RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ALMS1Q8TCU4 4167 aa1.75□□□□□ -2.13
RNF38-201ENST00000259605 LRBAP50851 2863 aa1.75□□□□□ -2.13
RNF38-201ENST00000259605 KRTAP19-4Q3LI73 84 aa1.75□□□□□ -2.13
RNF38-201ENST00000259605 DYNC2H1Q8NCM8 4307 aaKnown RBP1.74□□□□□ -2.13
RNF38-201ENST00000259605 RYR3Q15413 4870 aa1.74□□□□□ -2.13
RNF38-201ENST00000259605 NBPF19A0A087WUL8 3843 aa1.74□□□□□ -2.13
RNF38-201ENST00000259605 ZZEF1O43149 2961 aa1.73□□□□□ -2.13
RNF38-201ENST00000259605 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
RNF38-201ENST00000259605 FREM2Q5SZK8 3169 aa1.73□□□□□ -2.13
RNF38-201ENST00000259605 SRRM2Q9UQ35 2752 aaKnown RBP1.73□□□□□ -2.13
RNF38-201ENST00000259605 CSMD3Q7Z407 3707 aa1.72□□□□□ -2.13
RNF38-201ENST00000259605 SPRR2EP22531 72 aa1.72□□□□□ -2.13
RNF38-201ENST00000259605 SPRR2BP35325 72 aa1.72□□□□□ -2.13
RNF38-201ENST00000259605 SPRR2AP35326 72 aa1.72□□□□□ -2.13
RNF38-201ENST00000259605 DCHS2Q6V1P9 2916 aa1.71□□□□□ -2.14
RNF38-201ENST00000259605 KRTAP10-4P60372 401 aaPredicted RBP1.71□□□□□ -2.14
RNF38-201ENST00000259605 VWFP04275 2813 aa1.71□□□□□ -2.14
RNF38-201ENST00000259605 KRTAP10-5P60370 271 aa1.69□□□□□ -2.14
RNF38-201ENST00000259605 SPRR2DP22532 72 aa1.69□□□□□ -2.14
RNF38-201ENST00000259605 KRTAP4-11Q9BYQ6 195 aa1.69□□□□□ -2.14
RNF38-201ENST00000259605 TGP01266 2768 aa1.69□□□□□ -2.14
RNF38-201ENST00000259605 BOD1L1Q8NFC6 3051 aa1.69□□□□□ -2.14
RNF38-201ENST00000259605 HERC2O95714 4834 aa1.69□□□□□ -2.14
RNF38-201ENST00000259605 ANK2Q01484 3957 aa1.69□□□□□ -2.14
RNF38-201ENST00000259605 COL12A1Q99715 3063 aa1.69□□□□□ -2.14
RNF38-201ENST00000259605 WDFY4Q6ZS81 3184 aa1.68□□□□□ -2.14
RNF38-201ENST00000259605 ANK3Q12955 4377 aaKnown RBP1.68□□□□□ -2.14
RNF38-201ENST00000259605 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
RNF38-201ENST00000259605 MEGF8Q7Z7M0 2845 aa1.68□□□□□ -2.14
RNF38-201ENST00000259605 CELSR1Q9NYQ6 3014 aa1.68□□□□□ -2.14
RNF38-201ENST00000259605 ADGRG4Q8IZF6 3080 aa1.67□□□□□ -2.14
RNF38-201ENST00000259605 MT1HP80294 61 aa1.67□□□□□ -2.14
RNF38-201ENST00000259605 AKAP9Q99996 3911 aa1.66□□□□□ -2.14
RNF38-201ENST00000259605 CSMD1Q96PZ7 3565 aa1.66□□□□□ -2.14
RNF38-201ENST00000259605 LCE1DQ5T752 114 aa1.65□□□□□ -2.15
RNF38-201ENST00000259605 PCLOQ9Y6V0 5065 aa1.64□□□□□ -2.15
RNF38-201ENST00000259605 DNAH1Q9P2D7 4330 aa1.64□□□□□ -2.15
RNF38-201ENST00000259605 FAT3Q8TDW7 4589 aa1.64□□□□□ -2.15
RNF38-201ENST00000259605 KRTAP19-1Q8IUB9 90 aa1.63□□□□□ -2.15
RNF38-201ENST00000259605 ZANQ9Y493 2812 aa1.63□□□□□ -2.15
RNF38-201ENST00000259605 RYR2Q92736 4967 aa1.63□□□□□ -2.15
RNF38-201ENST00000259605 LCE3AQ5TA76 89 aa1.63□□□□□ -2.15
RNF38-201ENST00000259605 LRP1BQ9NZR2 4599 aa1.63□□□□□ -2.15
RNF38-201ENST00000259605 ATMQ13315 3056 aa1.63□□□□□ -2.15
RNF38-201ENST00000259605 MT2AP02795 61 aa1.62□□□□□ -2.15
RNF38-201ENST00000259605 KIAA1109Q2LD37 5005 aa1.62□□□□□ -2.15
RNF38-201ENST00000259605 KRTAP9-7A8MTY7 169 aa1.62□□□□□ -2.15
RNF38-201ENST00000259605 SVEP1Q4LDE5 3571 aa1.62□□□□□ -2.15
RNF38-201ENST00000259605 LCE4AQ5TA78 99 aa1.61□□□□□ -2.15
RNF38-201ENST00000259605 DNAH11Q96DT5 4516 aa1.61□□□□□ -2.15
RNF38-201ENST00000259605 KRTAP5-4Q6L8H1 288 aa1.6□□□□□ -2.15
RNF38-201ENST00000259605 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.16
RNF38-201ENST00000259605 CUBNO60494 3623 aa1.59□□□□□ -2.16
RNF38-201ENST00000259605 SPRR2GQ9BYE4 73 aa1.58□□□□□ -2.16
RNF38-201ENST00000259605 HUWE1Q7Z6Z7 4374 aaKnown RBP1.58□□□□□ -2.16
RNF38-201ENST00000259605 RYR1P21817 5038 aa1.57□□□□□ -2.16
RNF38-201ENST00000259605 DNAH3Q8TD57 4116 aa1.56□□□□□ -2.16
RNF38-201ENST00000259605 KRTAP20-1Q3LI63 56 aa1.55□□□□□ -2.16
RNF38-201ENST00000259605 DNAH9Q9NYC9 4486 aa1.54□□□□□ -2.16
RNF38-201ENST00000259605 DNAH10Q8IVF4 4471 aa1.54□□□□□ -2.16
RNF38-201ENST00000259605 PRKDCP78527 4128 aaKnown RBP1.54□□□□□ -2.16
RNF38-201ENST00000259605 DYNC1H1Q14204 4646 aaKnown RBP1.54□□□□□ -2.16
RNF38-201ENST00000259605 MT1FP04733 61 aa1.54□□□□□ -2.16
RNF38-201ENST00000259605 HERC1Q15751 4861 aa1.53□□□□□ -2.16
RNF38-201ENST00000259605 SACSQ9NZJ4 4579 aa1.53□□□□□ -2.16
RNF38-201ENST00000259605 LCE5AQ5TCM9 118 aa1.53□□□□□ -2.16
RNF38-201ENST00000259605 COL7A1Q02388 2944 aa1.53□□□□□ -2.17
RNF38-201ENST00000259605 EPPK1P58107 5090 aaKnown RBP1.52□□□□□ -2.17
RNF38-201ENST00000259605 KMT2CQ8NEZ4 4911 aaKnown RBP1.52□□□□□ -2.17
RNF38-201ENST00000259605 MT1GP13640 62 aa1.52□□□□□ -2.17
RNF38-201ENST00000259605 ABCA13Q86UQ4 5058 aa1.52□□□□□ -2.17
RNF38-201ENST00000259605 PKHD1L1Q86WI1 4243 aa1.5□□□□□ -2.17
RNF38-201ENST00000259605 DNAH6Q9C0G6 4158 aa1.5□□□□□ -2.17
RNF38-201ENST00000259605 TRRAPQ9Y4A5 3859 aa1.5□□□□□ -2.17
RNF38-201ENST00000259605 KRTAP19-5Q3LI72 72 aa1.49□□□□□ -2.17
RNF38-201ENST00000259605 PLECQ15149 4684 aaKnown RBP1.49□□□□□ -2.17
RNF38-201ENST00000259605 HYDINQ4G0P3 5121 aa1.49□□□□□ -2.17
RNF38-201ENST00000259605 MYCBP2O75592 4640 aa1.49□□□□□ -2.17
RNF38-201ENST00000259605 LYSTQ99698 3801 aa1.49□□□□□ -2.17
RNF38-201ENST00000259605 HRNRQ86YZ3 2850 aaPredicted RBP1.49□□□□□ -2.17
RNF38-201ENST00000259605 ZNF469Q96JG9 3925 aaPredicted RBP1.48□□□□□ -2.17
RNF38-201ENST00000259605 KRTAP4-1Q9BYQ7 146 aa1.48□□□□□ -2.17
RNF38-201ENST00000259605 KRTAP19-8Q3LI54 63 aa1.48□□□□□ -2.17
RNF38-201ENST00000259605 VPS13CQ709C8 3753 aa1.47□□□□□ -2.17
RNF38-201ENST00000259605 LCE3CQ5T5A8 94 aa1.47□□□□□ -2.17
RNF38-201ENST00000259605 DNAH17Q9UFH2 4485 aa1.47□□□□□ -2.17
RNF38-201ENST00000259605 LCE3BQ5TA77 95 aa1.46□□□□□ -2.18
RNF38-201ENST00000259605 KRTAP2-3P0C7H8 128 aa1.45□□□□□ -2.18
RNF38-201ENST00000259605 KRTAP2-4Q9BYR9 128 aa1.45□□□□□ -2.18
RNF38-201ENST00000259605 KMT2AQ03164 3969 aa1.44□□□□□ -2.18
RNF38-201ENST00000259605 DNAH7Q8WXX0 4024 aa1.44□□□□□ -2.18
RNF38-201ENST00000259605 KRTAP9-3Q9BYQ3 159 aa1.43□□□□□ -2.18
RNF38-201ENST00000259605 KRTAP6-3Q3LI67 103 aa1.43□□□□□ -2.18
RNF38-201ENST00000259605 CMYA5Q8N3K9 4069 aa1.43□□□□□ -2.18
RNF38-201ENST00000259605 LRP2P98164 4655 aa1.43□□□□□ -2.18
RNF38-201ENST00000259605 FAT2Q9NYQ8 4349 aa1.43□□□□□ -2.18
RNF38-201ENST00000259605 DNAH2Q9P225 4427 aa1.42□□□□□ -2.18
RNF38-201ENST00000259605 HECTD4Q9Y4D8 3996 aa1.42□□□□□ -2.18
RNF38-201ENST00000259605 MT4P47944 62 aa1.42□□□□□ -2.18
RNF38-201ENST00000259605 LRP1Q07954 4544 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms