RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 KRTAP10-1P60331 282 aa3.6□□□□□ -1.83
USP29-201ENST00000254181 DNAH10Q8IVF4 4471 aa3.6□□□□□ -1.83
USP29-201ENST00000254181 FRAS1Q86XX4 4008 aa3.56□□□□□ -1.84
USP29-201ENST00000254181 TNP1P09430 55 aa3.55□□□□□ -1.84
USP29-201ENST00000254181 DYNC2H1Q8NCM8 4307 aaKnown RBP3.51□□□□□ -1.85
USP29-201ENST00000254181 DNAH8Q96JB1 4490 aa3.49□□□□□ -1.85
USP29-201ENST00000254181 KMT2AQ03164 3969 aa3.48□□□□□ -1.85
USP29-201ENST00000254181 HECTD4Q9Y4D8 3996 aa3.47□□□□□ -1.85
USP29-201ENST00000254181 PRKDCP78527 4128 aaKnown RBP3.47□□□□□ -1.85
USP29-201ENST00000254181 VPS13DQ5THJ4 4388 aa3.47□□□□□ -1.85
USP29-201ENST00000254181 DNAH17Q9UFH2 4485 aa3.47□□□□□ -1.85
USP29-201ENST00000254181 DNAH6Q9C0G6 4158 aa3.45□□□□□ -1.86
USP29-201ENST00000254181 HUWE1Q7Z6Z7 4374 aaKnown RBP3.41□□□□□ -1.86
USP29-201ENST00000254181 DNAH2Q9P225 4427 aa3.4□□□□□ -1.86
USP29-201ENST00000254181 FAT2Q9NYQ8 4349 aa3.37□□□□□ -1.87
USP29-201ENST00000254181 Q5VSD8 79 aa3.37□□□□□ -1.87
USP29-201ENST00000254181 SPRR5A0A1B0GTR4 108 aa3.35□□□□□ -1.87
USP29-201ENST00000254181 PLECQ15149 4684 aaKnown RBP3.33□□□□□ -1.88
USP29-201ENST00000254181 STARD9Q9P2P6 4700 aa3.32□□□□□ -1.88
USP29-201ENST00000254181 PKD1P98161 4303 aa3.3□□□□□ -1.88
USP29-201ENST00000254181 VPS13BQ7Z7G8 4022 aa3.29□□□□□ -1.88
USP29-201ENST00000254181 KRTAP21-3Q3LHN1 58 aa3.27□□□□□ -1.89
USP29-201ENST00000254181 DNAH11Q96DT5 4516 aa3.25□□□□□ -1.89
USP29-201ENST00000254181 DNAH5Q8TE73 4624 aa3.24□□□□□ -1.89
USP29-201ENST00000254181 PKHD1P08F94 4074 aa3.23□□□□□ -1.89
USP29-201ENST00000254181 HYDINQ4G0P3 5121 aa3.23□□□□□ -1.89
USP29-201ENST00000254181 A0A1B0GVY2 172 aa3.18□□□□□ -1.9
USP29-201ENST00000254181 LRP1BQ9NZR2 4599 aa3.18□□□□□ -1.9
USP29-201ENST00000254181 DNHD1Q96M86 4753 aa3.17□□□□□ -1.9
USP29-201ENST00000254181 APOBP04114 4563 aaKnown RBP3.15□□□□□ -1.9
USP29-201ENST00000254181 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
USP29-201ENST00000254181 SACSQ9NZJ4 4579 aa3.13□□□□□ -1.91
USP29-201ENST00000254181 PKHD1L1Q86WI1 4243 aa3.13□□□□□ -1.91
USP29-201ENST00000254181 LCE5AQ5TCM9 118 aa3.09□□□□□ -1.91
USP29-201ENST00000254181 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.92
USP29-201ENST00000254181 TNXBP22105 4242 aa3.05□□□□□ -1.92
USP29-201ENST00000254181 MYCBP2O75592 4640 aa3.04□□□□□ -1.92
USP29-201ENST00000254181 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
USP29-201ENST00000254181 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
USP29-201ENST00000254181 KRTAP10-4P60372 401 aaPredicted RBP2.99□□□□□ -1.93
USP29-201ENST00000254181 HSPG2P98160 4391 aa2.99□□□□□ -1.93
USP29-201ENST00000254181 FAT3Q8TDW7 4589 aa2.98□□□□□ -1.93
USP29-201ENST00000254181 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
USP29-201ENST00000254181 KRTAP17-1Q9BYP8 105 aa2.98□□□□□ -1.93
USP29-201ENST00000254181 LPAP08519 4548 aa2.98□□□□□ -1.93
USP29-201ENST00000254181 LRP1Q07954 4544 aaKnown RBP2.98□□□□□ -1.93
USP29-201ENST00000254181 M0R2T5 61 aa2.97□□□□□ -1.93
USP29-201ENST00000254181 FAT1Q14517 4588 aa2.97□□□□□ -1.93
USP29-201ENST00000254181 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
USP29-201ENST00000254181 LCE1AQ5T7P2 110 aa2.92□□□□□ -1.94
USP29-201ENST00000254181 DYNC1H1Q14204 4646 aaKnown RBP2.92□□□□□ -1.94
USP29-201ENST00000254181 KRTAP9-4Q9BYQ2 154 aa2.91□□□□□ -1.94
USP29-201ENST00000254181 KRTAP8-1Q8IUC2 63 aa2.91□□□□□ -1.94
USP29-201ENST00000254181 KMT2CQ8NEZ4 4911 aaKnown RBP2.9□□□□□ -1.95
USP29-201ENST00000254181 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.95
USP29-201ENST00000254181 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
USP29-201ENST00000254181 KRTAP19-4Q3LI73 84 aa2.85□□□□□ -1.95
USP29-201ENST00000254181 KRTAP9-6A0A140TA67 174 aa2.84□□□□□ -1.96
USP29-201ENST00000254181 RYR1P21817 5038 aa2.83□□□□□ -1.96
USP29-201ENST00000254181 LRP2P98164 4655 aa2.82□□□□□ -1.96
USP29-201ENST00000254181 RYR3Q15413 4870 aa2.8□□□□□ -1.96
USP29-201ENST00000254181 MT1HL1P0DM35 61 aa2.8□□□□□ -1.96
USP29-201ENST00000254181 RYR2Q92736 4967 aa2.79□□□□□ -1.96
USP29-201ENST00000254181 ABCA13Q86UQ4 5058 aa2.78□□□□□ -1.96
USP29-201ENST00000254181 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.97
USP29-201ENST00000254181 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
USP29-201ENST00000254181 KRTAP4-1Q9BYQ7 146 aa2.77□□□□□ -1.97
USP29-201ENST00000254181 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
USP29-201ENST00000254181 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
USP29-201ENST00000254181 MUC2Q02817 5179 aa2.71□□□□□ -1.98
USP29-201ENST00000254181 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
USP29-201ENST00000254181 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
USP29-201ENST00000254181 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
USP29-201ENST00000254181 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
USP29-201ENST00000254181 MUC17Q685J3 4493 aa2.68□□□□□ -1.98
USP29-201ENST00000254181 EPPK1P58107 5090 aaKnown RBP2.67□□□□□ -1.98
USP29-201ENST00000254181 LOC100996750A0A140TA64 210 aa2.66□□□□□ -1.98
USP29-201ENST00000254181 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
USP29-201ENST00000254181 FLGP20930 4061 aaPredicted RBP2.66□□□□□ -1.98
USP29-201ENST00000254181 KRTAP19-5Q3LI72 72 aa2.65□□□□□ -1.98
USP29-201ENST00000254181 KRTAP9-7A8MTY7 169 aa2.65□□□□□ -1.99
USP29-201ENST00000254181 KRTAP19-1Q8IUB9 90 aa2.65□□□□□ -1.99
USP29-201ENST00000254181 MT3P25713 68 aa2.64□□□□□ -1.99
USP29-201ENST00000254181 KRTAP2-3P0C7H8 128 aa2.62□□□□□ -1.99
USP29-201ENST00000254181 KRTAP2-4Q9BYR9 128 aa2.62□□□□□ -1.99
USP29-201ENST00000254181 KRTAP2-1Q9BYU5 128 aa2.62□□□□□ -1.99
USP29-201ENST00000254181 KRTAP10-7P60409 375 aaPredicted RBP2.62□□□□□ -1.99
USP29-201ENST00000254181 CRCT1Q9UGL9 99 aa2.61□□□□□ -1.99
USP29-201ENST00000254181 KIAA1109Q2LD37 5005 aa2.6□□□□□ -1.99
USP29-201ENST00000254181 PCLOQ9Y6V0 5065 aa2.6□□□□□ -1.99
USP29-201ENST00000254181 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
USP29-201ENST00000254181 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
USP29-201ENST00000254181 MT1XP80297 61 aa2.55□□□□□ -2
USP29-201ENST00000254181 KRTAP9-3Q9BYQ3 159 aa2.54□□□□□ -2
USP29-201ENST00000254181 KRTAP4-7Q9BYR0 210 aa2.54□□□□□ -2
USP29-201ENST00000254181 KRTAP19-2Q3LHN2 52 aa2.53□□□□□ -2.01
USP29-201ENST00000254181 KRTAP9-2Q9BYQ4 174 aa2.53□□□□□ -2.01
USP29-201ENST00000254181 FAT4Q6V0I7 4981 aa2.51□□□□□ -2.01
USP29-201ENST00000254181 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
USP29-201ENST00000254181 PRM1P04553 51 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms