RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 RYR2Q92736 4967 aa2.47□□□□□ -2.01
XRN1-201ENST00000264951 ANK2Q01484 3957 aa2.46□□□□□ -2.01
XRN1-201ENST00000264951 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
XRN1-201ENST00000264951 KIAA1109Q2LD37 5005 aa2.45□□□□□ -2.02
XRN1-201ENST00000264951 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
XRN1-201ENST00000264951 LRP1BQ9NZR2 4599 aa2.45□□□□□ -2.02
XRN1-201ENST00000264951 RYR3Q15413 4870 aa2.45□□□□□ -2.02
XRN1-201ENST00000264951 RYR1P21817 5038 aa2.44□□□□□ -2.02
XRN1-201ENST00000264951 DNAH3Q8TD57 4116 aa2.44□□□□□ -2.02
XRN1-201ENST00000264951 CSMD3Q7Z407 3707 aa2.43□□□□□ -2.02
XRN1-201ENST00000264951 DNAH2Q9P225 4427 aa2.43□□□□□ -2.02
XRN1-201ENST00000264951 CMYA5Q8N3K9 4069 aa2.42□□□□□ -2.02
XRN1-201ENST00000264951 DNAH11Q96DT5 4516 aa2.42□□□□□ -2.02
XRN1-201ENST00000264951 KMT2CQ8NEZ4 4911 aaKnown RBP2.42□□□□□ -2.02
XRN1-201ENST00000264951 DYNC1H1Q14204 4646 aaKnown RBP2.41□□□□□ -2.02
XRN1-201ENST00000264951 KRTAP3-2Q9BYR7 98 aa2.41□□□□□ -2.02
XRN1-201ENST00000264951 LYSTQ99698 3801 aa2.4□□□□□ -2.02
XRN1-201ENST00000264951 PRKDCP78527 4128 aaKnown RBP2.4□□□□□ -2.02
XRN1-201ENST00000264951 PCLOQ9Y6V0 5065 aa2.4□□□□□ -2.02
XRN1-201ENST00000264951 VPS13DQ5THJ4 4388 aa2.4□□□□□ -2.03
XRN1-201ENST00000264951 DNAH8Q96JB1 4490 aa2.39□□□□□ -2.03
XRN1-201ENST00000264951 EPPK1P58107 5090 aaKnown RBP2.39□□□□□ -2.03
XRN1-201ENST00000264951 DNAH17Q9UFH2 4485 aa2.38□□□□□ -2.03
XRN1-201ENST00000264951 DNAH7Q8WXX0 4024 aa2.37□□□□□ -2.03
XRN1-201ENST00000264951 BIRC6Q9NR09 4857 aa2.36□□□□□ -2.03
XRN1-201ENST00000264951 FAT1Q14517 4588 aa2.36□□□□□ -2.03
XRN1-201ENST00000264951 DNAH5Q8TE73 4624 aa2.36□□□□□ -2.03
XRN1-201ENST00000264951 KRTAP3-3Q9BYR6 98 aa2.34□□□□□ -2.03
XRN1-201ENST00000264951 ABCA13Q86UQ4 5058 aa2.34□□□□□ -2.03
XRN1-201ENST00000264951 DYNC2H1Q8NCM8 4307 aaKnown RBP2.34□□□□□ -2.04
XRN1-201ENST00000264951 SACSQ9NZJ4 4579 aa2.33□□□□□ -2.04
XRN1-201ENST00000264951 KRTAP17-1Q9BYP8 105 aa2.32□□□□□ -2.04
XRN1-201ENST00000264951 KRTAP10-5P60370 271 aa2.28□□□□□ -2.04
XRN1-201ENST00000264951 APOBP04114 4563 aaKnown RBP2.28□□□□□ -2.04
XRN1-201ENST00000264951 LCE3AQ5TA76 89 aa2.28□□□□□ -2.05
XRN1-201ENST00000264951 FAT2Q9NYQ8 4349 aa2.27□□□□□ -2.05
XRN1-201ENST00000264951 KMT2AQ03164 3969 aa2.27□□□□□ -2.05
XRN1-201ENST00000264951 UBR4Q5T4S7 5183 aa2.26□□□□□ -2.05
XRN1-201ENST00000264951 LRP1Q07954 4544 aaKnown RBP2.25□□□□□ -2.05
XRN1-201ENST00000264951 CRCT1Q9UGL9 99 aa2.25□□□□□ -2.05
XRN1-201ENST00000264951 PKD1P98161 4303 aa2.25□□□□□ -2.05
XRN1-201ENST00000264951 DNAH6Q9C0G6 4158 aa2.25□□□□□ -2.05
XRN1-201ENST00000264951 MT1HL1P0DM35 61 aa2.23□□□□□ -2.05
XRN1-201ENST00000264951 KRTAP8-1Q8IUC2 63 aa2.21□□□□□ -2.06
XRN1-201ENST00000264951 MYCBP2O75592 4640 aa2.21□□□□□ -2.06
XRN1-201ENST00000264951 FRAS1Q86XX4 4008 aa2.19□□□□□ -2.06
XRN1-201ENST00000264951 KRTAP10-4P60372 401 aaPredicted RBP2.19□□□□□ -2.06
XRN1-201ENST00000264951 HECTD4Q9Y4D8 3996 aa2.18□□□□□ -2.06
XRN1-201ENST00000264951 PKHD1P08F94 4074 aa2.18□□□□□ -2.06
XRN1-201ENST00000264951 HERC2O95714 4834 aa2.17□□□□□ -2.06
XRN1-201ENST00000264951 ALMS1Q8TCU4 4167 aa2.17□□□□□ -2.06
XRN1-201ENST00000264951 MT3P25713 68 aa2.17□□□□□ -2.06
XRN1-201ENST00000264951 FAT3Q8TDW7 4589 aa2.16□□□□□ -2.06
XRN1-201ENST00000264951 RNF213Q63HN8 5207 aa2.16□□□□□ -2.06
XRN1-201ENST00000264951 KRTAP10-7P60409 375 aaPredicted RBP2.14□□□□□ -2.07
XRN1-201ENST00000264951 HERC1Q15751 4861 aa2.13□□□□□ -2.07
XRN1-201ENST00000264951 SPRR2GQ9BYE4 73 aa2.13□□□□□ -2.07
XRN1-201ENST00000264951 KRTAP4-5Q9BYR2 181 aa2.12□□□□□ -2.07
XRN1-201ENST00000264951 HMCN2Q8NDA2 5059 aa2.11□□□□□ -2.07
XRN1-201ENST00000264951 LCE3CQ5T5A8 94 aa2.11□□□□□ -2.07
XRN1-201ENST00000264951 LRP2P98164 4655 aa2.1□□□□□ -2.07
XRN1-201ENST00000264951 MUC2Q02817 5179 aa2.09□□□□□ -2.07
XRN1-201ENST00000264951 HSPG2P98160 4391 aa2.09□□□□□ -2.08
XRN1-201ENST00000264951 FAT4Q6V0I7 4981 aa2.08□□□□□ -2.08
XRN1-201ENST00000264951 VPS13BQ7Z7G8 4022 aa2.07□□□□□ -2.08
XRN1-201ENST00000264951 LORP23490 312 aaPredicted RBP2.07□□□□□ -2.08
XRN1-201ENST00000264951 PKHD1L1Q86WI1 4243 aa2.07□□□□□ -2.08
XRN1-201ENST00000264951 LPAP08519 4548 aa2.06□□□□□ -2.08
XRN1-201ENST00000264951 KRTAP19-5Q3LI72 72 aa2□□□□□ -2.09
XRN1-201ENST00000264951 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
XRN1-201ENST00000264951 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
XRN1-201ENST00000264951 KRTAP4-1Q9BYQ7 146 aa1.98□□□□□ -2.09
XRN1-201ENST00000264951 MT2AP02795 61 aa1.97□□□□□ -2.09
XRN1-201ENST00000264951 TNXBP22105 4242 aa1.97□□□□□ -2.09
XRN1-201ENST00000264951 SPRR2FQ96RM1 72 aa1.96□□□□□ -2.09
XRN1-201ENST00000264951 MT1HP80294 61 aa1.94□□□□□ -2.1
XRN1-201ENST00000264951 KRTAP19-8Q3LI54 63 aa1.94□□□□□ -2.1
XRN1-201ENST00000264951 LCE3EQ5T5B0 92 aa1.94□□□□□ -2.1
XRN1-201ENST00000264951 LCE3DQ9BYE3 92 aa1.93□□□□□ -2.1
XRN1-201ENST00000264951 USH2AO75445 5202 aa1.92□□□□□ -2.1
XRN1-201ENST00000264951 KRTAP19-2Q3LHN2 52 aa1.91□□□□□ -2.1
XRN1-201ENST00000264951 MT1GP13640 62 aa1.91□□□□□ -2.1
XRN1-201ENST00000264951 MUC17Q685J3 4493 aa1.88□□□□□ -2.11
XRN1-201ENST00000264951 MT1FP04733 61 aa1.87□□□□□ -2.11
XRN1-201ENST00000264951 LCE3BQ5TA77 95 aa1.86□□□□□ -2.11
XRN1-201ENST00000264951 LCE2BO14633 110 aa1.82□□□□□ -2.12
XRN1-201ENST00000264951 MT1LQ93083 61 aa1.82□□□□□ -2.12
XRN1-201ENST00000264951 KRTAP19-1Q8IUB9 90 aa1.81□□□□□ -2.12
XRN1-201ENST00000264951 LCE2CQ5TA81 110 aa1.81□□□□□ -2.12
XRN1-201ENST00000264951 SPRR2EP22531 72 aa1.81□□□□□ -2.12
XRN1-201ENST00000264951 SPRR2BP35325 72 aa1.81□□□□□ -2.12
XRN1-201ENST00000264951 SPRR2AP35326 72 aa1.81□□□□□ -2.12
XRN1-201ENST00000264951 MT1XP80297 61 aa1.79□□□□□ -2.12
XRN1-201ENST00000264951 SPRR2DP22532 72 aa1.78□□□□□ -2.12
XRN1-201ENST00000264951 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
XRN1-201ENST00000264951 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
XRN1-201ENST00000264951 LCE2DQ5TA82 110 aaPredicted RBP1.76□□□□□ -2.13
XRN1-201ENST00000264951 KRTAP19-3Q7Z4W3 81 aa1.75□□□□□ -2.13
XRN1-201ENST00000264951 MT1EP04732 61 aa1.72□□□□□ -2.13
XRN1-201ENST00000264951 MT1BP07438 61 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms