RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 LAMA5O15230 3695 aa2.11□□□□□ -2.07
KRR1-201ENST00000229214 DNAH3Q8TD57 4116 aa2.1□□□□□ -2.07
KRR1-201ENST00000229214 KRTAP12-4P60329 112 aa2.09□□□□□ -2.08
KRR1-201ENST00000229214 VPS13BQ7Z7G8 4022 aa2.08□□□□□ -2.08
KRR1-201ENST00000229214 KRTAP10-4P60372 401 aaPredicted RBP2.08□□□□□ -2.08
KRR1-201ENST00000229214 CMYA5Q8N3K9 4069 aa2.08□□□□□ -2.08
KRR1-201ENST00000229214 LYSTQ99698 3801 aa2.05□□□□□ -2.08
KRR1-201ENST00000229214 DNAH7Q8WXX0 4024 aa2.05□□□□□ -2.08
KRR1-201ENST00000229214 CSMD2Q7Z408 3487 aa2.05□□□□□ -2.08
KRR1-201ENST00000229214 LCE3CQ5T5A8 94 aa2.05□□□□□ -2.08
KRR1-201ENST00000229214 CUBNO60494 3623 aa2.04□□□□□ -2.08
KRR1-201ENST00000229214 DNAH1Q9P2D7 4330 aa2.03□□□□□ -2.08
KRR1-201ENST00000229214 VPS13CQ709C8 3753 aa2.03□□□□□ -2.09
KRR1-201ENST00000229214 LCE3AQ5TA76 89 aa2.02□□□□□ -2.09
KRR1-201ENST00000229214 KMT2AQ03164 3969 aa2.01□□□□□ -2.09
KRR1-201ENST00000229214 KRTAP10-5P60370 271 aa2.01□□□□□ -2.09
KRR1-201ENST00000229214 FLGP20930 4061 aaPredicted RBP2□□□□□ -2.09
KRR1-201ENST00000229214 KRTAP19-8Q3LI54 63 aa2□□□□□ -2.09
KRR1-201ENST00000229214 MT1GP13640 62 aa1.99□□□□□ -2.09
KRR1-201ENST00000229214 DNHD1Q96M86 4753 aa1.98□□□□□ -2.09
KRR1-201ENST00000229214 SPRR5A0A1B0GTR4 108 aa1.97□□□□□ -2.09
KRR1-201ENST00000229214 FRAS1Q86XX4 4008 aa1.96□□□□□ -2.1
KRR1-201ENST00000229214 MT1FP04733 61 aa1.96□□□□□ -2.1
KRR1-201ENST00000229214 PCLOQ9Y6V0 5065 aa1.96□□□□□ -2.1
KRR1-201ENST00000229214 ALMS1Q8TCU4 4167 aa1.95□□□□□ -2.1
KRR1-201ENST00000229214 RYR3Q15413 4870 aa1.95□□□□□ -2.1
KRR1-201ENST00000229214 CSMD3Q7Z407 3707 aa1.93□□□□□ -2.1
KRR1-201ENST00000229214 RYR1P21817 5038 aa1.93□□□□□ -2.1
KRR1-201ENST00000229214 MT1LQ93083 61 aa1.92□□□□□ -2.1
KRR1-201ENST00000229214 DNAH6Q9C0G6 4158 aa1.92□□□□□ -2.1
KRR1-201ENST00000229214 HYDINQ4G0P3 5121 aa1.9□□□□□ -2.11
KRR1-201ENST00000229214 HUWE1Q7Z6Z7 4374 aaKnown RBP1.88□□□□□ -2.11
KRR1-201ENST00000229214 LCE2CQ5TA81 110 aa1.88□□□□□ -2.11
KRR1-201ENST00000229214 LCE3EQ5T5B0 92 aa1.88□□□□□ -2.11
KRR1-201ENST00000229214 SPRR2AP35326 72 aa1.88□□□□□ -2.11
KRR1-201ENST00000229214 SPRR2FQ96RM1 72 aa1.87□□□□□ -2.11
KRR1-201ENST00000229214 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
KRR1-201ENST00000229214 FAT3Q8TDW7 4589 aa1.87□□□□□ -2.11
KRR1-201ENST00000229214 SPRR2BP35325 72 aa1.86□□□□□ -2.11
KRR1-201ENST00000229214 MT1HP80294 61 aa1.86□□□□□ -2.11
KRR1-201ENST00000229214 LCE2BO14633 110 aa1.86□□□□□ -2.11
KRR1-201ENST00000229214 DNAH10Q8IVF4 4471 aa1.85□□□□□ -2.11
KRR1-201ENST00000229214 MT2AP02795 61 aa1.85□□□□□ -2.11
KRR1-201ENST00000229214 SVEP1Q4LDE5 3571 aa1.85□□□□□ -2.11
KRR1-201ENST00000229214 LRP1Q07954 4544 aaKnown RBP1.81□□□□□ -2.12
KRR1-201ENST00000229214 DNAH2Q9P225 4427 aa1.81□□□□□ -2.12
KRR1-201ENST00000229214 MT1EP04732 61 aa1.81□□□□□ -2.12
KRR1-201ENST00000229214 LCE1AQ5T7P2 110 aa1.8□□□□□ -2.12
KRR1-201ENST00000229214 HSPG2P98160 4391 aa1.8□□□□□ -2.12
KRR1-201ENST00000229214 KRTAP19-5Q3LI72 72 aa1.8□□□□□ -2.12
KRR1-201ENST00000229214 RYR2Q92736 4967 aa1.78□□□□□ -2.12
KRR1-201ENST00000229214 MT1BP07438 61 aa1.76□□□□□ -2.13
KRR1-201ENST00000229214 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
KRR1-201ENST00000229214 PRKDCP78527 4128 aaKnown RBP1.76□□□□□ -2.13
KRR1-201ENST00000229214 KRTAP19-1Q8IUB9 90 aa1.75□□□□□ -2.13
KRR1-201ENST00000229214 MT1MQ8N339 61 aa1.74□□□□□ -2.13
KRR1-201ENST00000229214 SPRR2DP22532 72 aa1.74□□□□□ -2.13
KRR1-201ENST00000229214 MT1AP04731 61 aa1.73□□□□□ -2.13
KRR1-201ENST00000229214 KMT2CQ8NEZ4 4911 aaKnown RBP1.72□□□□□ -2.13
KRR1-201ENST00000229214 SPRR2EP22531 72 aa1.72□□□□□ -2.13
KRR1-201ENST00000229214 SYNE1Q8NF91 8797 aaKnown RBP1.72□□□□□ -2.13
KRR1-201ENST00000229214 DNAH11Q96DT5 4516 aa1.71□□□□□ -2.14
KRR1-201ENST00000229214 MT1XP80297 61 aa1.71□□□□□ -2.14
KRR1-201ENST00000229214 KRTAP4-5Q9BYR2 181 aa1.69□□□□□ -2.14
KRR1-201ENST00000229214 EPPK1P58107 5090 aaKnown RBP1.68□□□□□ -2.14
KRR1-201ENST00000229214 KIAA1109Q2LD37 5005 aa1.68□□□□□ -2.14
KRR1-201ENST00000229214 KRTAP19-6Q3LI70 58 aa1.68□□□□□ -2.14
KRR1-201ENST00000229214 BIRC6Q9NR09 4857 aa1.66□□□□□ -2.14
KRR1-201ENST00000229214 HERC2O95714 4834 aa1.65□□□□□ -2.14
KRR1-201ENST00000229214 LCE4AQ5TA78 99 aa1.65□□□□□ -2.15
KRR1-201ENST00000229214 FAT2Q9NYQ8 4349 aa1.64□□□□□ -2.15
KRR1-201ENST00000229214 DYNC2H1Q8NCM8 4307 aaKnown RBP1.64□□□□□ -2.15
KRR1-201ENST00000229214 DNAH8Q96JB1 4490 aa1.63□□□□□ -2.15
KRR1-201ENST00000229214 PKHD1P08F94 4074 aa1.62□□□□□ -2.15
KRR1-201ENST00000229214 LCE2DQ5TA82 110 aaPredicted RBP1.62□□□□□ -2.15
KRR1-201ENST00000229214 KRTAP9-8Q9BYQ0 159 aa1.62□□□□□ -2.15
KRR1-201ENST00000229214 LCE3BQ5TA77 95 aa1.61□□□□□ -2.15
KRR1-201ENST00000229214 VPS13DQ5THJ4 4388 aa1.61□□□□□ -2.15
KRR1-201ENST00000229214 HMCN2Q8NDA2 5059 aa1.6□□□□□ -2.15
KRR1-201ENST00000229214 DNAH17Q9UFH2 4485 aa1.59□□□□□ -2.15
KRR1-201ENST00000229214 PKHD1L1Q86WI1 4243 aa1.58□□□□□ -2.16
KRR1-201ENST00000229214 KRTAP9-3Q9BYQ3 159 aa1.58□□□□□ -2.16
KRR1-201ENST00000229214 ABCA13Q86UQ4 5058 aa1.58□□□□□ -2.16
KRR1-201ENST00000229214 UBR4Q5T4S7 5183 aa1.57□□□□□ -2.16
KRR1-201ENST00000229214 PKD1P98161 4303 aa1.57□□□□□ -2.16
KRR1-201ENST00000229214 DNAH5Q8TE73 4624 aa1.55□□□□□ -2.16
KRR1-201ENST00000229214 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
KRR1-201ENST00000229214 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
KRR1-201ENST00000229214 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
KRR1-201ENST00000229214 APOBP04114 4563 aaKnown RBP1.55□□□□□ -2.16
KRR1-201ENST00000229214 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
KRR1-201ENST00000229214 ANK3Q12955 4377 aaKnown RBP1.54□□□□□ -2.16
KRR1-201ENST00000229214 DYNC1H1Q14204 4646 aaKnown RBP1.52□□□□□ -2.17
KRR1-201ENST00000229214 FAT1Q14517 4588 aa1.51□□□□□ -2.17
KRR1-201ENST00000229214 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
KRR1-201ENST00000229214 DNAH9Q9NYC9 4486 aa1.49□□□□□ -2.17
KRR1-201ENST00000229214 MT4P47944 62 aa1.49□□□□□ -2.17
KRR1-201ENST00000229214 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
KRR1-201ENST00000229214 SACSQ9NZJ4 4579 aa1.48□□□□□ -2.17
KRR1-201ENST00000229214 LCE2AQ5TA79 106 aaPredicted RBP1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms