RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 PRKDCP78527 4128 aaKnown RBP6.68□□□□□ -1.34
NDFIP2-201ENST00000218652 DNAH7Q8WXX0 4024 aa6.65□□□□□ -1.34
NDFIP2-201ENST00000218652 INE1O15225 51 aa6.64□□□□□ -1.35
NDFIP2-201ENST00000218652 KRTAP10-12P60413 245 aa6.64□□□□□ -1.35
NDFIP2-201ENST00000218652 PLECQ15149 4684 aaKnown RBP6.61□□□□□ -1.35
NDFIP2-201ENST00000218652 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
NDFIP2-201ENST00000218652 ALMS1Q8TCU4 4167 aa6.6□□□□□ -1.35
NDFIP2-201ENST00000218652 STARD9Q9P2P6 4700 aa6.56□□□□□ -1.36
NDFIP2-201ENST00000218652 KMT2AQ03164 3969 aa6.55□□□□□ -1.36
NDFIP2-201ENST00000218652 DNAH3Q8TD57 4116 aa6.53□□□□□ -1.36
NDFIP2-201ENST00000218652 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
NDFIP2-201ENST00000218652 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
NDFIP2-201ENST00000218652 KRTAP10-4P60372 401 aaPredicted RBP6.45□□□□□ -1.38
NDFIP2-201ENST00000218652 LORP23490 312 aaPredicted RBP6.43□□□□□ -1.38
NDFIP2-201ENST00000218652 LCE3AQ5TA76 89 aa6.42□□□□□ -1.38
NDFIP2-201ENST00000218652 DNAH1Q9P2D7 4330 aa6.41□□□□□ -1.38
NDFIP2-201ENST00000218652 DNAH8Q96JB1 4490 aa6.36□□□□□ -1.39
NDFIP2-201ENST00000218652 DNAH11Q96DT5 4516 aa6.34□□□□□ -1.39
NDFIP2-201ENST00000218652 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
NDFIP2-201ENST00000218652 FRAS1Q86XX4 4008 aa6.33□□□□□ -1.4
NDFIP2-201ENST00000218652 DNAH6Q9C0G6 4158 aa6.31□□□□□ -1.4
NDFIP2-201ENST00000218652 HYDINQ4G0P3 5121 aa6.29□□□□□ -1.4
NDFIP2-201ENST00000218652 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
NDFIP2-201ENST00000218652 DNAH2Q9P225 4427 aa6.28□□□□□ -1.4
NDFIP2-201ENST00000218652 FAT1Q14517 4588 aa6.26□□□□□ -1.41
NDFIP2-201ENST00000218652 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
NDFIP2-201ENST00000218652 LRP1BQ9NZR2 4599 aa6.2□□□□□ -1.42
NDFIP2-201ENST00000218652 DNAH17Q9UFH2 4485 aa6.19□□□□□ -1.42
NDFIP2-201ENST00000218652 HECTD4Q9Y4D8 3996 aa6.19□□□□□ -1.42
NDFIP2-201ENST00000218652 PKHD1P08F94 4074 aa6.19□□□□□ -1.42
NDFIP2-201ENST00000218652 KMT2CQ8NEZ4 4911 aaKnown RBP6.13□□□□□ -1.43
NDFIP2-201ENST00000218652 DYNC2H1Q8NCM8 4307 aaKnown RBP6.11□□□□□ -1.43
NDFIP2-201ENST00000218652 DNAH5Q8TE73 4624 aa6.08□□□□□ -1.44
NDFIP2-201ENST00000218652 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
NDFIP2-201ENST00000218652 FAT2Q9NYQ8 4349 aa6.05□□□□□ -1.44
NDFIP2-201ENST00000218652 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
NDFIP2-201ENST00000218652 SACSQ9NZJ4 4579 aa6□□□□□ -1.45
NDFIP2-201ENST00000218652 KRTAP4-1Q9BYQ7 146 aa5.98□□□□□ -1.45
NDFIP2-201ENST00000218652 DYNC1H1Q14204 4646 aaKnown RBP5.97□□□□□ -1.45
NDFIP2-201ENST00000218652 KIAA1109Q2LD37 5005 aa5.93□□□□□ -1.46
NDFIP2-201ENST00000218652 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
NDFIP2-201ENST00000218652 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
NDFIP2-201ENST00000218652 PKD1P98161 4303 aa5.92□□□□□ -1.46
NDFIP2-201ENST00000218652 APOBP04114 4563 aaKnown RBP5.88□□□□□ -1.47
NDFIP2-201ENST00000218652 RYR1P21817 5038 aa5.87□□□□□ -1.47
NDFIP2-201ENST00000218652 FAT3Q8TDW7 4589 aa5.86□□□□□ -1.47
NDFIP2-201ENST00000218652 RYR3Q15413 4870 aa5.83□□□□□ -1.48
NDFIP2-201ENST00000218652 MT2AP02795 61 aa5.83□□□□□ -1.48
NDFIP2-201ENST00000218652 RYR2Q92736 4967 aa5.81□□□□□ -1.48
NDFIP2-201ENST00000218652 MT1HP80294 61 aa5.81□□□□□ -1.48
NDFIP2-201ENST00000218652 SPRR2GQ9BYE4 73 aa5.79□□□□□ -1.48
NDFIP2-201ENST00000218652 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
NDFIP2-201ENST00000218652 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
NDFIP2-201ENST00000218652 MT1FP04733 61 aa5.71□□□□□ -1.5
NDFIP2-201ENST00000218652 EPPK1P58107 5090 aaKnown RBP5.7□□□□□ -1.5
NDFIP2-201ENST00000218652 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
NDFIP2-201ENST00000218652 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.51
NDFIP2-201ENST00000218652 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
NDFIP2-201ENST00000218652 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
NDFIP2-201ENST00000218652 HSPG2P98160 4391 aa5.61□□□□□ -1.51
NDFIP2-201ENST00000218652 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
NDFIP2-201ENST00000218652 LRP2P98164 4655 aa5.56□□□□□ -1.52
NDFIP2-201ENST00000218652 PKHD1L1Q86WI1 4243 aa5.54□□□□□ -1.52
NDFIP2-201ENST00000218652 ABCA13Q86UQ4 5058 aa5.51□□□□□ -1.53
NDFIP2-201ENST00000218652 LPAP08519 4548 aa5.5□□□□□ -1.53
NDFIP2-201ENST00000218652 MUC2Q02817 5179 aa5.44□□□□□ -1.54
NDFIP2-201ENST00000218652 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
NDFIP2-201ENST00000218652 HERC2O95714 4834 aa5.43□□□□□ -1.54
NDFIP2-201ENST00000218652 TNXBP22105 4242 aa5.38□□□□□ -1.55
NDFIP2-201ENST00000218652 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
NDFIP2-201ENST00000218652 HERC1Q15751 4861 aa5.33□□□□□ -1.56
NDFIP2-201ENST00000218652 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
NDFIP2-201ENST00000218652 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
NDFIP2-201ENST00000218652 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
NDFIP2-201ENST00000218652 MT1XP80297 61 aa5.26□□□□□ -1.57
NDFIP2-201ENST00000218652 RNF213Q63HN8 5207 aa5.25□□□□□ -1.57
NDFIP2-201ENST00000218652 MT1GP13640 62 aa5.24□□□□□ -1.57
NDFIP2-201ENST00000218652 PCLOQ9Y6V0 5065 aa5.23□□□□□ -1.57
NDFIP2-201ENST00000218652 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
NDFIP2-201ENST00000218652 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
NDFIP2-201ENST00000218652 MT1BP07438 61 aa5.19□□□□□ -1.58
NDFIP2-201ENST00000218652 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
NDFIP2-201ENST00000218652 SPRR2EP22531 72 aa5.15□□□□□ -1.58
NDFIP2-201ENST00000218652 SPRR2BP35325 72 aa5.15□□□□□ -1.58
NDFIP2-201ENST00000218652 SPRR2AP35326 72 aa5.15□□□□□ -1.58
NDFIP2-201ENST00000218652 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
NDFIP2-201ENST00000218652 BIRC6Q9NR09 4857 aa5.1□□□□□ -1.59
NDFIP2-201ENST00000218652 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
NDFIP2-201ENST00000218652 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
NDFIP2-201ENST00000218652 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
NDFIP2-201ENST00000218652 LCE2BO14633 110 aa5□□□□□ -1.61
NDFIP2-201ENST00000218652 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
NDFIP2-201ENST00000218652 KRTAP19-2Q3LHN2 52 aa4.97□□□□□ -1.61
NDFIP2-201ENST00000218652 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
NDFIP2-201ENST00000218652 SPRR2DP22532 72 aa4.96□□□□□ -1.61
NDFIP2-201ENST00000218652 KRTAP9-3Q9BYQ3 159 aa4.96□□□□□ -1.62
NDFIP2-201ENST00000218652 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
NDFIP2-201ENST00000218652 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
NDFIP2-201ENST00000218652 MUC17Q685J3 4493 aa4.9□□□□□ -1.63
NDFIP2-201ENST00000218652 HMCN2Q8NDA2 5059 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms