RNA–Protein interactions for RNA: ENST00000255390.9

SCO1-201, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCO1, Length 9,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-201ENST00000255390 KRTAP4-5Q9BYR2 181 aa4.71□□□□□ -1.66
SCO1-201ENST00000255390 BSNQ9UPA5 3926 aa4.62□□□□□ -1.67
SCO1-201ENST00000255390 SPRR2FQ96RM1 72 aa4.61□□□□□ -1.67
SCO1-201ENST00000255390 ALMS1Q8TCU4 4167 aa4.6□□□□□ -1.67
SCO1-201ENST00000255390 LYSTQ99698 3801 aa4.5□□□□□ -1.69
SCO1-201ENST00000255390 CMYA5Q8N3K9 4069 aa4.42□□□□□ -1.7
SCO1-201ENST00000255390 KRTAP10-4P60372 401 aaPredicted RBP4.41□□□□□ -1.7
SCO1-201ENST00000255390 SPRR2EP22531 72 aa4.39□□□□□ -1.71
SCO1-201ENST00000255390 SPRR2BP35325 72 aa4.39□□□□□ -1.71
SCO1-201ENST00000255390 SPRR2AP35326 72 aa4.39□□□□□ -1.71
SCO1-201ENST00000255390 DNAH2Q9P225 4427 aa4.38□□□□□ -1.71
SCO1-201ENST00000255390 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
SCO1-201ENST00000255390 DNAH1Q9P2D7 4330 aa4.38□□□□□ -1.71
SCO1-201ENST00000255390 HUWE1Q7Z6Z7 4374 aaKnown RBP4.38□□□□□ -1.71
SCO1-201ENST00000255390 MT1HP80294 61 aa4.36□□□□□ -1.71
SCO1-201ENST00000255390 DNAH7Q8WXX0 4024 aa4.36□□□□□ -1.71
SCO1-201ENST00000255390 ANK3Q12955 4377 aaKnown RBP4.35□□□□□ -1.71
SCO1-201ENST00000255390 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
SCO1-201ENST00000255390 ANK2Q01484 3957 aa4.34□□□□□ -1.72
SCO1-201ENST00000255390 ZNF469Q96JG9 3925 aaPredicted RBP4.33□□□□□ -1.72
SCO1-201ENST00000255390 FRAS1Q86XX4 4008 aa4.3□□□□□ -1.72
SCO1-201ENST00000255390 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
SCO1-201ENST00000255390 VPS13BQ7Z7G8 4022 aa4.28□□□□□ -1.72
SCO1-201ENST00000255390 DNAH3Q8TD57 4116 aa4.26□□□□□ -1.73
SCO1-201ENST00000255390 SPRR2DP22532 72 aa4.26□□□□□ -1.73
SCO1-201ENST00000255390 KMT2AQ03164 3969 aa4.25□□□□□ -1.73
SCO1-201ENST00000255390 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
SCO1-201ENST00000255390 MT2AP02795 61 aa4.24□□□□□ -1.73
SCO1-201ENST00000255390 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
SCO1-201ENST00000255390 LCE2BO14633 110 aa4.2□□□□□ -1.74
SCO1-201ENST00000255390 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
SCO1-201ENST00000255390 KRTAP4-1Q9BYQ7 146 aa4.16□□□□□ -1.74
SCO1-201ENST00000255390 DNAH6Q9C0G6 4158 aa4.15□□□□□ -1.74
SCO1-201ENST00000255390 HECTD4Q9Y4D8 3996 aa4.13□□□□□ -1.75
SCO1-201ENST00000255390 MT1FP04733 61 aa4.13□□□□□ -1.75
SCO1-201ENST00000255390 MT1GP13640 62 aa4.05□□□□□ -1.76
SCO1-201ENST00000255390 LCE2CQ5TA81 110 aa4□□□□□ -1.77
SCO1-201ENST00000255390 FLGP20930 4061 aaPredicted RBP3.98□□□□□ -1.77
SCO1-201ENST00000255390 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.77
SCO1-201ENST00000255390 FAT2Q9NYQ8 4349 aa3.96□□□□□ -1.78
SCO1-201ENST00000255390 LCE2DQ5TA82 110 aaPredicted RBP3.92□□□□□ -1.78
SCO1-201ENST00000255390 DNAH8Q96JB1 4490 aa3.91□□□□□ -1.78
SCO1-201ENST00000255390 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
SCO1-201ENST00000255390 DNAH9Q9NYC9 4486 aa3.85□□□□□ -1.79
SCO1-201ENST00000255390 DNAH17Q9UFH2 4485 aa3.85□□□□□ -1.79
SCO1-201ENST00000255390 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
SCO1-201ENST00000255390 PRKDCP78527 4128 aaKnown RBP3.83□□□□□ -1.8
SCO1-201ENST00000255390 MT4P47944 62 aa3.82□□□□□ -1.8
SCO1-201ENST00000255390 DNAH10Q8IVF4 4471 aa3.81□□□□□ -1.8
SCO1-201ENST00000255390 KRTAP19-1Q8IUB9 90 aa3.78□□□□□ -1.8
SCO1-201ENST00000255390 MT1XP80297 61 aa3.77□□□□□ -1.81
SCO1-201ENST00000255390 VPS13DQ5THJ4 4388 aa3.77□□□□□ -1.81
SCO1-201ENST00000255390 KRTAP19-8Q3LI54 63 aa3.77□□□□□ -1.81
SCO1-201ENST00000255390 DYNC2H1Q8NCM8 4307 aaKnown RBP3.75□□□□□ -1.81
SCO1-201ENST00000255390 DNAH11Q96DT5 4516 aa3.75□□□□□ -1.81
SCO1-201ENST00000255390 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
SCO1-201ENST00000255390 KRTAP4-8A0A0G2JLE6 195 aa3.72□□□□□ -1.81
SCO1-201ENST00000255390 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
SCO1-201ENST00000255390 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
SCO1-201ENST00000255390 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
SCO1-201ENST00000255390 DNAH5Q8TE73 4624 aa3.66□□□□□ -1.82
SCO1-201ENST00000255390 PKHD1P08F94 4074 aa3.64□□□□□ -1.83
SCO1-201ENST00000255390 PRM1P04553 51 aa3.63□□□□□ -1.83
SCO1-201ENST00000255390 MT3P25713 68 aa3.63□□□□□ -1.83
SCO1-201ENST00000255390 LRP1Q07954 4544 aaKnown RBP3.62□□□□□ -1.83
SCO1-201ENST00000255390 PKHD1L1Q86WI1 4243 aa3.6□□□□□ -1.83
SCO1-201ENST00000255390 MT1BP07438 61 aa3.58□□□□□ -1.84
SCO1-201ENST00000255390 MT1LQ93083 61 aa3.57□□□□□ -1.84
SCO1-201ENST00000255390 STARD9Q9P2P6 4700 aa3.56□□□□□ -1.84
SCO1-201ENST00000255390 KRTAP9-8Q9BYQ0 159 aa3.56□□□□□ -1.84
SCO1-201ENST00000255390 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
SCO1-201ENST00000255390 PLECQ15149 4684 aaKnown RBP3.52□□□□□ -1.85
SCO1-201ENST00000255390 FAT1Q14517 4588 aa3.52□□□□□ -1.85
SCO1-201ENST00000255390 PKD1P98161 4303 aa3.52□□□□□ -1.85
SCO1-201ENST00000255390 KRTAP9-3Q9BYQ3 159 aa3.5□□□□□ -1.85
SCO1-201ENST00000255390 LRP1BQ9NZR2 4599 aa3.49□□□□□ -1.85
SCO1-201ENST00000255390 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
SCO1-201ENST00000255390 APOBP04114 4563 aaKnown RBP3.46□□□□□ -1.85
SCO1-201ENST00000255390 MT1EP04732 61 aa3.45□□□□□ -1.86
SCO1-201ENST00000255390 KRTAP9-2Q9BYQ4 174 aa3.43□□□□□ -1.86
SCO1-201ENST00000255390 MT1MQ8N339 61 aa3.41□□□□□ -1.86
SCO1-201ENST00000255390 SACSQ9NZJ4 4579 aa3.41□□□□□ -1.86
SCO1-201ENST00000255390 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
SCO1-201ENST00000255390 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
SCO1-201ENST00000255390 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
SCO1-201ENST00000255390 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
SCO1-201ENST00000255390 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.87
SCO1-201ENST00000255390 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
SCO1-201ENST00000255390 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
SCO1-201ENST00000255390 KRTAP17-1Q9BYP8 105 aa3.33□□□□□ -1.88
SCO1-201ENST00000255390 TNXBP22105 4242 aa3.32□□□□□ -1.88
SCO1-201ENST00000255390 DYNC1H1Q14204 4646 aaKnown RBP3.32□□□□□ -1.88
SCO1-201ENST00000255390 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
SCO1-201ENST00000255390 KRTAP9-6A0A140TA67 174 aa3.28□□□□□ -1.88
SCO1-201ENST00000255390 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
SCO1-201ENST00000255390 HSPG2P98160 4391 aa3.27□□□□□ -1.89
SCO1-201ENST00000255390 MYCBP2O75592 4640 aa3.19□□□□□ -1.9
SCO1-201ENST00000255390 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
SCO1-201ENST00000255390 LPAP08519 4548 aa3.18□□□□□ -1.9
SCO1-201ENST00000255390 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms