RNA–Protein interactions for RNA: ENST00000222990.7

SNX8-201, Transcript of sorting nexin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX8, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-201ENST00000222990 DNAH10Q8IVF4 4471 aa9.06□□□□□ -0.96
SNX8-201ENST00000222990 ALMS1Q8TCU4 4167 aa9.06□□□□□ -0.96
SNX8-201ENST00000222990 VPS13DQ5THJ4 4388 aa9.03□□□□□ -0.96
SNX8-201ENST00000222990 KRTAP4-5Q9BYR2 181 aa9.01□□□□□ -0.97
SNX8-201ENST00000222990 DNAH17Q9UFH2 4485 aa8.99□□□□□ -0.97
SNX8-201ENST00000222990 KRTAP15-1Q3LI76 137 aa8.87□□□□□ -0.99
SNX8-201ENST00000222990 STARD9Q9P2P6 4700 aa8.86□□□□□ -0.99
SNX8-201ENST00000222990 DNAH2Q9P225 4427 aa8.76□□□□□ -1.01
SNX8-201ENST00000222990 DYNC1H1Q14204 4646 aaKnown RBP8.75□□□□□ -1.01
SNX8-201ENST00000222990 ANK2Q01484 3957 aa8.73□□□□□ -1.01
SNX8-201ENST00000222990 FAT1Q14517 4588 aa8.72□□□□□ -1.01
SNX8-201ENST00000222990 DNAH8Q96JB1 4490 aa8.72□□□□□ -1.01
SNX8-201ENST00000222990 LRP1BQ9NZR2 4599 aa8.71□□□□□ -1.01
SNX8-201ENST00000222990 LORP23490 312 aaPredicted RBP8.71□□□□□ -1.02
SNX8-201ENST00000222990 DNAH3Q8TD57 4116 aa8.69□□□□□ -1.02
SNX8-201ENST00000222990 PRKDCP78527 4128 aaKnown RBP8.65□□□□□ -1.02
SNX8-201ENST00000222990 DYNC2H1Q8NCM8 4307 aaKnown RBP8.58□□□□□ -1.04
SNX8-201ENST00000222990 SACSQ9NZJ4 4579 aa8.53□□□□□ -1.04
SNX8-201ENST00000222990 KMT2AQ03164 3969 aa8.52□□□□□ -1.05
SNX8-201ENST00000222990 KRTAP23-1A1A580 65 aa8.51□□□□□ -1.05
SNX8-201ENST00000222990 KRTAP10-12P60413 245 aa8.47□□□□□ -1.05
SNX8-201ENST00000222990 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
SNX8-201ENST00000222990 FAT2Q9NYQ8 4349 aa8.44□□□□□ -1.06
SNX8-201ENST00000222990 RYR1P21817 5038 aa8.41□□□□□ -1.06
SNX8-201ENST00000222990 VPS13BQ7Z7G8 4022 aa8.38□□□□□ -1.07
SNX8-201ENST00000222990 LCE3AQ5TA76 89 aa8.33□□□□□ -1.08
SNX8-201ENST00000222990 LYSTQ99698 3801 aa8.32□□□□□ -1.08
SNX8-201ENST00000222990 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
SNX8-201ENST00000222990 CMYA5Q8N3K9 4069 aa8.31□□□□□ -1.08
SNX8-201ENST00000222990 APOBP04114 4563 aaKnown RBP8.29□□□□□ -1.08
SNX8-201ENST00000222990 MYCBP2O75592 4640 aa8.24□□□□□ -1.09
SNX8-201ENST00000222990 KIAA1109Q2LD37 5005 aa8.21□□□□□ -1.09
SNX8-201ENST00000222990 HECTD4Q9Y4D8 3996 aa8.2□□□□□ -1.1
SNX8-201ENST00000222990 FRAS1Q86XX4 4008 aa8.19□□□□□ -1.1
SNX8-201ENST00000222990 INE1O15225 51 aa8.16□□□□□ -1.1
SNX8-201ENST00000222990 DNAH6Q9C0G6 4158 aa8.16□□□□□ -1.1
SNX8-201ENST00000222990 DNAH7Q8WXX0 4024 aa8.1□□□□□ -1.11
SNX8-201ENST00000222990 KRTAP17-1Q9BYP8 105 aa8.08□□□□□ -1.12
SNX8-201ENST00000222990 RYR3Q15413 4870 aa8.08□□□□□ -1.12
SNX8-201ENST00000222990 LRP1Q07954 4544 aaKnown RBP8.07□□□□□ -1.12
SNX8-201ENST00000222990 SPRR2GQ9BYE4 73 aa8.07□□□□□ -1.12
SNX8-201ENST00000222990 MT1HP80294 61 aa8.07□□□□□ -1.12
SNX8-201ENST00000222990 RYR2Q92736 4967 aa8.03□□□□□ -1.12
SNX8-201ENST00000222990 MT2AP02795 61 aa8.01□□□□□ -1.13
SNX8-201ENST00000222990 FAT3Q8TDW7 4589 aa7.92□□□□□ -1.14
SNX8-201ENST00000222990 BIRC6Q9NR09 4857 aa7.91□□□□□ -1.14
SNX8-201ENST00000222990 HYDINQ4G0P3 5121 aa7.89□□□□□ -1.15
SNX8-201ENST00000222990 MT1FP04733 61 aa7.88□□□□□ -1.15
SNX8-201ENST00000222990 KMT2CQ8NEZ4 4911 aaKnown RBP7.87□□□□□ -1.15
SNX8-201ENST00000222990 CRCT1Q9UGL9 99 aa7.8□□□□□ -1.16
SNX8-201ENST00000222990 PKHD1P08F94 4074 aa7.76□□□□□ -1.17
SNX8-201ENST00000222990 HERC2O95714 4834 aa7.75□□□□□ -1.17
SNX8-201ENST00000222990 LRP2P98164 4655 aa7.71□□□□□ -1.17
SNX8-201ENST00000222990 KRTAP19-1Q8IUB9 90 aa7.69□□□□□ -1.18
SNX8-201ENST00000222990 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
SNX8-201ENST00000222990 PKD1P98161 4303 aa7.62□□□□□ -1.19
SNX8-201ENST00000222990 HSPG2P98160 4391 aa7.62□□□□□ -1.19
SNX8-201ENST00000222990 KRTAP19-8Q3LI54 63 aa7.57□□□□□ -1.2
SNX8-201ENST00000222990 EPPK1P58107 5090 aaKnown RBP7.54□□□□□ -1.2
SNX8-201ENST00000222990 KRTAP19-5Q3LI72 72 aa7.51□□□□□ -1.21
SNX8-201ENST00000222990 LCE2CQ5TA81 110 aa7.4□□□□□ -1.22
SNX8-201ENST00000222990 LCE3CQ5T5A8 94 aa7.4□□□□□ -1.22
SNX8-201ENST00000222990 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
SNX8-201ENST00000222990 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
SNX8-201ENST00000222990 MT1XP80297 61 aa7.37□□□□□ -1.23
SNX8-201ENST00000222990 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
SNX8-201ENST00000222990 PKHD1L1Q86WI1 4243 aa7.35□□□□□ -1.23
SNX8-201ENST00000222990 MT1BP07438 61 aa7.35□□□□□ -1.23
SNX8-201ENST00000222990 LPAP08519 4548 aa7.33□□□□□ -1.24
SNX8-201ENST00000222990 TNXBP22105 4242 aa7.29□□□□□ -1.24
SNX8-201ENST00000222990 KRTAP19-2Q3LHN2 52 aa7.29□□□□□ -1.24
SNX8-201ENST00000222990 ABCA13Q86UQ4 5058 aa7.28□□□□□ -1.24
SNX8-201ENST00000222990 HERC1Q15751 4861 aa7.26□□□□□ -1.25
SNX8-201ENST00000222990 KRTAP19-4Q3LI73 84 aa7.24□□□□□ -1.25
SNX8-201ENST00000222990 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
SNX8-201ENST00000222990 PCLOQ9Y6V0 5065 aa7.2□□□□□ -1.26
SNX8-201ENST00000222990 MUC17Q685J3 4493 aa7.16□□□□□ -1.26
SNX8-201ENST00000222990 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.27
SNX8-201ENST00000222990 SPRR2FQ96RM1 72 aa7.08□□□□□ -1.28
SNX8-201ENST00000222990 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
SNX8-201ENST00000222990 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
SNX8-201ENST00000222990 KRTAP4-8Q9BYQ9 185 aa6.97□□□□□ -1.29
SNX8-201ENST00000222990 LCE2BO14633 110 aa6.82□□□□□ -1.32
SNX8-201ENST00000222990 MT1GP13640 62 aa6.72□□□□□ -1.33
SNX8-201ENST00000222990 HMCN2Q8NDA2 5059 aa6.69□□□□□ -1.34
SNX8-201ENST00000222990 RNF213Q63HN8 5207 aa6.67□□□□□ -1.34
SNX8-201ENST00000222990 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.34
SNX8-201ENST00000222990 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
SNX8-201ENST00000222990 MT1LQ93083 61 aa6.6□□□□□ -1.35
SNX8-201ENST00000222990 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
SNX8-201ENST00000222990 LCE3BQ5TA77 95 aa6.59□□□□□ -1.35
SNX8-201ENST00000222990 MT1EP04732 61 aa6.56□□□□□ -1.36
SNX8-201ENST00000222990 KRTAP12-4P60329 112 aa6.56□□□□□ -1.36
SNX8-201ENST00000222990 SPRR2EP22531 72 aa6.51□□□□□ -1.37
SNX8-201ENST00000222990 SPRR2BP35325 72 aa6.51□□□□□ -1.37
SNX8-201ENST00000222990 SPRR2AP35326 72 aa6.51□□□□□ -1.37
SNX8-201ENST00000222990 KRTAP19-3Q7Z4W3 81 aa6.5□□□□□ -1.37
SNX8-201ENST00000222990 LCE2AQ5TA79 106 aaPredicted RBP6.48□□□□□ -1.37
SNX8-201ENST00000222990 MUC2Q02817 5179 aa6.43□□□□□ -1.38
SNX8-201ENST00000222990 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms