RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 KRTAP10-4P60372 401 aaPredicted RBP6.08□□□□□ -1.44
CCDC6-201ENST00000263102 ANK3Q12955 4377 aaKnown RBP6.06□□□□□ -1.44
CCDC6-201ENST00000263102 CSMD3Q7Z407 3707 aa6.06□□□□□ -1.44
CCDC6-201ENST00000263102 MEGF8Q7Z7M0 2845 aa6.03□□□□□ -1.44
CCDC6-201ENST00000263102 MT1HP80294 61 aa5.98□□□□□ -1.45
CCDC6-201ENST00000263102 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.45
CCDC6-201ENST00000263102 HUWE1Q7Z6Z7 4374 aaKnown RBP5.94□□□□□ -1.46
CCDC6-201ENST00000263102 SPRR2EP22531 72 aa5.91□□□□□ -1.46
CCDC6-201ENST00000263102 SPRR2BP35325 72 aa5.91□□□□□ -1.46
CCDC6-201ENST00000263102 SPRR2AP35326 72 aa5.91□□□□□ -1.46
CCDC6-201ENST00000263102 ZNF469Q96JG9 3925 aaPredicted RBP5.84□□□□□ -1.47
CCDC6-201ENST00000263102 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
CCDC6-201ENST00000263102 MT2AP02795 61 aa5.81□□□□□ -1.48
CCDC6-201ENST00000263102 KRTAP19-5Q3LI72 72 aa5.8□□□□□ -1.48
CCDC6-201ENST00000263102 SPRR2DP22532 72 aa5.72□□□□□ -1.49
CCDC6-201ENST00000263102 MT1FP04733 61 aa5.68□□□□□ -1.5
CCDC6-201ENST00000263102 AKAP9Q99996 3911 aa5.63□□□□□ -1.51
CCDC6-201ENST00000263102 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
CCDC6-201ENST00000263102 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
CCDC6-201ENST00000263102 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
CCDC6-201ENST00000263102 DNAH2Q9P225 4427 aa5.55□□□□□ -1.52
CCDC6-201ENST00000263102 LCE2BO14633 110 aa5.54□□□□□ -1.52
CCDC6-201ENST00000263102 DNAH1Q9P2D7 4330 aa5.51□□□□□ -1.53
CCDC6-201ENST00000263102 DNAH5Q8TE73 4624 aa5.48□□□□□ -1.53
CCDC6-201ENST00000263102 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
CCDC6-201ENST00000263102 MT1GP13640 62 aa5.43□□□□□ -1.54
CCDC6-201ENST00000263102 DNAH9Q9NYC9 4486 aa5.41□□□□□ -1.54
CCDC6-201ENST00000263102 DNAH10Q8IVF4 4471 aa5.4□□□□□ -1.55
CCDC6-201ENST00000263102 PLECQ15149 4684 aaKnown RBP5.38□□□□□ -1.55
CCDC6-201ENST00000263102 DNAH11Q96DT5 4516 aa5.29□□□□□ -1.56
CCDC6-201ENST00000263102 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
CCDC6-201ENST00000263102 LCE2DQ5TA82 110 aaPredicted RBP5.24□□□□□ -1.57
CCDC6-201ENST00000263102 DNAH17Q9UFH2 4485 aa5.23□□□□□ -1.57
CCDC6-201ENST00000263102 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
CCDC6-201ENST00000263102 FAT1Q14517 4588 aa5.22□□□□□ -1.57
CCDC6-201ENST00000263102 KRTAP19-1Q8IUB9 90 aa5.2□□□□□ -1.58
CCDC6-201ENST00000263102 MT4P47944 62 aa5.16□□□□□ -1.58
CCDC6-201ENST00000263102 FAT2Q9NYQ8 4349 aa5.16□□□□□ -1.58
CCDC6-201ENST00000263102 DNAH8Q96JB1 4490 aa5.15□□□□□ -1.59
CCDC6-201ENST00000263102 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
CCDC6-201ENST00000263102 KRTAP4-8Q9BYQ9 185 aa5.13□□□□□ -1.59
CCDC6-201ENST00000263102 DNHD1Q96M86 4753 aa5.13□□□□□ -1.59
CCDC6-201ENST00000263102 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
CCDC6-201ENST00000263102 LCE3DQ9BYE3 92 aa5.09□□□□□ -1.59
CCDC6-201ENST00000263102 MYCBP2O75592 4640 aa5.09□□□□□ -1.6
CCDC6-201ENST00000263102 DYNC1H1Q14204 4646 aaKnown RBP5.08□□□□□ -1.6
CCDC6-201ENST00000263102 LRP1BQ9NZR2 4599 aa5.07□□□□□ -1.6
CCDC6-201ENST00000263102 MT1XP80297 61 aa5.06□□□□□ -1.6
CCDC6-201ENST00000263102 LYSTQ99698 3801 aa5.06□□□□□ -1.6
CCDC6-201ENST00000263102 RYR1P21817 5038 aa5.04□□□□□ -1.6
CCDC6-201ENST00000263102 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
CCDC6-201ENST00000263102 STARD9Q9P2P6 4700 aa5.02□□□□□ -1.61
CCDC6-201ENST00000263102 ANK2Q01484 3957 aa5.02□□□□□ -1.61
CCDC6-201ENST00000263102 SACSQ9NZJ4 4579 aa5.01□□□□□ -1.61
CCDC6-201ENST00000263102 KRTAP17-1Q9BYP8 105 aa5.01□□□□□ -1.61
CCDC6-201ENST00000263102 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
CCDC6-201ENST00000263102 LCE1BQ5T7P3 118 aa4.96□□□□□ -1.62
CCDC6-201ENST00000263102 DNAH3Q8TD57 4116 aa4.95□□□□□ -1.62
CCDC6-201ENST00000263102 KMT2AQ03164 3969 aa4.95□□□□□ -1.62
CCDC6-201ENST00000263102 VPS13DQ5THJ4 4388 aa4.94□□□□□ -1.62
CCDC6-201ENST00000263102 MT1BP07438 61 aa4.94□□□□□ -1.62
CCDC6-201ENST00000263102 VPS13BQ7Z7G8 4022 aa4.93□□□□□ -1.62
CCDC6-201ENST00000263102 FRAS1Q86XX4 4008 aa4.93□□□□□ -1.62
CCDC6-201ENST00000263102 DYNC2H1Q8NCM8 4307 aaKnown RBP4.93□□□□□ -1.62
CCDC6-201ENST00000263102 LRP1Q07954 4544 aaKnown RBP4.9□□□□□ -1.62
CCDC6-201ENST00000263102 APOBP04114 4563 aaKnown RBP4.89□□□□□ -1.63
CCDC6-201ENST00000263102 PRKDCP78527 4128 aaKnown RBP4.89□□□□□ -1.63
CCDC6-201ENST00000263102 FAT3Q8TDW7 4589 aa4.88□□□□□ -1.63
CCDC6-201ENST00000263102 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
CCDC6-201ENST00000263102 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
CCDC6-201ENST00000263102 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
CCDC6-201ENST00000263102 RYR3Q15413 4870 aa4.86□□□□□ -1.63
CCDC6-201ENST00000263102 HERC1Q15751 4861 aa4.83□□□□□ -1.64
CCDC6-201ENST00000263102 KRTAP9-2Q9BYQ4 174 aa4.83□□□□□ -1.64
CCDC6-201ENST00000263102 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
CCDC6-201ENST00000263102 DNAH7Q8WXX0 4024 aa4.83□□□□□ -1.64
CCDC6-201ENST00000263102 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
CCDC6-201ENST00000263102 DNAH6Q9C0G6 4158 aa4.78□□□□□ -1.64
CCDC6-201ENST00000263102 KIAA1109Q2LD37 5005 aa4.76□□□□□ -1.65
CCDC6-201ENST00000263102 CMYA5Q8N3K9 4069 aa4.76□□□□□ -1.65
CCDC6-201ENST00000263102 MT3P25713 68 aa4.73□□□□□ -1.65
CCDC6-201ENST00000263102 LCE5AQ5TCM9 118 aa4.7□□□□□ -1.66
CCDC6-201ENST00000263102 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
CCDC6-201ENST00000263102 PKHD1L1Q86WI1 4243 aa4.68□□□□□ -1.66
CCDC6-201ENST00000263102 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
CCDC6-201ENST00000263102 MT1LQ93083 61 aa4.67□□□□□ -1.66
CCDC6-201ENST00000263102 LOC100996750A0A140TA64 210 aa4.64□□□□□ -1.67
CCDC6-201ENST00000263102 PRM1P04553 51 aa4.64□□□□□ -1.67
CCDC6-201ENST00000263102 HECTD4Q9Y4D8 3996 aa4.64□□□□□ -1.67
CCDC6-201ENST00000263102 MT1EP04732 61 aa4.62□□□□□ -1.67
CCDC6-201ENST00000263102 LRP2P98164 4655 aa4.6□□□□□ -1.67
CCDC6-201ENST00000263102 KRTAP19-6Q3LI70 58 aa4.6□□□□□ -1.67
CCDC6-201ENST00000263102 MT1MQ8N339 61 aa4.57□□□□□ -1.68
CCDC6-201ENST00000263102 HYDINQ4G0P3 5121 aa4.57□□□□□ -1.68
CCDC6-201ENST00000263102 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
CCDC6-201ENST00000263102 PKHD1P08F94 4074 aa4.56□□□□□ -1.68
CCDC6-201ENST00000263102 PKD1P98161 4303 aa4.54□□□□□ -1.68
CCDC6-201ENST00000263102 HSPG2P98160 4391 aa4.49□□□□□ -1.69
CCDC6-201ENST00000263102 LCE1CQ5T751 118 aa4.45□□□□□ -1.7
CCDC6-201ENST00000263102 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms