RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 Q6JHZ5 121 aa4.29□□□□□ -1.72
LINC00339-212ENST00000642072 Q96NJ1 140 aa4.29□□□□□ -1.72
LINC00339-212ENST00000642072 FAM240AA0A1B0GVK7 77 aa4.28□□□□□ -1.72
LINC00339-212ENST00000642072 F8WEM9 126 aa4.28□□□□□ -1.72
LINC00339-212ENST00000642072 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.72
LINC00339-212ENST00000642072 MPLKIPQ8TAP9 179 aa4.28□□□□□ -1.72
LINC00339-212ENST00000642072 SMIM11BQ8TCY0 68 aa4.28□□□□□ -1.72
LINC00339-212ENST00000642072 TRAV13-2A0A0B4J235 113 aa4.27□□□□□ -1.73
LINC00339-212ENST00000642072 KRTAP16-1A8MUX0 517 aa4.27□□□□□ -1.73
LINC00339-212ENST00000642072 TRACP01848 142 aa4.27□□□□□ -1.73
LINC00339-212ENST00000642072 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
LINC00339-212ENST00000642072 LINC00575Q6W349 94 aa4.26□□□□□ -1.73
LINC00339-212ENST00000642072 Q6ZQY7 126 aa4.26□□□□□ -1.73
LINC00339-212ENST00000642072 A0A1B0GV72 72 aa4.24□□□□□ -1.73
LINC00339-212ENST00000642072 ACYP1P07311 99 aa4.24□□□□□ -1.73
LINC00339-212ENST00000642072 KRTAP3-3Q9BYR6 98 aa4.24□□□□□ -1.73
LINC00339-212ENST00000642072 KRTAP3-2Q9BYR7 98 aa4.24□□□□□ -1.73
LINC00339-212ENST00000642072 H0YGX0 51 aa4.23□□□□□ -1.73
LINC00339-212ENST00000642072 MT-ATP8P03928 68 aa4.23□□□□□ -1.73
LINC00339-212ENST00000642072 HRES1P13985 223 aa4.23□□□□□ -1.73
LINC00339-212ENST00000642072 hADV29S1A0JD25 119 aa4.22□□□□□ -1.73
LINC00339-212ENST00000642072 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
LINC00339-212ENST00000642072 A0A1B0GX51 115 aa4.21□□□□□ -1.74
LINC00339-212ENST00000642072 FAM236DA0A1B0GTK5 79 aa4.2□□□□□ -1.74
LINC00339-212ENST00000642072 SNCGO76070 127 aa4.2□□□□□ -1.74
LINC00339-212ENST00000642072 FAM236CP0DP71 79 aa4.2□□□□□ -1.74
LINC00339-212ENST00000642072 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.2□□□□□ -1.74
LINC00339-212ENST00000642072 IMUPQ9GZP8 106 aa4.2□□□□□ -1.74
LINC00339-212ENST00000642072 BAALC-AS2P0C853 105 aa4.19□□□□□ -1.74
LINC00339-212ENST00000642072 DSCR10P59022 87 aa4.19□□□□□ -1.74
LINC00339-212ENST00000642072 NOTCH2NLQ7Z3S9 236 aa4.19□□□□□ -1.74
LINC00339-212ENST00000642072 LINC00846Q9NV44 126 aa4.19□□□□□ -1.74
LINC00339-212ENST00000642072 SS18L2Q9UHA2 77 aa4.19□□□□□ -1.74
LINC00339-212ENST00000642072 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
LINC00339-212ENST00000642072 FAM218AQ96MZ4 157 aa4.18□□□□□ -1.74
LINC00339-212ENST00000642072 DNAL4O96015 105 aa4.17□□□□□ -1.74
LINC00339-212ENST00000642072 LINC00643Q86TS7 51 aa4.17□□□□□ -1.74
LINC00339-212ENST00000642072 RBM12B-AS1Q9P1G2 102 aa4.17□□□□□ -1.74
LINC00339-212ENST00000642072 A0A087WSZ3 146 aa4.16□□□□□ -1.74
LINC00339-212ENST00000642072 H3BQ85 93 aa4.15□□□□□ -1.75
LINC00339-212ENST00000642072 NDUFV3P56181 108 aaKnown RBP4.15□□□□□ -1.75
LINC00339-212ENST00000642072 ANAPC13Q9BS18 74 aa4.14□□□□□ -1.75
LINC00339-212ENST00000642072 ORMDL1Q9P0S3 153 aa4.14□□□□□ -1.75
LINC00339-212ENST00000642072 JMJD7-PLA2G4BH0Y9G9 81 aa4.13□□□□□ -1.75
LINC00339-212ENST00000642072 TMEM256-PLSCR3K7ERE1 68 aa4.13□□□□□ -1.75
LINC00339-212ENST00000642072 LINC00313P59037 77 aa4.13□□□□□ -1.75
LINC00339-212ENST00000642072 A0A1W2PNM2 257 aa4.11□□□□□ -1.75
LINC00339-212ENST00000642072 GHRHP01286 108 aa4.1□□□□□ -1.75
LINC00339-212ENST00000642072 CCKP06307 115 aa4.1□□□□□ -1.75
LINC00339-212ENST00000642072 A8MWP4 228 aa4.09□□□□□ -1.75
LINC00339-212ENST00000642072 HIST1H4AP62805 103 aaKnown RBP4.09□□□□□ -1.75
LINC00339-212ENST00000642072 ATP5EP2Q5VTU8 51 aa4.09□□□□□ -1.75
LINC00339-212ENST00000642072 IGKV4-1P06312 121 aa4.08□□□□□ -1.76
LINC00339-212ENST00000642072 PDE6GP18545 87 aa4.08□□□□□ -1.76
LINC00339-212ENST00000642072 Q8N9P0 234 aaPredicted RBP4.08□□□□□ -1.76
LINC00339-212ENST00000642072 C14orf132Q9NPU4 83 aa4.08□□□□□ -1.76
LINC00339-212ENST00000642072 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
LINC00339-212ENST00000642072 LOC110117498A0A087WWA1 95 aa4.07□□□□□ -1.76
LINC00339-212ENST00000642072 LINC00472Q9H8W2 130 aa4.07□□□□□ -1.76
LINC00339-212ENST00000642072 FAM236AA0A1B0GUQ0 79 aa4.06□□□□□ -1.76
LINC00339-212ENST00000642072 FAM236BA0A1B0GV22 79 aa4.06□□□□□ -1.76
LINC00339-212ENST00000642072 ATOX1O00244 68 aa4.06□□□□□ -1.76
LINC00339-212ENST00000642072 UQCRQO14949 82 aa4.06□□□□□ -1.76
LINC00339-212ENST00000642072 KMT2DO14686 5537 aa4.05□□□□□ -1.76
LINC00339-212ENST00000642072 TRBV7-4A0A0J9YYF1 115 aa4.05□□□□□ -1.76
LINC00339-212ENST00000642072 CCDC179H3BU77 68 aa4.05□□□□□ -1.76
LINC00339-212ENST00000642072 SPINK7P58062 85 aa4.05□□□□□ -1.76
LINC00339-212ENST00000642072 IGHV6-1A0A0B4J1U7 121 aa4.04□□□□□ -1.76
LINC00339-212ENST00000642072 RBM3P98179 157 aaKnown RBP4.04□□□□□ -1.76
LINC00339-212ENST00000642072 DEFB116Q30KQ4 102 aa4.04□□□□□ -1.76
LINC00339-212ENST00000642072 Q6ZQT0 140 aa4.04□□□□□ -1.76
LINC00339-212ENST00000642072 ZCCHC13Q8WW36 166 aaKnown RBP4.04□□□□□ -1.76
LINC00339-212ENST00000642072 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
LINC00339-212ENST00000642072 COX7CP15954 63 aa4.03□□□□□ -1.76
LINC00339-212ENST00000642072 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
LINC00339-212ENST00000642072 UBL5Q9BZL1 73 aa4.03□□□□□ -1.76
LINC00339-212ENST00000642072 A0A1B0GVX0 72 aa4.01□□□□□ -1.77
LINC00339-212ENST00000642072 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
LINC00339-212ENST00000642072 DSCR8Q96T75 97 aa4.01□□□□□ -1.77
LINC00339-212ENST00000642072 IGKV3D-7A0A0C4DH55 119 aa4□□□□□ -1.77
LINC00339-212ENST00000642072 A0A1B0GW54 56 aa4□□□□□ -1.77
LINC00339-212ENST00000642072 C8orf87E5RJ46 101 aa4□□□□□ -1.77
LINC00339-212ENST00000642072 CXCL6P80162 114 aa4□□□□□ -1.77
LINC00339-212ENST00000642072 WFDC13Q8IUB5 93 aa4□□□□□ -1.77
LINC00339-212ENST00000642072 SERP2Q8N6R1 65 aa4□□□□□ -1.77
LINC00339-212ENST00000642072 Q6ZVQ6 151 aa3.97□□□□□ -1.77
LINC00339-212ENST00000642072 SMIM20Q8N5G0 67 aa3.97□□□□□ -1.77
LINC00339-212ENST00000642072 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
LINC00339-212ENST00000642072 A0A087WVE0 104 aa3.95□□□□□ -1.78
LINC00339-212ENST00000642072 TRAV7A0A075B6U4 112 aa3.94□□□□□ -1.78
LINC00339-212ENST00000642072 MT1BP07438 61 aa3.94□□□□□ -1.78
LINC00339-212ENST00000642072 TMEM258P61165 79 aa3.94□□□□□ -1.78
LINC00339-212ENST00000642072 RPS28P62857 69 aaKnown RBP3.94□□□□□ -1.78
LINC00339-212ENST00000642072 A6NN06 94 aa3.93□□□□□ -1.78
LINC00339-212ENST00000642072 H1FX-AS1Q4G0G2 97 aa3.93□□□□□ -1.78
LINC00339-212ENST00000642072 J3KT08 172 aa3.91□□□□□ -1.78
LINC00339-212ENST00000642072 KLKP1Q107X0 134 aa3.9□□□□□ -1.79
LINC00339-212ENST00000642072 NREPQ16612 68 aa3.89□□□□□ -1.79
LINC00339-212ENST00000642072 KRTAP19-8Q3LI54 63 aa3.89□□□□□ -1.79
LINC00339-212ENST00000642072 C8orf17Q9NRJ1 99 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms