RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
ZKSCAN3-201ENST00000252211 CSMD3Q7Z407 3707 aa5.43□□□□□ -1.54
ZKSCAN3-201ENST00000252211 DNAH10Q8IVF4 4471 aa5.43□□□□□ -1.54
ZKSCAN3-201ENST00000252211 DNAH1Q9P2D7 4330 aa5.43□□□□□ -1.54
ZKSCAN3-201ENST00000252211 DYNC1H1Q14204 4646 aaKnown RBP5.39□□□□□ -1.55
ZKSCAN3-201ENST00000252211 VPS13DQ5THJ4 4388 aa5.37□□□□□ -1.55
ZKSCAN3-201ENST00000252211 RYR1P21817 5038 aa5.36□□□□□ -1.55
ZKSCAN3-201ENST00000252211 KRTAP10-12P60413 245 aa5.34□□□□□ -1.55
ZKSCAN3-201ENST00000252211 FAT1Q14517 4588 aa5.32□□□□□ -1.56
ZKSCAN3-201ENST00000252211 LRP1BQ9NZR2 4599 aa5.31□□□□□ -1.56
ZKSCAN3-201ENST00000252211 KRTAP4-1Q9BYQ7 146 aa5.29□□□□□ -1.56
ZKSCAN3-201ENST00000252211 STARD9Q9P2P6 4700 aa5.29□□□□□ -1.56
ZKSCAN3-201ENST00000252211 DNAH17Q9UFH2 4485 aa5.28□□□□□ -1.56
ZKSCAN3-201ENST00000252211 PRKDCP78527 4128 aaKnown RBP5.27□□□□□ -1.57
ZKSCAN3-201ENST00000252211 LORP23490 312 aaPredicted RBP5.23□□□□□ -1.57
ZKSCAN3-201ENST00000252211 KIAA1109Q2LD37 5005 aa5.23□□□□□ -1.57
ZKSCAN3-201ENST00000252211 MT1HP80294 61 aa5.22□□□□□ -1.57
ZKSCAN3-201ENST00000252211 ANK2Q01484 3957 aa5.18□□□□□ -1.58
ZKSCAN3-201ENST00000252211 SACSQ9NZJ4 4579 aa5.18□□□□□ -1.58
ZKSCAN3-201ENST00000252211 FAT2Q9NYQ8 4349 aa5.16□□□□□ -1.58
ZKSCAN3-201ENST00000252211 RYR3Q15413 4870 aa5.15□□□□□ -1.59
ZKSCAN3-201ENST00000252211 KRTAP12-3P60328 96 aa5.15□□□□□ -1.59
ZKSCAN3-201ENST00000252211 DNAH3Q8TD57 4116 aa5.15□□□□□ -1.59
ZKSCAN3-201ENST00000252211 DNAH2Q9P225 4427 aa5.14□□□□□ -1.59
ZKSCAN3-201ENST00000252211 CMYA5Q8N3K9 4069 aa5.13□□□□□ -1.59
ZKSCAN3-201ENST00000252211 DYNC2H1Q8NCM8 4307 aaKnown RBP5.13□□□□□ -1.59
ZKSCAN3-201ENST00000252211 MT2AP02795 61 aa5.12□□□□□ -1.59
ZKSCAN3-201ENST00000252211 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
ZKSCAN3-201ENST00000252211 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
ZKSCAN3-201ENST00000252211 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
ZKSCAN3-201ENST00000252211 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
ZKSCAN3-201ENST00000252211 KRTAP17-1Q9BYP8 105 aa5.05□□□□□ -1.6
ZKSCAN3-201ENST00000252211 DNAH8Q96JB1 4490 aa5.05□□□□□ -1.6
ZKSCAN3-201ENST00000252211 SPRR2GQ9BYE4 73 aa5.02□□□□□ -1.61
ZKSCAN3-201ENST00000252211 MT1FP04733 61 aa5.01□□□□□ -1.61
ZKSCAN3-201ENST00000252211 APOBP04114 4563 aaKnown RBP5.01□□□□□ -1.61
ZKSCAN3-201ENST00000252211 KMT2AQ03164 3969 aa4.99□□□□□ -1.61
ZKSCAN3-201ENST00000252211 INE1O15225 51 aa4.99□□□□□ -1.61
ZKSCAN3-201ENST00000252211 RYR2Q92736 4967 aa4.97□□□□□ -1.61
ZKSCAN3-201ENST00000252211 VPS13BQ7Z7G8 4022 aa4.97□□□□□ -1.61
ZKSCAN3-201ENST00000252211 LYSTQ99698 3801 aa4.96□□□□□ -1.62
ZKSCAN3-201ENST00000252211 HERC2O95714 4834 aa4.96□□□□□ -1.62
ZKSCAN3-201ENST00000252211 BIRC6Q9NR09 4857 aa4.96□□□□□ -1.62
ZKSCAN3-201ENST00000252211 MYCBP2O75592 4640 aa4.92□□□□□ -1.62
ZKSCAN3-201ENST00000252211 LRP1Q07954 4544 aaKnown RBP4.85□□□□□ -1.63
ZKSCAN3-201ENST00000252211 FAT3Q8TDW7 4589 aa4.83□□□□□ -1.64
ZKSCAN3-201ENST00000252211 DNAH6Q9C0G6 4158 aa4.81□□□□□ -1.64
ZKSCAN3-201ENST00000252211 DNAH7Q8WXX0 4024 aa4.8□□□□□ -1.64
ZKSCAN3-201ENST00000252211 SPRR2FQ96RM1 72 aa4.78□□□□□ -1.64
ZKSCAN3-201ENST00000252211 HYDINQ4G0P3 5121 aa4.77□□□□□ -1.65
ZKSCAN3-201ENST00000252211 PCLOQ9Y6V0 5065 aa4.76□□□□□ -1.65
ZKSCAN3-201ENST00000252211 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
ZKSCAN3-201ENST00000252211 HECTD4Q9Y4D8 3996 aa4.72□□□□□ -1.65
ZKSCAN3-201ENST00000252211 KRTAP19-1Q8IUB9 90 aa4.72□□□□□ -1.65
ZKSCAN3-201ENST00000252211 HERC1Q15751 4861 aa4.68□□□□□ -1.66
ZKSCAN3-201ENST00000252211 HSPG2P98160 4391 aa4.68□□□□□ -1.66
ZKSCAN3-201ENST00000252211 LRP2P98164 4655 aa4.67□□□□□ -1.66
ZKSCAN3-201ENST00000252211 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.66
ZKSCAN3-201ENST00000252211 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
ZKSCAN3-201ENST00000252211 LCE2CQ5TA81 110 aa4.65□□□□□ -1.67
ZKSCAN3-201ENST00000252211 KRTAP10-7P60409 375 aaPredicted RBP4.63□□□□□ -1.67
ZKSCAN3-201ENST00000252211 PKD1P98161 4303 aa4.63□□□□□ -1.67
ZKSCAN3-201ENST00000252211 KMT2CQ8NEZ4 4911 aaKnown RBP4.61□□□□□ -1.67
ZKSCAN3-201ENST00000252211 FRAS1Q86XX4 4008 aa4.61□□□□□ -1.67
ZKSCAN3-201ENST00000252211 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
ZKSCAN3-201ENST00000252211 PKHD1P08F94 4074 aa4.58□□□□□ -1.68
ZKSCAN3-201ENST00000252211 MT1BP07438 61 aa4.57□□□□□ -1.68
ZKSCAN3-201ENST00000252211 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
ZKSCAN3-201ENST00000252211 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
ZKSCAN3-201ENST00000252211 MT1XP80297 61 aa4.53□□□□□ -1.68
ZKSCAN3-201ENST00000252211 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
ZKSCAN3-201ENST00000252211 SPRR2EP22531 72 aa4.5□□□□□ -1.69
ZKSCAN3-201ENST00000252211 SPRR2BP35325 72 aa4.5□□□□□ -1.69
ZKSCAN3-201ENST00000252211 SPRR2AP35326 72 aa4.5□□□□□ -1.69
ZKSCAN3-201ENST00000252211 EPPK1P58107 5090 aaKnown RBP4.49□□□□□ -1.69
ZKSCAN3-201ENST00000252211 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
ZKSCAN3-201ENST00000252211 ABCA13Q86UQ4 5058 aa4.46□□□□□ -1.7
ZKSCAN3-201ENST00000252211 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
ZKSCAN3-201ENST00000252211 LPAP08519 4548 aa4.37□□□□□ -1.71
ZKSCAN3-201ENST00000252211 LCE2BO14633 110 aa4.36□□□□□ -1.71
ZKSCAN3-201ENST00000252211 SPRR2DP22532 72 aa4.36□□□□□ -1.71
ZKSCAN3-201ENST00000252211 UBR4Q5T4S7 5183 aa4.35□□□□□ -1.71
ZKSCAN3-201ENST00000252211 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
ZKSCAN3-201ENST00000252211 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
ZKSCAN3-201ENST00000252211 MT1GP13640 62 aa4.31□□□□□ -1.72
ZKSCAN3-201ENST00000252211 MUC17Q685J3 4493 aa4.29□□□□□ -1.72
ZKSCAN3-201ENST00000252211 KRTAP9-2Q9BYQ4 174 aa4.29□□□□□ -1.72
ZKSCAN3-201ENST00000252211 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
ZKSCAN3-201ENST00000252211 LCE2AQ5TA79 106 aaPredicted RBP4.25□□□□□ -1.73
ZKSCAN3-201ENST00000252211 TNXBP22105 4242 aa4.23□□□□□ -1.73
ZKSCAN3-201ENST00000252211 RNF213Q63HN8 5207 aa4.22□□□□□ -1.73
ZKSCAN3-201ENST00000252211 FAT4Q6V0I7 4981 aa4.21□□□□□ -1.74
ZKSCAN3-201ENST00000252211 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
ZKSCAN3-201ENST00000252211 FLGP20930 4061 aaPredicted RBP4.21□□□□□ -1.74
ZKSCAN3-201ENST00000252211 FSIP2Q5CZC0 6907 aa4.2□□□□□ -1.74
ZKSCAN3-201ENST00000252211 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
ZKSCAN3-201ENST00000252211 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
ZKSCAN3-201ENST00000252211 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
ZKSCAN3-201ENST00000252211 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
ZKSCAN3-201ENST00000252211 MT1EP04732 61 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 359.7 ms