RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 HTN1P15515 57 aa-0.01□□□□□ -2.41
CDKN3-201ENST00000216414 MT4P47944 62 aa-0.01□□□□□ -2.41
CDKN3-201ENST00000216414 TFF3Q07654 80 aa-0.01□□□□□ -2.41
CDKN3-201ENST00000216414 DEFB133Q30KQ1 61 aa-0.01□□□□□ -2.41
CDKN3-201ENST00000216414 FAT2Q9NYQ8 4349 aa-0.01□□□□□ -2.41
CDKN3-201ENST00000216414 ITPR2Q14571 2701 aa-0.01□□□□□ -2.41
CDKN3-201ENST00000216414 MACF1Q9UPN3 7388 aaKnown RBP-0.02□□□□□ -2.41
CDKN3-201ENST00000216414 FLGP20930 4061 aaPredicted RBP-0.02□□□□□ -2.41
CDKN3-201ENST00000216414 LRP2P98164 4655 aa-0.02□□□□□ -2.41
CDKN3-201ENST00000216414 TTTY10Q9BZA0 68 aa-0.02□□□□□ -2.41
CDKN3-201ENST00000216414 TNXBP22105 4242 aa-0.02□□□□□ -2.41
CDKN3-201ENST00000216414 PRKDCP78527 4128 aaKnown RBP-0.02□□□□□ -2.41
CDKN3-201ENST00000216414 AKAP9Q99996 3911 aa-0.02□□□□□ -2.41
CDKN3-201ENST00000216414 CFAP46Q8IYW2 2715 aa-0.02□□□□□ -2.41
CDKN3-201ENST00000216414 IQGAP2Q13576 1575 aa-0.02□□□□□ -2.41
CDKN3-201ENST00000216414 SAMD9LQ8IVG5 1584 aa-0.02□□□□□ -2.41
CDKN3-201ENST00000216414 SSPOA2VEC9 5147 aa-0.02□□□□□ -2.41
CDKN3-201ENST00000216414 TEX15Q9BXT5 2789 aa-0.03□□□□□ -2.41
CDKN3-201ENST00000216414 SVEP1Q4LDE5 3571 aa-0.03□□□□□ -2.41
CDKN3-201ENST00000216414 H3BUX3 64 aa-0.03□□□□□ -2.41
CDKN3-201ENST00000216414 MT1EP04732 61 aa-0.03□□□□□ -2.41
CDKN3-201ENST00000216414 KRTAP20-2Q3LI61 65 aa-0.03□□□□□ -2.41
CDKN3-201ENST00000216414 KRTAP8-1Q8IUC2 63 aa-0.03□□□□□ -2.41
CDKN3-201ENST00000216414 PCLOQ9Y6V0 5065 aa-0.03□□□□□ -2.41
CDKN3-201ENST00000216414 A0A0C4DFX4 3053 aa-0.03□□□□□ -2.41
CDKN3-201ENST00000216414 CEP295Q9C0D2 2601 aa-0.03□□□□□ -2.41
CDKN3-201ENST00000216414 PKHD1P08F94 4074 aa-0.03□□□□□ -2.41
CDKN3-201ENST00000216414 HMCN2Q8NDA2 5059 aa-0.04□□□□□ -2.42
CDKN3-201ENST00000216414 IQGAP1P46940 1657 aa-0.04□□□□□ -2.42
CDKN3-201ENST00000216414 DEFB4AO15263 64 aa-0.04□□□□□ -2.42
CDKN3-201ENST00000216414 MT1XP80297 61 aa-0.04□□□□□ -2.42
CDKN3-201ENST00000216414 MUC12Q9UKN1 5478 aa-0.04□□□□□ -2.42
CDKN3-201ENST00000216414 NBPF19A0A087WUL8 3843 aa-0.04□□□□□ -2.42
CDKN3-201ENST00000216414 TLN1Q9Y490 2541 aaKnown RBP-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 COL12A1Q99715 3063 aa-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 NRXN3Q9Y4C0 1643 aa-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 LAMA5O15230 3695 aa-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 TRIOO75962 3097 aa-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 SMR3BP02814 79 aaPredicted RBP-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 MT1LQ93083 61 aa-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 LYSTQ99698 3801 aa-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 Q9Y3F1 56 aa-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 TOP2AP11388 1531 aaKnown RBP-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 LRP1BQ9NZR2 4599 aa-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 MUC2Q02817 5179 aa-0.05□□□□□ -2.42
CDKN3-201ENST00000216414 CHD7Q9P2D1 2997 aa-0.06□□□□□ -2.42
CDKN3-201ENST00000216414 PKD1P98161 4303 aa-0.06□□□□□ -2.42
CDKN3-201ENST00000216414 A0A096LNI7 61 aa-0.06□□□□□ -2.42
CDKN3-201ENST00000216414 DNAH6Q9C0G6 4158 aa-0.06□□□□□ -2.42
CDKN3-201ENST00000216414 LAMA2P24043 3122 aaKnown RBP-0.06□□□□□ -2.42
CDKN3-201ENST00000216414 CUBNO60494 3623 aa-0.06□□□□□ -2.42
CDKN3-201ENST00000216414 C5orf42Q9H799 3197 aa-0.06□□□□□ -2.42
CDKN3-201ENST00000216414 MROH2BQ7Z745 1585 aa-0.06□□□□□ -2.42
CDKN3-201ENST00000216414 DNAH3Q8TD57 4116 aa-0.06□□□□□ -2.42
CDKN3-201ENST00000216414 CELSR3Q9NYQ7 3312 aa-0.07□□□□□ -2.42
CDKN3-201ENST00000216414 ADGRG4Q8IZF6 3080 aa-0.07□□□□□ -2.42
CDKN3-201ENST00000216414 RANBP2P49792 3224 aaKnown RBP-0.07□□□□□ -2.42
CDKN3-201ENST00000216414 PKHD1L1Q86WI1 4243 aa-0.07□□□□□ -2.42
CDKN3-201ENST00000216414 MT2AP02795 61 aa-0.07□□□□□ -2.42
CDKN3-201ENST00000216414 RPL39P62891 51 aaKnown RBP-0.07□□□□□ -2.42
CDKN3-201ENST00000216414 ARHGAP5-AS1Q96IT6 56 aa-0.07□□□□□ -2.42
CDKN3-201ENST00000216414 DNAH1Q9P2D7 4330 aa-0.07□□□□□ -2.42
CDKN3-201ENST00000216414 DNAH9Q9NYC9 4486 aa-0.07□□□□□ -2.42
CDKN3-201ENST00000216414 NFAT5O94916 1531 aa-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 ATP7AQ04656 1500 aa-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 VPS13BQ7Z7G8 4022 aa-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 EYSQ5T1H1 3165 aa-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 CEP250Q9BV73 2442 aa-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 SRCAPQ6ZRS2 3230 aa-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 MT1GP13640 62 aa-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 SNRPGP62308 76 aaKnown RBP-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 KRTAP19-5Q3LI72 72 aa-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 MT1MQ8N339 61 aa-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 DEFB124Q8NES8 71 aa-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 FAT1Q14517 4588 aa-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 ANK3Q12955 4377 aaKnown RBP-0.08□□□□□ -2.42
CDKN3-201ENST00000216414 KMT2CQ8NEZ4 4911 aaKnown RBP-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 RELNP78509 3460 aa-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 CENPEQ02224 2701 aa-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 HERC1Q15751 4861 aa-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 DUOX1Q9NRD9 1551 aa-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 FAT3Q8TDW7 4589 aa-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 K7EIM0 57 aa-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 MT1BP07438 61 aa-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 PRCDQ00LT1 54 aa-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 TMEM167AQ8TBQ9 72 aa-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 RPL39LQ96EH5 51 aaKnown RBP-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 MGAQ8IWI9 3026 aa-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.09□□□□□ -2.42
CDKN3-201ENST00000216414 MUC17Q685J3 4493 aa-0.1□□□□□ -2.42
CDKN3-201ENST00000216414 UBR4Q5T4S7 5183 aa-0.1□□□□□ -2.43
CDKN3-201ENST00000216414 DNAH11Q96DT5 4516 aa-0.1□□□□□ -2.43
CDKN3-201ENST00000216414 LAMA3Q16787 3333 aa-0.1□□□□□ -2.43
CDKN3-201ENST00000216414 NEBP20929 6669 aa-0.1□□□□□ -2.43
CDKN3-201ENST00000216414 VPS13DQ5THJ4 4388 aa-0.1□□□□□ -2.43
CDKN3-201ENST00000216414 STARD9Q9P2P6 4700 aa-0.1□□□□□ -2.43
CDKN3-201ENST00000216414 CRYBG3Q68DQ2 2970 aa-0.1□□□□□ -2.43
CDKN3-201ENST00000216414 ATMQ13315 3056 aa-0.1□□□□□ -2.43
CDKN3-201ENST00000216414 DNAH2Q9P225 4427 aa-0.11□□□□□ -2.43
CDKN3-201ENST00000216414 DNAH8Q96JB1 4490 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms