RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 KRTAP3-2Q9BYR7 98 aa5.23□□□□□ -1.57
SORL1-201ENST00000260197 KRTAP3-3Q9BYR6 98 aa5.22□□□□□ -1.57
SORL1-201ENST00000260197 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
SORL1-201ENST00000260197 MT1HL1P0DM35 61 aa5.12□□□□□ -1.59
SORL1-201ENST00000260197 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
SORL1-201ENST00000260197 DNAH2Q9P225 4427 aa5.08□□□□□ -1.6
SORL1-201ENST00000260197 DNAH1Q9P2D7 4330 aa5.07□□□□□ -1.6
SORL1-201ENST00000260197 DNAH6Q9C0G6 4158 aa5.04□□□□□ -1.6
SORL1-201ENST00000260197 ANK3Q12955 4377 aaKnown RBP5.04□□□□□ -1.6
SORL1-201ENST00000260197 FRAS1Q86XX4 4008 aa5.04□□□□□ -1.6
SORL1-201ENST00000260197 KRTAP10-4P60372 401 aaPredicted RBP5□□□□□ -1.61
SORL1-201ENST00000260197 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
SORL1-201ENST00000260197 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
SORL1-201ENST00000260197 HUWE1Q7Z6Z7 4374 aaKnown RBP4.93□□□□□ -1.62
SORL1-201ENST00000260197 PRKDCP78527 4128 aaKnown RBP4.92□□□□□ -1.62
SORL1-201ENST00000260197 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
SORL1-201ENST00000260197 FLGP20930 4061 aaPredicted RBP4.81□□□□□ -1.64
SORL1-201ENST00000260197 KRTAP8-1Q8IUC2 63 aa4.76□□□□□ -1.65
SORL1-201ENST00000260197 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
SORL1-201ENST00000260197 LORP23490 312 aaPredicted RBP4.72□□□□□ -1.65
SORL1-201ENST00000260197 PKHD1P08F94 4074 aa4.7□□□□□ -1.66
SORL1-201ENST00000260197 DNAH10Q8IVF4 4471 aa4.63□□□□□ -1.67
SORL1-201ENST00000260197 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
SORL1-201ENST00000260197 FAT2Q9NYQ8 4349 aa4.58□□□□□ -1.68
SORL1-201ENST00000260197 VPS13DQ5THJ4 4388 aa4.5□□□□□ -1.69
SORL1-201ENST00000260197 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
SORL1-201ENST00000260197 MT1HP80294 61 aa4.49□□□□□ -1.69
SORL1-201ENST00000260197 DYNC2H1Q8NCM8 4307 aaKnown RBP4.48□□□□□ -1.69
SORL1-201ENST00000260197 STARD9Q9P2P6 4700 aa4.48□□□□□ -1.69
SORL1-201ENST00000260197 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
SORL1-201ENST00000260197 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
SORL1-201ENST00000260197 KRTAP4-1Q9BYQ7 146 aa4.47□□□□□ -1.69
SORL1-201ENST00000260197 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
SORL1-201ENST00000260197 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.7
SORL1-201ENST00000260197 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
SORL1-201ENST00000260197 DNAH9Q9NYC9 4486 aa4.43□□□□□ -1.7
SORL1-201ENST00000260197 MT2AP02795 61 aa4.43□□□□□ -1.7
SORL1-201ENST00000260197 DNAH11Q96DT5 4516 aa4.39□□□□□ -1.71
SORL1-201ENST00000260197 SPRR2FQ96RM1 72 aa4.36□□□□□ -1.71
SORL1-201ENST00000260197 MT1FP04733 61 aa4.34□□□□□ -1.72
SORL1-201ENST00000260197 PKD1P98161 4303 aa4.29□□□□□ -1.72
SORL1-201ENST00000260197 PLECQ15149 4684 aaKnown RBP4.19□□□□□ -1.74
SORL1-201ENST00000260197 DNAH8Q96JB1 4490 aa4.16□□□□□ -1.74
SORL1-201ENST00000260197 LCE3BQ5TA77 95 aa4.15□□□□□ -1.74
SORL1-201ENST00000260197 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
SORL1-201ENST00000260197 DNAH5Q8TE73 4624 aa4.13□□□□□ -1.75
SORL1-201ENST00000260197 MT1XP80297 61 aa4.11□□□□□ -1.75
SORL1-201ENST00000260197 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
SORL1-201ENST00000260197 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
SORL1-201ENST00000260197 SPRR2EP22531 72 aa4.05□□□□□ -1.76
SORL1-201ENST00000260197 SPRR2BP35325 72 aa4.05□□□□□ -1.76
SORL1-201ENST00000260197 SPRR2AP35326 72 aa4.05□□□□□ -1.76
SORL1-201ENST00000260197 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
SORL1-201ENST00000260197 LRP1Q07954 4544 aaKnown RBP4.03□□□□□ -1.76
SORL1-201ENST00000260197 TNXBP22105 4242 aa4.01□□□□□ -1.77
SORL1-201ENST00000260197 HSPG2P98160 4391 aa4.01□□□□□ -1.77
SORL1-201ENST00000260197 LCE2BO14633 110 aa3.98□□□□□ -1.77
SORL1-201ENST00000260197 MT1GP13640 62 aa3.97□□□□□ -1.77
SORL1-201ENST00000260197 SPRR2DP22532 72 aa3.95□□□□□ -1.78
SORL1-201ENST00000260197 DYNC1H1Q14204 4646 aaKnown RBP3.94□□□□□ -1.78
SORL1-201ENST00000260197 APOBP04114 4563 aaKnown RBP3.92□□□□□ -1.78
SORL1-201ENST00000260197 LRP1BQ9NZR2 4599 aa3.92□□□□□ -1.78
SORL1-201ENST00000260197 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
SORL1-201ENST00000260197 MT1BP07438 61 aa3.88□□□□□ -1.79
SORL1-201ENST00000260197 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
SORL1-201ENST00000260197 RYR1P21817 5038 aa3.84□□□□□ -1.79
SORL1-201ENST00000260197 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
SORL1-201ENST00000260197 KRTAP9-3Q9BYQ3 159 aa3.81□□□□□ -1.8
SORL1-201ENST00000260197 SACSQ9NZJ4 4579 aa3.78□□□□□ -1.8
SORL1-201ENST00000260197 FAT1Q14517 4588 aa3.78□□□□□ -1.8
SORL1-201ENST00000260197 MYCBP2O75592 4640 aa3.78□□□□□ -1.8
SORL1-201ENST00000260197 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
SORL1-201ENST00000260197 MT1LQ93083 61 aa3.76□□□□□ -1.81
SORL1-201ENST00000260197 KRTAP4-8A0A0G2JLE6 195 aa3.76□□□□□ -1.81
SORL1-201ENST00000260197 KRTAP4-8Q9BYQ9 185 aa3.76□□□□□ -1.81
SORL1-201ENST00000260197 KRTAP17-1Q9BYP8 105 aa3.74□□□□□ -1.81
SORL1-201ENST00000260197 FAT3Q8TDW7 4589 aa3.72□□□□□ -1.81
SORL1-201ENST00000260197 LCE2CQ5TA81 110 aa3.72□□□□□ -1.81
SORL1-201ENST00000260197 DNHD1Q96M86 4753 aa3.71□□□□□ -1.82
SORL1-201ENST00000260197 MT1EP04732 61 aa3.7□□□□□ -1.82
SORL1-201ENST00000260197 MUC17Q685J3 4493 aa3.61□□□□□ -1.83
SORL1-201ENST00000260197 MT1MQ8N339 61 aa3.6□□□□□ -1.83
SORL1-201ENST00000260197 RYR3Q15413 4870 aa3.6□□□□□ -1.83
SORL1-201ENST00000260197 PRM1P04553 51 aa3.58□□□□□ -1.84
SORL1-201ENST00000260197 LRP2P98164 4655 aa3.56□□□□□ -1.84
SORL1-201ENST00000260197 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
SORL1-201ENST00000260197 LCE2DQ5TA82 110 aaPredicted RBP3.55□□□□□ -1.84
SORL1-201ENST00000260197 MT3P25713 68 aa3.55□□□□□ -1.84
SORL1-201ENST00000260197 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
SORL1-201ENST00000260197 KRTAP19-2Q3LHN2 52 aa3.54□□□□□ -1.84
SORL1-201ENST00000260197 MT4P47944 62 aa3.49□□□□□ -1.85
SORL1-201ENST00000260197 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.85
SORL1-201ENST00000260197 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
SORL1-201ENST00000260197 LPAP08519 4548 aa3.42□□□□□ -1.86
SORL1-201ENST00000260197 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
SORL1-201ENST00000260197 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
SORL1-201ENST00000260197 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
SORL1-201ENST00000260197 LCE1DQ5T752 114 aa3.4□□□□□ -1.86
SORL1-201ENST00000260197 RYR2Q92736 4967 aa3.35□□□□□ -1.87
SORL1-201ENST00000260197 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms