RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
CASC3-201ENST00000264645 DNAH5Q8TE73 4624 aa6.79□□□□□ -1.32
CASC3-201ENST00000264645 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
CASC3-201ENST00000264645 LRP1BQ9NZR2 4599 aa6.78□□□□□ -1.32
CASC3-201ENST00000264645 LYSTQ99698 3801 aa6.78□□□□□ -1.32
CASC3-201ENST00000264645 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
CASC3-201ENST00000264645 MT1HL1P0DM35 61 aa6.74□□□□□ -1.33
CASC3-201ENST00000264645 DNAH17Q9UFH2 4485 aa6.73□□□□□ -1.33
CASC3-201ENST00000264645 STARD9Q9P2P6 4700 aa6.7□□□□□ -1.34
CASC3-201ENST00000264645 FAT1Q14517 4588 aa6.7□□□□□ -1.34
CASC3-201ENST00000264645 VPS13DQ5THJ4 4388 aa6.69□□□□□ -1.34
CASC3-201ENST00000264645 FRAS1Q86XX4 4008 aa6.68□□□□□ -1.34
CASC3-201ENST00000264645 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.35
CASC3-201ENST00000264645 MYCBP2O75592 4640 aa6.61□□□□□ -1.35
CASC3-201ENST00000264645 INE1O15225 51 aa6.59□□□□□ -1.35
CASC3-201ENST00000264645 KMT2AQ03164 3969 aa6.59□□□□□ -1.35
CASC3-201ENST00000264645 DNHD1Q96M86 4753 aa6.58□□□□□ -1.36
CASC3-201ENST00000264645 DNAH3Q8TD57 4116 aa6.51□□□□□ -1.37
CASC3-201ENST00000264645 DNAH7Q8WXX0 4024 aa6.51□□□□□ -1.37
CASC3-201ENST00000264645 VPS13BQ7Z7G8 4022 aa6.5□□□□□ -1.37
CASC3-201ENST00000264645 CMYA5Q8N3K9 4069 aa6.49□□□□□ -1.37
CASC3-201ENST00000264645 DYNC1H1Q14204 4646 aaKnown RBP6.46□□□□□ -1.37
CASC3-201ENST00000264645 APOBP04114 4563 aaKnown RBP6.46□□□□□ -1.38
CASC3-201ENST00000264645 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
CASC3-201ENST00000264645 PRKDCP78527 4128 aaKnown RBP6.42□□□□□ -1.38
CASC3-201ENST00000264645 LCE3AQ5TA76 89 aa6.41□□□□□ -1.38
CASC3-201ENST00000264645 DNAH6Q9C0G6 4158 aa6.4□□□□□ -1.38
CASC3-201ENST00000264645 SACSQ9NZJ4 4579 aa6.38□□□□□ -1.39
CASC3-201ENST00000264645 HECTD4Q9Y4D8 3996 aa6.37□□□□□ -1.39
CASC3-201ENST00000264645 KRTAP4-5Q9BYR2 181 aa6.34□□□□□ -1.39
CASC3-201ENST00000264645 KRTAP12-3P60328 96 aa6.31□□□□□ -1.4
CASC3-201ENST00000264645 DYNC2H1Q8NCM8 4307 aaKnown RBP6.3□□□□□ -1.4
CASC3-201ENST00000264645 KRTAP10-12P60413 245 aa6.29□□□□□ -1.4
CASC3-201ENST00000264645 FAT3Q8TDW7 4589 aa6.26□□□□□ -1.41
CASC3-201ENST00000264645 LRP1Q07954 4544 aaKnown RBP6.26□□□□□ -1.41
CASC3-201ENST00000264645 KRTAP4-1Q9BYQ7 146 aa6.26□□□□□ -1.41
CASC3-201ENST00000264645 RYR1P21817 5038 aa6.24□□□□□ -1.41
CASC3-201ENST00000264645 FAT2Q9NYQ8 4349 aa6.15□□□□□ -1.43
CASC3-201ENST00000264645 KIAA1109Q2LD37 5005 aa6.1□□□□□ -1.43
CASC3-201ENST00000264645 LRP2P98164 4655 aa6.09□□□□□ -1.43
CASC3-201ENST00000264645 PKHD1P08F94 4074 aa6.01□□□□□ -1.45
CASC3-201ENST00000264645 HYDINQ4G0P3 5121 aa6□□□□□ -1.45
CASC3-201ENST00000264645 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
CASC3-201ENST00000264645 SPRR2GQ9BYE4 73 aa5.92□□□□□ -1.46
CASC3-201ENST00000264645 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
CASC3-201ENST00000264645 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
CASC3-201ENST00000264645 RYR3Q15413 4870 aa5.88□□□□□ -1.47
CASC3-201ENST00000264645 CRCT1Q9UGL9 99 aa5.88□□□□□ -1.47
CASC3-201ENST00000264645 HSPG2P98160 4391 aa5.87□□□□□ -1.47
CASC3-201ENST00000264645 KMT2CQ8NEZ4 4911 aaKnown RBP5.82□□□□□ -1.48
CASC3-201ENST00000264645 MT2AP02795 61 aa5.77□□□□□ -1.49
CASC3-201ENST00000264645 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
CASC3-201ENST00000264645 PKD1P98161 4303 aa5.74□□□□□ -1.49
CASC3-201ENST00000264645 MT1FP04733 61 aa5.74□□□□□ -1.49
CASC3-201ENST00000264645 MT1HP80294 61 aa5.71□□□□□ -1.5
CASC3-201ENST00000264645 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
CASC3-201ENST00000264645 LPAP08519 4548 aa5.69□□□□□ -1.5
CASC3-201ENST00000264645 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
CASC3-201ENST00000264645 RYR2Q92736 4967 aa5.65□□□□□ -1.5
CASC3-201ENST00000264645 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
CASC3-201ENST00000264645 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.51
CASC3-201ENST00000264645 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
CASC3-201ENST00000264645 MT1XP80297 61 aa5.51□□□□□ -1.53
CASC3-201ENST00000264645 HERC2O95714 4834 aa5.5□□□□□ -1.53
CASC3-201ENST00000264645 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
CASC3-201ENST00000264645 TNXBP22105 4242 aa5.47□□□□□ -1.53
CASC3-201ENST00000264645 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
CASC3-201ENST00000264645 PCLOQ9Y6V0 5065 aa5.42□□□□□ -1.54
CASC3-201ENST00000264645 MUC17Q685J3 4493 aa5.42□□□□□ -1.54
CASC3-201ENST00000264645 MT1BP07438 61 aa5.42□□□□□ -1.54
CASC3-201ENST00000264645 LCE2CQ5TA81 110 aa5.34□□□□□ -1.55
CASC3-201ENST00000264645 EPPK1P58107 5090 aaKnown RBP5.32□□□□□ -1.56
CASC3-201ENST00000264645 KRTAP9-8Q9BYQ0 159 aa5.32□□□□□ -1.56
CASC3-201ENST00000264645 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
CASC3-201ENST00000264645 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
CASC3-201ENST00000264645 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
CASC3-201ENST00000264645 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
CASC3-201ENST00000264645 MUC2Q02817 5179 aa5.24□□□□□ -1.57
CASC3-201ENST00000264645 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
CASC3-201ENST00000264645 ABCA13Q86UQ4 5058 aa5.22□□□□□ -1.57
CASC3-201ENST00000264645 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.57
CASC3-201ENST00000264645 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
CASC3-201ENST00000264645 UBR4Q5T4S7 5183 aa5.19□□□□□ -1.58
CASC3-201ENST00000264645 HERC1Q15751 4861 aa5.13□□□□□ -1.59
CASC3-201ENST00000264645 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
CASC3-201ENST00000264645 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
CASC3-201ENST00000264645 BIRC6Q9NR09 4857 aa5.1□□□□□ -1.59
CASC3-201ENST00000264645 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
CASC3-201ENST00000264645 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.6
CASC3-201ENST00000264645 MT1GP13640 62 aa5.08□□□□□ -1.6
CASC3-201ENST00000264645 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
CASC3-201ENST00000264645 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
CASC3-201ENST00000264645 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
CASC3-201ENST00000264645 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
CASC3-201ENST00000264645 MT1LQ93083 61 aa4.92□□□□□ -1.62
CASC3-201ENST00000264645 LCE2BO14633 110 aa4.9□□□□□ -1.63
CASC3-201ENST00000264645 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
CASC3-201ENST00000264645 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.64
CASC3-201ENST00000264645 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.64
CASC3-201ENST00000264645 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms