RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 DNAH17Q9UFH2 4485 aa7.29□□□□□ -1.24
SYT1-201ENST00000261205 ANK2Q01484 3957 aa7.26□□□□□ -1.25
SYT1-201ENST00000261205 H3BS24 57 aa7.25□□□□□ -1.25
SYT1-201ENST00000261205 DYNC1H1Q14204 4646 aaKnown RBP7.23□□□□□ -1.25
SYT1-201ENST00000261205 KRTAP3-2Q9BYR7 98 aa7.21□□□□□ -1.25
SYT1-201ENST00000261205 STARD9Q9P2P6 4700 aa7.16□□□□□ -1.26
SYT1-201ENST00000261205 DNAH3Q8TD57 4116 aa7.13□□□□□ -1.27
SYT1-201ENST00000261205 LRP1BQ9NZR2 4599 aa7.12□□□□□ -1.27
SYT1-201ENST00000261205 PRKDCP78527 4128 aaKnown RBP7.12□□□□□ -1.27
SYT1-201ENST00000261205 DYNC2H1Q8NCM8 4307 aaKnown RBP7.11□□□□□ -1.27
SYT1-201ENST00000261205 NDUFAF8A1L188 74 aa7.09□□□□□ -1.27
SYT1-201ENST00000261205 DNAH2Q9P225 4427 aa7.08□□□□□ -1.28
SYT1-201ENST00000261205 FAT2Q9NYQ8 4349 aa7.05□□□□□ -1.28
SYT1-201ENST00000261205 DNAH6Q9C0G6 4158 aa6.98□□□□□ -1.29
SYT1-201ENST00000261205 CSMD3Q7Z407 3707 aa6.96□□□□□ -1.29
SYT1-201ENST00000261205 FAT1Q14517 4588 aa6.96□□□□□ -1.3
SYT1-201ENST00000261205 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
SYT1-201ENST00000261205 SACSQ9NZJ4 4579 aa6.95□□□□□ -1.3
SYT1-201ENST00000261205 RYR1P21817 5038 aa6.94□□□□□ -1.3
SYT1-201ENST00000261205 CMYA5Q8N3K9 4069 aa6.89□□□□□ -1.31
SYT1-201ENST00000261205 MT1HP80294 61 aa6.88□□□□□ -1.31
SYT1-201ENST00000261205 KRTAP10-12P60413 245 aa6.87□□□□□ -1.31
SYT1-201ENST00000261205 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
SYT1-201ENST00000261205 DNAH8Q96JB1 4490 aa6.83□□□□□ -1.32
SYT1-201ENST00000261205 KRTAP15-1Q3LI76 137 aa6.82□□□□□ -1.32
SYT1-201ENST00000261205 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
SYT1-201ENST00000261205 RYR3Q15413 4870 aa6.79□□□□□ -1.32
SYT1-201ENST00000261205 RYR2Q92736 4967 aa6.78□□□□□ -1.32
SYT1-201ENST00000261205 KMT2AQ03164 3969 aa6.77□□□□□ -1.33
SYT1-201ENST00000261205 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
SYT1-201ENST00000261205 KRTAP17-1Q9BYP8 105 aa6.76□□□□□ -1.33
SYT1-201ENST00000261205 MT2AP02795 61 aa6.73□□□□□ -1.33
SYT1-201ENST00000261205 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
SYT1-201ENST00000261205 BIRC6Q9NR09 4857 aa6.68□□□□□ -1.34
SYT1-201ENST00000261205 DNAH7Q8WXX0 4024 aa6.65□□□□□ -1.34
SYT1-201ENST00000261205 APOBP04114 4563 aaKnown RBP6.63□□□□□ -1.35
SYT1-201ENST00000261205 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
SYT1-201ENST00000261205 VPS13BQ7Z7G8 4022 aa6.61□□□□□ -1.35
SYT1-201ENST00000261205 MT1FP04733 61 aa6.56□□□□□ -1.36
SYT1-201ENST00000261205 HECTD4Q9Y4D8 3996 aa6.55□□□□□ -1.36
SYT1-201ENST00000261205 FAT3Q8TDW7 4589 aa6.53□□□□□ -1.36
SYT1-201ENST00000261205 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
SYT1-201ENST00000261205 HERC2O95714 4834 aa6.51□□□□□ -1.37
SYT1-201ENST00000261205 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
SYT1-201ENST00000261205 LYSTQ99698 3801 aa6.45□□□□□ -1.38
SYT1-201ENST00000261205 HSPG2P98160 4391 aa6.39□□□□□ -1.39
SYT1-201ENST00000261205 HYDINQ4G0P3 5121 aa6.39□□□□□ -1.39
SYT1-201ENST00000261205 LRP1Q07954 4544 aaKnown RBP6.38□□□□□ -1.39
SYT1-201ENST00000261205 KRTAP19-8Q3LI54 63 aa6.37□□□□□ -1.39
SYT1-201ENST00000261205 HERC1Q15751 4861 aa6.36□□□□□ -1.39
SYT1-201ENST00000261205 MYCBP2O75592 4640 aa6.34□□□□□ -1.39
SYT1-201ENST00000261205 FRAS1Q86XX4 4008 aa6.3□□□□□ -1.4
SYT1-201ENST00000261205 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
SYT1-201ENST00000261205 PKD1P98161 4303 aa6.27□□□□□ -1.41
SYT1-201ENST00000261205 LCE2CQ5TA81 110 aa6.27□□□□□ -1.41
SYT1-201ENST00000261205 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
SYT1-201ENST00000261205 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
SYT1-201ENST00000261205 PKHD1L1Q86WI1 4243 aa6.19□□□□□ -1.42
SYT1-201ENST00000261205 PKHD1P08F94 4074 aa6.18□□□□□ -1.42
SYT1-201ENST00000261205 KMT2CQ8NEZ4 4911 aaKnown RBP6.17□□□□□ -1.42
SYT1-201ENST00000261205 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
SYT1-201ENST00000261205 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
SYT1-201ENST00000261205 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
SYT1-201ENST00000261205 KRTAP9-3Q9BYQ3 159 aa6.09□□□□□ -1.44
SYT1-201ENST00000261205 KRTAP19-2Q3LHN2 52 aa6.08□□□□□ -1.44
SYT1-201ENST00000261205 MT1BP07438 61 aa6.06□□□□□ -1.44
SYT1-201ENST00000261205 INE1O15225 51 aa6.06□□□□□ -1.44
SYT1-201ENST00000261205 SPRR2FQ96RM1 72 aa6.06□□□□□ -1.44
SYT1-201ENST00000261205 LRP2P98164 4655 aa6.06□□□□□ -1.44
SYT1-201ENST00000261205 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
SYT1-201ENST00000261205 MT1XP80297 61 aa5.99□□□□□ -1.45
SYT1-201ENST00000261205 EPPK1P58107 5090 aaKnown RBP5.96□□□□□ -1.46
SYT1-201ENST00000261205 TNXBP22105 4242 aa5.96□□□□□ -1.46
SYT1-201ENST00000261205 ABCA13Q86UQ4 5058 aa5.92□□□□□ -1.46
SYT1-201ENST00000261205 KRTAP10-7P60409 375 aaPredicted RBP5.91□□□□□ -1.46
SYT1-201ENST00000261205 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
SYT1-201ENST00000261205 LCE2AQ5TA79 106 aaPredicted RBP5.78□□□□□ -1.48
SYT1-201ENST00000261205 MUC17Q685J3 4493 aa5.78□□□□□ -1.48
SYT1-201ENST00000261205 LCE2BO14633 110 aa5.77□□□□□ -1.49
SYT1-201ENST00000261205 LPAP08519 4548 aa5.76□□□□□ -1.49
SYT1-201ENST00000261205 SPRR2EP22531 72 aa5.74□□□□□ -1.49
SYT1-201ENST00000261205 SPRR2BP35325 72 aa5.74□□□□□ -1.49
SYT1-201ENST00000261205 SPRR2AP35326 72 aa5.74□□□□□ -1.49
SYT1-201ENST00000261205 LCE2DQ5TA82 110 aaPredicted RBP5.72□□□□□ -1.49
SYT1-201ENST00000261205 FLGP20930 4061 aaPredicted RBP5.72□□□□□ -1.49
SYT1-201ENST00000261205 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
SYT1-201ENST00000261205 MT1GP13640 62 aa5.67□□□□□ -1.5
SYT1-201ENST00000261205 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
SYT1-201ENST00000261205 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
SYT1-201ENST00000261205 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
SYT1-201ENST00000261205 RNF213Q63HN8 5207 aa5.57□□□□□ -1.52
SYT1-201ENST00000261205 SPRR2DP22532 72 aa5.57□□□□□ -1.52
SYT1-201ENST00000261205 FAT4Q6V0I7 4981 aa5.55□□□□□ -1.52
SYT1-201ENST00000261205 HMCN2Q8NDA2 5059 aa5.53□□□□□ -1.52
SYT1-201ENST00000261205 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
SYT1-201ENST00000261205 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
SYT1-201ENST00000261205 UBR4Q5T4S7 5183 aa5.45□□□□□ -1.54
SYT1-201ENST00000261205 MT1EP04732 61 aa5.41□□□□□ -1.54
SYT1-201ENST00000261205 MT1LQ93083 61 aa5.38□□□□□ -1.55
SYT1-201ENST00000261205 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms