO14633 110 aa4.95□□□□□ -1.62
PDPK1-201ENST00000268673 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
PDPK1-201ENST00000268673 SPRR2DP22532 72 aa4.89□□□□□ -1.63
PDPK1-201ENST00000268673 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
PDPK1-201ENST00000268673 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
PDPK1-201ENST00000268673 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
PDPK1-201ENST00000268673 MT1LQ93083 61 aa4.87□□□□□ -1.63
PDPK1-201ENST00000268673 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms