RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 COX6B2Q6YFQ2 88 aa2.56□□□□□ -2
USP44-201ENST00000258499 DNAH3Q8TD57 4116 aa2.56□□□□□ -2
USP44-201ENST00000258499 H0YAA0 97 aa2.55□□□□□ -2
USP44-201ENST00000258499 DNAH8Q96JB1 4490 aa2.55□□□□□ -2
USP44-201ENST00000258499 A8MUU9 505 aa2.55□□□□□ -2
USP44-201ENST00000258499 RPS29P62273 56 aaKnown RBP2.54□□□□□ -2
USP44-201ENST00000258499 C20orf166-AS1Q96NR2 134 aa2.54□□□□□ -2
USP44-201ENST00000258499 SPINT4Q6UDR6 99 aa2.54□□□□□ -2
USP44-201ENST00000258499 KRTAP9-7A8MTY7 169 aa2.53□□□□□ -2
USP44-201ENST00000258499 VPS13DQ5THJ4 4388 aa2.53□□□□□ -2
USP44-201ENST00000258499 Q5VSD8 79 aa2.52□□□□□ -2.01
USP44-201ENST00000258499 LRP1BQ9NZR2 4599 aa2.52□□□□□ -2.01
USP44-201ENST00000258499 DNAH17Q9UFH2 4485 aa2.52□□□□□ -2.01
USP44-201ENST00000258499 SEC61BP60468 96 aaKnown RBP2.52□□□□□ -2.01
USP44-201ENST00000258499 S4R3F8 94 aa2.52□□□□□ -2.01
USP44-201ENST00000258499 DNHD1Q96M86 4753 aa2.51□□□□□ -2.01
USP44-201ENST00000258499 RPL37P61927 97 aaKnown RBP2.51□□□□□ -2.01
USP44-201ENST00000258499 KRTAP25-1Q3LHN0 102 aa2.5□□□□□ -2.01
USP44-201ENST00000258499 KRTAP3-1Q9BYR8 98 aa2.5□□□□□ -2.01
USP44-201ENST00000258499 DNAH6Q9C0G6 4158 aa2.49□□□□□ -2.01
USP44-201ENST00000258499 DNAH2Q9P225 4427 aa2.49□□□□□ -2.01
USP44-201ENST00000258499 ROMO1P60602 79 aa2.49□□□□□ -2.01
USP44-201ENST00000258499 HECTD4Q9Y4D8 3996 aa2.47□□□□□ -2.01
USP44-201ENST00000258499 FAT1Q14517 4588 aa2.47□□□□□ -2.01
USP44-201ENST00000258499 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.01
USP44-201ENST00000258499 DNAH5Q8TE73 4624 aa2.46□□□□□ -2.01
USP44-201ENST00000258499 VPS13BQ7Z7G8 4022 aa2.45□□□□□ -2.02
USP44-201ENST00000258499 A0A1B0GVY2 172 aa2.44□□□□□ -2.02
USP44-201ENST00000258499 P0C880 135 aa2.44□□□□□ -2.02
USP44-201ENST00000258499 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
USP44-201ENST00000258499 DYNC2H1Q8NCM8 4307 aaKnown RBP2.43□□□□□ -2.02
USP44-201ENST00000258499 KRTAP10-8P60410 259 aa2.43□□□□□ -2.02
USP44-201ENST00000258499 R4GN34 69 aa2.42□□□□□ -2.02
USP44-201ENST00000258499 M0QZ58 72 aa2.41□□□□□ -2.02
USP44-201ENST00000258499 KRTAP13-4Q3LI77 160 aa2.41□□□□□ -2.02
USP44-201ENST00000258499 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.02
USP44-201ENST00000258499 HYDINQ4G0P3 5121 aa2.4□□□□□ -2.02
USP44-201ENST00000258499 ALMS1Q8TCU4 4167 aa2.4□□□□□ -2.03
USP44-201ENST00000258499 KRTAP10-6P60371 365 aaPredicted RBP2.39□□□□□ -2.03
USP44-201ENST00000258499 MYCBP2O75592 4640 aa2.39□□□□□ -2.03
USP44-201ENST00000258499 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
USP44-201ENST00000258499 PKHD1P08F94 4074 aa2.39□□□□□ -2.03
USP44-201ENST00000258499 KRTAP21-3Q3LHN1 58 aa2.38□□□□□ -2.03
USP44-201ENST00000258499 KRTAP12-2P59991 146 aa2.37□□□□□ -2.03
USP44-201ENST00000258499 CAMK2N1Q7Z7J9 78 aa2.36□□□□□ -2.03
USP44-201ENST00000258499 NDUFAF8A1L188 74 aa2.36□□□□□ -2.03
USP44-201ENST00000258499 TPRXLQ17RH7 258 aa2.36□□□□□ -2.03
USP44-201ENST00000258499 LRP1Q07954 4544 aaKnown RBP2.35□□□□□ -2.03
USP44-201ENST00000258499 SACSQ9NZJ4 4579 aa2.34□□□□□ -2.03
USP44-201ENST00000258499 KRTAP19-4Q3LI73 84 aa2.34□□□□□ -2.03
USP44-201ENST00000258499 FAT2Q9NYQ8 4349 aa2.33□□□□□ -2.04
USP44-201ENST00000258499 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
USP44-201ENST00000258499 APOBP04114 4563 aaKnown RBP2.31□□□□□ -2.04
USP44-201ENST00000258499 FAT3Q8TDW7 4589 aa2.31□□□□□ -2.04
USP44-201ENST00000258499 MT1HL1P0DM35 61 aa2.31□□□□□ -2.04
USP44-201ENST00000258499 PKD1P98161 4303 aa2.3□□□□□ -2.04
USP44-201ENST00000258499 KIAA1109Q2LD37 5005 aa2.29□□□□□ -2.04
USP44-201ENST00000258499 KRTAP23-1A1A580 65 aa2.28□□□□□ -2.04
USP44-201ENST00000258499 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
USP44-201ENST00000258499 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
USP44-201ENST00000258499 RYR1P21817 5038 aa2.26□□□□□ -2.05
USP44-201ENST00000258499 KMT2CQ8NEZ4 4911 aaKnown RBP2.26□□□□□ -2.05
USP44-201ENST00000258499 M0R2T5 61 aa2.25□□□□□ -2.05
USP44-201ENST00000258499 RYR3Q15413 4870 aa2.24□□□□□ -2.05
USP44-201ENST00000258499 LRP2P98164 4655 aa2.24□□□□□ -2.05
USP44-201ENST00000258499 PLAC4Q8WY50 150 aa2.23□□□□□ -2.05
USP44-201ENST00000258499 HSPG2P98160 4391 aa2.23□□□□□ -2.05
USP44-201ENST00000258499 RYR2Q92736 4967 aa2.21□□□□□ -2.06
USP44-201ENST00000258499 KRTAP15-1Q3LI76 137 aa2.2□□□□□ -2.06
USP44-201ENST00000258499 PKHD1L1Q86WI1 4243 aa2.19□□□□□ -2.06
USP44-201ENST00000258499 TNP1P09430 55 aa2.18□□□□□ -2.06
USP44-201ENST00000258499 LPAP08519 4548 aa2.16□□□□□ -2.06
USP44-201ENST00000258499 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
USP44-201ENST00000258499 KRTAP4-1Q9BYQ7 146 aa2.16□□□□□ -2.06
USP44-201ENST00000258499 TNXBP22105 4242 aa2.15□□□□□ -2.07
USP44-201ENST00000258499 KRTAP5-9P26371 169 aa2.14□□□□□ -2.07
USP44-201ENST00000258499 KRTAP10-10P60014 251 aa2.1□□□□□ -2.07
USP44-201ENST00000258499 ABCA13Q86UQ4 5058 aa2.09□□□□□ -2.08
USP44-201ENST00000258499 EPPK1P58107 5090 aaKnown RBP2.09□□□□□ -2.08
USP44-201ENST00000258499 HERC2O95714 4834 aa2.08□□□□□ -2.08
USP44-201ENST00000258499 MUC2Q02817 5179 aa2.07□□□□□ -2.08
USP44-201ENST00000258499 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
USP44-201ENST00000258499 KRTAP5-4Q6L8H1 288 aa2.04□□□□□ -2.08
USP44-201ENST00000258499 LCE3AQ5TA76 89 aa1.99□□□□□ -2.09
USP44-201ENST00000258499 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
USP44-201ENST00000258499 KRTAP19-2Q3LHN2 52 aa1.98□□□□□ -2.09
USP44-201ENST00000258499 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
USP44-201ENST00000258499 HERC1Q15751 4861 aa1.96□□□□□ -2.1
USP44-201ENST00000258499 MUC17Q685J3 4493 aa1.95□□□□□ -2.1
USP44-201ENST00000258499 RNF213Q63HN8 5207 aa1.94□□□□□ -2.1
USP44-201ENST00000258499 MT1HP80294 61 aa1.94□□□□□ -2.1
USP44-201ENST00000258499 SPRR2GQ9BYE4 73 aa1.94□□□□□ -2.1
USP44-201ENST00000258499 MT1FP04733 61 aa1.94□□□□□ -2.1
USP44-201ENST00000258499 MT2AP02795 61 aa1.93□□□□□ -2.1
USP44-201ENST00000258499 KRTAP10-12P60413 245 aa1.93□□□□□ -2.1
USP44-201ENST00000258499 PRO2289Q9P1D8 64 aa1.93□□□□□ -2.1
USP44-201ENST00000258499 FLGP20930 4061 aaPredicted RBP1.92□□□□□ -2.1
USP44-201ENST00000258499 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
USP44-201ENST00000258499 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
USP44-201ENST00000258499 PCLOQ9Y6V0 5065 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms