RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 CSMD1Q96PZ7 3565 aa2.87□□□□□ -1.95
RBM28-201ENST00000223073 DNAH10Q8IVF4 4471 aa2.87□□□□□ -1.95
RBM28-201ENST00000223073 HECTD4Q9Y4D8 3996 aa2.87□□□□□ -1.95
RBM28-201ENST00000223073 VPS13CQ709C8 3753 aa2.87□□□□□ -1.95
RBM28-201ENST00000223073 CUBNO60494 3623 aa2.84□□□□□ -1.95
RBM28-201ENST00000223073 LCE3AQ5TA76 89 aa2.84□□□□□ -1.96
RBM28-201ENST00000223073 CSMD3Q7Z407 3707 aa2.83□□□□□ -1.96
RBM28-201ENST00000223073 VPS13BQ7Z7G8 4022 aa2.82□□□□□ -1.96
RBM28-201ENST00000223073 PRKDCP78527 4128 aaKnown RBP2.82□□□□□ -1.96
RBM28-201ENST00000223073 ANK3Q12955 4377 aaKnown RBP2.82□□□□□ -1.96
RBM28-201ENST00000223073 KMT2AQ03164 3969 aa2.81□□□□□ -1.96
RBM28-201ENST00000223073 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
RBM28-201ENST00000223073 SVEP1Q4LDE5 3571 aa2.78□□□□□ -1.96
RBM28-201ENST00000223073 LYSTQ99698 3801 aa2.77□□□□□ -1.97
RBM28-201ENST00000223073 KRTAP10-5P60370 271 aa2.76□□□□□ -1.97
RBM28-201ENST00000223073 CSMD2Q7Z408 3487 aa2.76□□□□□ -1.97
RBM28-201ENST00000223073 MUC3AQ02505 3323 aa2.76□□□□□ -1.97
RBM28-201ENST00000223073 FLGP20930 4061 aaPredicted RBP2.74□□□□□ -1.97
RBM28-201ENST00000223073 DNAH8Q96JB1 4490 aa2.74□□□□□ -1.97
RBM28-201ENST00000223073 DNAH17Q9UFH2 4485 aa2.73□□□□□ -1.97
RBM28-201ENST00000223073 CRCT1Q9UGL9 99 aa2.71□□□□□ -1.98
RBM28-201ENST00000223073 VPS13DQ5THJ4 4388 aa2.71□□□□□ -1.98
RBM28-201ENST00000223073 MT3P25713 68 aa2.7□□□□□ -1.98
RBM28-201ENST00000223073 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
RBM28-201ENST00000223073 MT1HL1P0DM35 61 aa2.68□□□□□ -1.98
RBM28-201ENST00000223073 DNAH9Q9NYC9 4486 aa2.67□□□□□ -1.98
RBM28-201ENST00000223073 KRTAP4-5Q9BYR2 181 aa2.66□□□□□ -1.98
RBM28-201ENST00000223073 KRTAP8-1Q8IUC2 63 aa2.66□□□□□ -1.98
RBM28-201ENST00000223073 KRTAP10-4P60372 401 aaPredicted RBP2.63□□□□□ -1.99
RBM28-201ENST00000223073 SPRR2GQ9BYE4 73 aa2.63□□□□□ -1.99
RBM28-201ENST00000223073 DYNC2H1Q8NCM8 4307 aaKnown RBP2.63□□□□□ -1.99
RBM28-201ENST00000223073 LORP23490 312 aaPredicted RBP2.62□□□□□ -1.99
RBM28-201ENST00000223073 LRP1Q07954 4544 aaKnown RBP2.62□□□□□ -1.99
RBM28-201ENST00000223073 PKHD1P08F94 4074 aa2.61□□□□□ -1.99
RBM28-201ENST00000223073 PLECQ15149 4684 aaKnown RBP2.6□□□□□ -1.99
RBM28-201ENST00000223073 SACSQ9NZJ4 4579 aa2.58□□□□□ -2
RBM28-201ENST00000223073 DYNC1H1Q14204 4646 aaKnown RBP2.56□□□□□ -2
RBM28-201ENST00000223073 KRTAP12-4P60329 112 aa2.55□□□□□ -2
RBM28-201ENST00000223073 DNAH5Q8TE73 4624 aa2.54□□□□□ -2
RBM28-201ENST00000223073 HSPG2P98160 4391 aa2.53□□□□□ -2
RBM28-201ENST00000223073 APOBP04114 4563 aaKnown RBP2.52□□□□□ -2.01
RBM28-201ENST00000223073 FAT2Q9NYQ8 4349 aa2.52□□□□□ -2.01
RBM28-201ENST00000223073 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
RBM28-201ENST00000223073 PKD1P98161 4303 aa2.49□□□□□ -2.01
RBM28-201ENST00000223073 TNXBP22105 4242 aa2.47□□□□□ -2.01
RBM28-201ENST00000223073 FAT3Q8TDW7 4589 aa2.45□□□□□ -2.02
RBM28-201ENST00000223073 MYCBP2O75592 4640 aa2.45□□□□□ -2.02
RBM28-201ENST00000223073 FAT1Q14517 4588 aa2.43□□□□□ -2.02
RBM28-201ENST00000223073 PKHD1L1Q86WI1 4243 aa2.41□□□□□ -2.02
RBM28-201ENST00000223073 MT1HP80294 61 aa2.38□□□□□ -2.03
RBM28-201ENST00000223073 KRTAP10-7P60409 375 aaPredicted RBP2.38□□□□□ -2.03
RBM28-201ENST00000223073 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
RBM28-201ENST00000223073 LRP1BQ9NZR2 4599 aa2.36□□□□□ -2.03
RBM28-201ENST00000223073 SPRR2FQ96RM1 72 aa2.35□□□□□ -2.03
RBM28-201ENST00000223073 KRTAP4-1Q9BYQ7 146 aa2.35□□□□□ -2.03
RBM28-201ENST00000223073 KRTAP19-8Q3LI54 63 aa2.35□□□□□ -2.03
RBM28-201ENST00000223073 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
RBM28-201ENST00000223073 MT2AP02795 61 aa2.31□□□□□ -2.04
RBM28-201ENST00000223073 MT1XP80297 61 aa2.28□□□□□ -2.04
RBM28-201ENST00000223073 PRM1P04553 51 aa2.27□□□□□ -2.05
RBM28-201ENST00000223073 LCE3BQ5TA77 95 aa2.26□□□□□ -2.05
RBM28-201ENST00000223073 LCE2CQ5TA81 110 aa2.26□□□□□ -2.05
RBM28-201ENST00000223073 KRTAP2-3P0C7H8 128 aa2.26□□□□□ -2.05
RBM28-201ENST00000223073 KRTAP2-4Q9BYR9 128 aa2.26□□□□□ -2.05
RBM28-201ENST00000223073 KRTAP2-1Q9BYU5 128 aa2.26□□□□□ -2.05
RBM28-201ENST00000223073 MT1FP04733 61 aa2.26□□□□□ -2.05
RBM28-201ENST00000223073 KRTAP19-1Q8IUB9 90 aa2.25□□□□□ -2.05
RBM28-201ENST00000223073 MT1LQ93083 61 aa2.24□□□□□ -2.05
RBM28-201ENST00000223073 RYR1P21817 5038 aa2.23□□□□□ -2.05
RBM28-201ENST00000223073 SPRR2EP22531 72 aa2.22□□□□□ -2.05
RBM28-201ENST00000223073 SPRR2BP35325 72 aa2.22□□□□□ -2.05
RBM28-201ENST00000223073 SPRR2AP35326 72 aa2.22□□□□□ -2.05
RBM28-201ENST00000223073 MT1GP13640 62 aa2.22□□□□□ -2.05
RBM28-201ENST00000223073 MT1EP04732 61 aa2.2□□□□□ -2.06
RBM28-201ENST00000223073 STARD9Q9P2P6 4700 aa2.19□□□□□ -2.06
RBM28-201ENST00000223073 MT1AP04731 61 aa2.15□□□□□ -2.07
RBM28-201ENST00000223073 LCE2BO14633 110 aa2.15□□□□□ -2.07
RBM28-201ENST00000223073 SPRR2DP22532 72 aa2.15□□□□□ -2.07
RBM28-201ENST00000223073 RYR3Q15413 4870 aa2.11□□□□□ -2.07
RBM28-201ENST00000223073 LRP2P98164 4655 aa2.1□□□□□ -2.07
RBM28-201ENST00000223073 MT1BP07438 61 aa2.1□□□□□ -2.07
RBM28-201ENST00000223073 HYDINQ4G0P3 5121 aa2.09□□□□□ -2.07
RBM28-201ENST00000223073 LCE2AQ5TA79 106 aaPredicted RBP2.08□□□□□ -2.08
RBM28-201ENST00000223073 MUC17Q685J3 4493 aa2.08□□□□□ -2.08
RBM28-201ENST00000223073 DNHD1Q96M86 4753 aa2.06□□□□□ -2.08
RBM28-201ENST00000223073 KMT2CQ8NEZ4 4911 aaKnown RBP2.06□□□□□ -2.08
RBM28-201ENST00000223073 KRTAP17-1Q9BYP8 105 aa2.04□□□□□ -2.08
RBM28-201ENST00000223073 KRTAP19-3Q7Z4W3 81 aa2.04□□□□□ -2.08
RBM28-201ENST00000223073 RYR2Q92736 4967 aa2.04□□□□□ -2.08
RBM28-201ENST00000223073 KRTAP4-8A0A0G2JLE6 195 aa2.03□□□□□ -2.08
RBM28-201ENST00000223073 KRTAP4-8Q9BYQ9 185 aa2.03□□□□□ -2.08
RBM28-201ENST00000223073 KRTAP9-8Q9BYQ0 159 aa2.03□□□□□ -2.08
RBM28-201ENST00000223073 BIRC6Q9NR09 4857 aa2.02□□□□□ -2.09
RBM28-201ENST00000223073 KRTAP9-3Q9BYQ3 159 aa2.02□□□□□ -2.09
RBM28-201ENST00000223073 LCE2DQ5TA82 110 aaPredicted RBP2□□□□□ -2.09
RBM28-201ENST00000223073 MT1MQ8N339 61 aa2□□□□□ -2.09
RBM28-201ENST00000223073 HERC2O95714 4834 aa1.99□□□□□ -2.09
RBM28-201ENST00000223073 HERC1Q15751 4861 aa1.97□□□□□ -2.09
RBM28-201ENST00000223073 PCLOQ9Y6V0 5065 aa1.94□□□□□ -2.1
RBM28-201ENST00000223073 HMCN2Q8NDA2 5059 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms