RNA–Protein interactions for RNA: ENST00000263665.6

CNTN3-201, Transcript of contactin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN3, Length 4,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-201ENST00000263665 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
CNTN3-201ENST00000263665 SPRR2GQ9BYE4 73 aa2.62□□□□□ -1.99
CNTN3-201ENST00000263665 LCE2DQ5TA82 110 aaPredicted RBP2.6□□□□□ -1.99
CNTN3-201ENST00000263665 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
CNTN3-201ENST00000263665 COL7A1Q02388 2944 aa2.59□□□□□ -2
CNTN3-201ENST00000263665 DNAH3Q8TD57 4116 aa2.59□□□□□ -2
CNTN3-201ENST00000263665 DNAH8Q96JB1 4490 aa2.59□□□□□ -2
CNTN3-201ENST00000263665 CMYA5Q8N3K9 4069 aa2.58□□□□□ -2
CNTN3-201ENST00000263665 AKAP9Q99996 3911 aa2.58□□□□□ -2
CNTN3-201ENST00000263665 VPS13DQ5THJ4 4388 aa2.57□□□□□ -2
CNTN3-201ENST00000263665 MT3P25713 68 aa2.56□□□□□ -2
CNTN3-201ENST00000263665 DNAH1Q9P2D7 4330 aa2.56□□□□□ -2
CNTN3-201ENST00000263665 CSMD2Q7Z408 3487 aa2.56□□□□□ -2
CNTN3-201ENST00000263665 SVEP1Q4LDE5 3571 aa2.55□□□□□ -2
CNTN3-201ENST00000263665 OTOGQ6ZRI0 2925 aa2.55□□□□□ -2
CNTN3-201ENST00000263665 DNAH9Q9NYC9 4486 aa2.5□□□□□ -2.01
CNTN3-201ENST00000263665 DNAH6Q9C0G6 4158 aa2.5□□□□□ -2.01
CNTN3-201ENST00000263665 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
CNTN3-201ENST00000263665 CUBNO60494 3623 aa2.49□□□□□ -2.01
CNTN3-201ENST00000263665 SACSQ9NZJ4 4579 aa2.48□□□□□ -2.01
CNTN3-201ENST00000263665 KRTAP4-5Q9BYR2 181 aa2.47□□□□□ -2.01
CNTN3-201ENST00000263665 FBN1P35555 2871 aaKnown RBP2.47□□□□□ -2.01
CNTN3-201ENST00000263665 DYNC2H1Q8NCM8 4307 aaKnown RBP2.46□□□□□ -2.01
CNTN3-201ENST00000263665 CRCT1Q9UGL9 99 aa2.45□□□□□ -2.02
CNTN3-201ENST00000263665 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
CNTN3-201ENST00000263665 PLECQ15149 4684 aaKnown RBP2.4□□□□□ -2.03
CNTN3-201ENST00000263665 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
CNTN3-201ENST00000263665 TRRAPQ9Y4A5 3859 aa2.39□□□□□ -2.03
CNTN3-201ENST00000263665 LCE2AQ5TA79 106 aaPredicted RBP2.39□□□□□ -2.03
CNTN3-201ENST00000263665 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
CNTN3-201ENST00000263665 LCE2CQ5TA81 110 aa2.38□□□□□ -2.03
CNTN3-201ENST00000263665 APOBP04114 4563 aaKnown RBP2.37□□□□□ -2.03
CNTN3-201ENST00000263665 LOC100996750A0A140TA64 210 aa2.36□□□□□ -2.03
CNTN3-201ENST00000263665 KRTAP9-6A0A140TA67 174 aa2.36□□□□□ -2.03
CNTN3-201ENST00000263665 KRTAP4-6Q9BYQ5 205 aa2.36□□□□□ -2.03
CNTN3-201ENST00000263665 KRTAP10-7P60409 375 aaPredicted RBP2.35□□□□□ -2.03
CNTN3-201ENST00000263665 ZNF469Q96JG9 3925 aaPredicted RBP2.35□□□□□ -2.03
CNTN3-201ENST00000263665 MT1HP80294 61 aa2.35□□□□□ -2.03
CNTN3-201ENST00000263665 KRTAP4-1Q9BYQ7 146 aa2.35□□□□□ -2.03
CNTN3-201ENST00000263665 KRTAP19-1Q8IUB9 90 aa2.34□□□□□ -2.03
CNTN3-201ENST00000263665 DNAH5Q8TE73 4624 aa2.34□□□□□ -2.03
CNTN3-201ENST00000263665 CSMD3Q7Z407 3707 aa2.34□□□□□ -2.03
CNTN3-201ENST00000263665 HSPG2P98160 4391 aa2.34□□□□□ -2.04
CNTN3-201ENST00000263665 ANK2Q01484 3957 aa2.33□□□□□ -2.04
CNTN3-201ENST00000263665 STARD9Q9P2P6 4700 aa2.32□□□□□ -2.04
CNTN3-201ENST00000263665 MT2AP02795 61 aa2.32□□□□□ -2.04
CNTN3-201ENST00000263665 LYSTQ99698 3801 aa2.32□□□□□ -2.04
CNTN3-201ENST00000263665 LCE2BO14633 110 aa2.31□□□□□ -2.04
CNTN3-201ENST00000263665 KRTAP2-3P0C7H8 128 aa2.31□□□□□ -2.04
CNTN3-201ENST00000263665 KRTAP2-4Q9BYR9 128 aa2.31□□□□□ -2.04
CNTN3-201ENST00000263665 KRTAP2-1Q9BYU5 128 aa2.31□□□□□ -2.04
CNTN3-201ENST00000263665 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
CNTN3-201ENST00000263665 LRP1BQ9NZR2 4599 aa2.3□□□□□ -2.04
CNTN3-201ENST00000263665 HECTD4Q9Y4D8 3996 aa2.3□□□□□ -2.04
CNTN3-201ENST00000263665 MT1XP80297 61 aa2.29□□□□□ -2.04
CNTN3-201ENST00000263665 SPRR2FQ96RM1 72 aa2.29□□□□□ -2.04
CNTN3-201ENST00000263665 DNAH7Q8WXX0 4024 aa2.28□□□□□ -2.04
CNTN3-201ENST00000263665 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
CNTN3-201ENST00000263665 LRP1Q07954 4544 aaKnown RBP2.26□□□□□ -2.05
CNTN3-201ENST00000263665 PRKDCP78527 4128 aaKnown RBP2.25□□□□□ -2.05
CNTN3-201ENST00000263665 FAT2Q9NYQ8 4349 aa2.25□□□□□ -2.05
CNTN3-201ENST00000263665 PKHD1L1Q86WI1 4243 aa2.25□□□□□ -2.05
CNTN3-201ENST00000263665 FAT3Q8TDW7 4589 aa2.25□□□□□ -2.05
CNTN3-201ENST00000263665 FAT1Q14517 4588 aa2.25□□□□□ -2.05
CNTN3-201ENST00000263665 MT1FP04733 61 aa2.24□□□□□ -2.05
CNTN3-201ENST00000263665 VPS13BQ7Z7G8 4022 aa2.24□□□□□ -2.05
CNTN3-201ENST00000263665 MYCBP2O75592 4640 aa2.24□□□□□ -2.05
CNTN3-201ENST00000263665 DNHD1Q96M86 4753 aa2.24□□□□□ -2.05
CNTN3-201ENST00000263665 PRM1P04553 51 aa2.24□□□□□ -2.05
CNTN3-201ENST00000263665 PKD1P98161 4303 aa2.22□□□□□ -2.05
CNTN3-201ENST00000263665 FRAS1Q86XX4 4008 aa2.21□□□□□ -2.05
CNTN3-201ENST00000263665 MT1BP07438 61 aa2.21□□□□□ -2.06
CNTN3-201ENST00000263665 MT1LQ93083 61 aa2.19□□□□□ -2.06
CNTN3-201ENST00000263665 SPRR2EP22531 72 aa2.19□□□□□ -2.06
CNTN3-201ENST00000263665 SPRR2BP35325 72 aa2.19□□□□□ -2.06
CNTN3-201ENST00000263665 SPRR2AP35326 72 aa2.19□□□□□ -2.06
CNTN3-201ENST00000263665 KRTAP19-2Q3LHN2 52 aa2.19□□□□□ -2.06
CNTN3-201ENST00000263665 MT1EP04732 61 aa2.17□□□□□ -2.06
CNTN3-201ENST00000263665 PKHD1P08F94 4074 aa2.16□□□□□ -2.06
CNTN3-201ENST00000263665 LCE3BQ5TA77 95 aa2.15□□□□□ -2.06
CNTN3-201ENST00000263665 HERC1Q15751 4861 aa2.15□□□□□ -2.07
CNTN3-201ENST00000263665 SPRR2DP22532 72 aa2.14□□□□□ -2.07
CNTN3-201ENST00000263665 TNXBP22105 4242 aa2.14□□□□□ -2.07
CNTN3-201ENST00000263665 MT1GP13640 62 aa2.11□□□□□ -2.07
CNTN3-201ENST00000263665 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
CNTN3-201ENST00000263665 MT1AP04731 61 aa2.09□□□□□ -2.07
CNTN3-201ENST00000263665 KRTAP9-8Q9BYQ0 159 aa2.09□□□□□ -2.08
CNTN3-201ENST00000263665 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
CNTN3-201ENST00000263665 KMT2AQ03164 3969 aa2.05□□□□□ -2.08
CNTN3-201ENST00000263665 BIRC6Q9NR09 4857 aa2.04□□□□□ -2.08
CNTN3-201ENST00000263665 HYDINQ4G0P3 5121 aa2.04□□□□□ -2.08
CNTN3-201ENST00000263665 KRTAP9-3Q9BYQ3 159 aa2.04□□□□□ -2.08
CNTN3-201ENST00000263665 FLGP20930 4061 aaPredicted RBP2.03□□□□□ -2.08
CNTN3-201ENST00000263665 RYR2Q92736 4967 aa2.03□□□□□ -2.08
CNTN3-201ENST00000263665 MUC17Q685J3 4493 aa2.03□□□□□ -2.08
CNTN3-201ENST00000263665 KRTAP9-7A8MTY7 169 aa2.02□□□□□ -2.09
CNTN3-201ENST00000263665 KRTAP9-2Q9BYQ4 174 aa2.02□□□□□ -2.09
CNTN3-201ENST00000263665 KRTAP5-3Q6L8H2 238 aa2.01□□□□□ -2.09
CNTN3-201ENST00000263665 RYR1P21817 5038 aa2□□□□□ -2.09
CNTN3-201ENST00000263665 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms