RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 LORP23490 312 aaPredicted RBP4.58□□□□□ -1.68
CHFR-201ENST00000266880 KRTAP8-1Q8IUC2 63 aa4.57□□□□□ -1.68
CHFR-201ENST00000266880 HECTD4Q9Y4D8 3996 aa4.56□□□□□ -1.68
CHFR-201ENST00000266880 ZNF469Q96JG9 3925 aaPredicted RBP4.55□□□□□ -1.68
CHFR-201ENST00000266880 MT1HL1P0DM35 61 aa4.54□□□□□ -1.68
CHFR-201ENST00000266880 CMYA5Q8N3K9 4069 aa4.53□□□□□ -1.68
CHFR-201ENST00000266880 DNAH7Q8WXX0 4024 aa4.49□□□□□ -1.69
CHFR-201ENST00000266880 HUWE1Q7Z6Z7 4374 aaKnown RBP4.41□□□□□ -1.7
CHFR-201ENST00000266880 DNAH2Q9P225 4427 aa4.41□□□□□ -1.7
CHFR-201ENST00000266880 KRTAP4-5Q9BYR2 181 aa4.37□□□□□ -1.71
CHFR-201ENST00000266880 ANK2Q01484 3957 aa4.33□□□□□ -1.72
CHFR-201ENST00000266880 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
CHFR-201ENST00000266880 DNAH1Q9P2D7 4330 aa4.3□□□□□ -1.72
CHFR-201ENST00000266880 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
CHFR-201ENST00000266880 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
CHFR-201ENST00000266880 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
CHFR-201ENST00000266880 KMT2AQ03164 3969 aa4.22□□□□□ -1.73
CHFR-201ENST00000266880 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
CHFR-201ENST00000266880 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
CHFR-201ENST00000266880 DNAH6Q9C0G6 4158 aa4.17□□□□□ -1.74
CHFR-201ENST00000266880 ANK3Q12955 4377 aaKnown RBP4.17□□□□□ -1.74
CHFR-201ENST00000266880 VPS13BQ7Z7G8 4022 aa4.15□□□□□ -1.74
CHFR-201ENST00000266880 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
CHFR-201ENST00000266880 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.75
CHFR-201ENST00000266880 MT2AP02795 61 aa4.05□□□□□ -1.76
CHFR-201ENST00000266880 SPRR2GQ9BYE4 73 aa4.05□□□□□ -1.76
CHFR-201ENST00000266880 MT1HP80294 61 aa4.04□□□□□ -1.76
CHFR-201ENST00000266880 DNAH10Q8IVF4 4471 aa4.02□□□□□ -1.77
CHFR-201ENST00000266880 MT3P25713 68 aa3.99□□□□□ -1.77
CHFR-201ENST00000266880 MT1FP04733 61 aa3.99□□□□□ -1.77
CHFR-201ENST00000266880 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
CHFR-201ENST00000266880 VPS13DQ5THJ4 4388 aa3.98□□□□□ -1.77
CHFR-201ENST00000266880 FRAS1Q86XX4 4008 aa3.96□□□□□ -1.78
CHFR-201ENST00000266880 DNAH11Q96DT5 4516 aa3.95□□□□□ -1.78
CHFR-201ENST00000266880 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
CHFR-201ENST00000266880 MT1GP13640 62 aa3.94□□□□□ -1.78
CHFR-201ENST00000266880 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
CHFR-201ENST00000266880 DNAH17Q9UFH2 4485 aa3.93□□□□□ -1.78
CHFR-201ENST00000266880 SPRR2EP22531 72 aa3.9□□□□□ -1.78
CHFR-201ENST00000266880 SPRR2BP35325 72 aa3.9□□□□□ -1.78
CHFR-201ENST00000266880 SPRR2AP35326 72 aa3.9□□□□□ -1.78
CHFR-201ENST00000266880 PRKDCP78527 4128 aaKnown RBP3.89□□□□□ -1.79
CHFR-201ENST00000266880 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
CHFR-201ENST00000266880 LRP1Q07954 4544 aaKnown RBP3.81□□□□□ -1.8
CHFR-201ENST00000266880 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
CHFR-201ENST00000266880 SPRR2DP22532 72 aa3.78□□□□□ -1.81
CHFR-201ENST00000266880 MT1XP80297 61 aa3.74□□□□□ -1.81
CHFR-201ENST00000266880 PKHD1P08F94 4074 aa3.74□□□□□ -1.81
CHFR-201ENST00000266880 LCE2BO14633 110 aa3.73□□□□□ -1.81
CHFR-201ENST00000266880 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
CHFR-201ENST00000266880 FAT2Q9NYQ8 4349 aa3.72□□□□□ -1.81
CHFR-201ENST00000266880 PRM1P04553 51 aa3.7□□□□□ -1.82
CHFR-201ENST00000266880 DYNC2H1Q8NCM8 4307 aaKnown RBP3.69□□□□□ -1.82
CHFR-201ENST00000266880 DYNC1H1Q14204 4646 aaKnown RBP3.66□□□□□ -1.82
CHFR-201ENST00000266880 DNAH9Q9NYC9 4486 aa3.66□□□□□ -1.82
CHFR-201ENST00000266880 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
CHFR-201ENST00000266880 KRTAP19-1Q8IUB9 90 aa3.62□□□□□ -1.83
CHFR-201ENST00000266880 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.83
CHFR-201ENST00000266880 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
CHFR-201ENST00000266880 PKHD1L1Q86WI1 4243 aa3.58□□□□□ -1.84
CHFR-201ENST00000266880 DNAH5Q8TE73 4624 aa3.55□□□□□ -1.84
CHFR-201ENST00000266880 KRTAP4-7Q9BYR0 210 aa3.54□□□□□ -1.84
CHFR-201ENST00000266880 PLECQ15149 4684 aaKnown RBP3.54□□□□□ -1.84
CHFR-201ENST00000266880 FAT1Q14517 4588 aa3.54□□□□□ -1.84
CHFR-201ENST00000266880 LCE2CQ5TA81 110 aa3.53□□□□□ -1.84
CHFR-201ENST00000266880 PKD1P98161 4303 aa3.52□□□□□ -1.85
CHFR-201ENST00000266880 MT1BP07438 61 aa3.51□□□□□ -1.85
CHFR-201ENST00000266880 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
CHFR-201ENST00000266880 SACSQ9NZJ4 4579 aa3.48□□□□□ -1.85
CHFR-201ENST00000266880 STARD9Q9P2P6 4700 aa3.47□□□□□ -1.85
CHFR-201ENST00000266880 MT1LQ93083 61 aa3.47□□□□□ -1.85
CHFR-201ENST00000266880 LCE2DQ5TA82 110 aaPredicted RBP3.46□□□□□ -1.86
CHFR-201ENST00000266880 MYCBP2O75592 4640 aa3.46□□□□□ -1.86
CHFR-201ENST00000266880 MT4P47944 62 aa3.46□□□□□ -1.86
CHFR-201ENST00000266880 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
CHFR-201ENST00000266880 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
CHFR-201ENST00000266880 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
CHFR-201ENST00000266880 DNHD1Q96M86 4753 aa3.43□□□□□ -1.86
CHFR-201ENST00000266880 APOBP04114 4563 aaKnown RBP3.41□□□□□ -1.86
CHFR-201ENST00000266880 TNXBP22105 4242 aa3.41□□□□□ -1.86
CHFR-201ENST00000266880 HSPG2P98160 4391 aa3.37□□□□□ -1.87
CHFR-201ENST00000266880 MT1EP04732 61 aa3.37□□□□□ -1.87
CHFR-201ENST00000266880 LRP1BQ9NZR2 4599 aa3.36□□□□□ -1.87
CHFR-201ENST00000266880 RYR1P21817 5038 aa3.35□□□□□ -1.87
CHFR-201ENST00000266880 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.87
CHFR-201ENST00000266880 KRTAP9-3Q9BYQ3 159 aa3.33□□□□□ -1.88
CHFR-201ENST00000266880 MT1MQ8N339 61 aa3.32□□□□□ -1.88
CHFR-201ENST00000266880 RYR3Q15413 4870 aa3.32□□□□□ -1.88
CHFR-201ENST00000266880 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
CHFR-201ENST00000266880 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
CHFR-201ENST00000266880 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
CHFR-201ENST00000266880 KRTAP17-1Q9BYP8 105 aa3.28□□□□□ -1.88
CHFR-201ENST00000266880 RYR2Q92736 4967 aa3.26□□□□□ -1.89
CHFR-201ENST00000266880 PCLOQ9Y6V0 5065 aa3.23□□□□□ -1.89
CHFR-201ENST00000266880 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
CHFR-201ENST00000266880 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
CHFR-201ENST00000266880 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
CHFR-201ENST00000266880 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
CHFR-201ENST00000266880 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
CHFR-201ENST00000266880 MUC17Q685J3 4493 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms