RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 LCE2CQ5TA81 110 aa9.98□□□□□ -0.81
VPS72-207ENST00000640458 ACYP1P07311 99 aa9.94□□□□□ -0.82
VPS72-207ENST00000640458 MT1HP80294 61 aa9.92□□□□□ -0.82
VPS72-207ENST00000640458 NREPQ16612 68 aa9.92□□□□□ -0.82
VPS72-207ENST00000640458 C9orf92A6NGG3 77 aa9.91□□□□□ -0.82
VPS72-207ENST00000640458 UBL5Q9BZL1 73 aa9.9□□□□□ -0.82
VPS72-207ENST00000640458 FAM240AA0A1B0GVK7 77 aa9.88□□□□□ -0.83
VPS72-207ENST00000640458 KRTAP9-7A8MTY7 169 aa9.86□□□□□ -0.83
VPS72-207ENST00000640458 KRTAP19-2Q3LHN2 52 aa9.86□□□□□ -0.83
VPS72-207ENST00000640458 K7ERU9 68 aa9.85□□□□□ -0.83
VPS72-207ENST00000640458 J3KT08 172 aa9.84□□□□□ -0.83
VPS72-207ENST00000640458 LORP23490 312 aaPredicted RBP9.84□□□□□ -0.83
VPS72-207ENST00000640458 LINC00846Q9NV44 126 aa9.84□□□□□ -0.83
VPS72-207ENST00000640458 KRTAP10-6P60371 365 aaPredicted RBP9.83□□□□□ -0.84
VPS72-207ENST00000640458 Q6ZVQ6 151 aa9.82□□□□□ -0.84
VPS72-207ENST00000640458 IGKV4-1P06312 121 aa9.81□□□□□ -0.84
VPS72-207ENST00000640458 LINC00472Q9H8W2 130 aa9.81□□□□□ -0.84
VPS72-207ENST00000640458 SIGMAR1Q99720 223 aa9.79□□□□□ -0.84
VPS72-207ENST00000640458 BPY2O14599 106 aa9.78□□□□□ -0.84
VPS72-207ENST00000640458 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
VPS72-207ENST00000640458 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.77□□□□□ -0.85
VPS72-207ENST00000640458 NDUFB1O75438 58 aa9.77□□□□□ -0.85
VPS72-207ENST00000640458 DEFB116Q30KQ4 102 aa9.77□□□□□ -0.85
VPS72-207ENST00000640458 Q96NJ1 140 aa9.77□□□□□ -0.85
VPS72-207ENST00000640458 RPL37P61927 97 aaKnown RBP9.75□□□□□ -0.85
VPS72-207ENST00000640458 M0R2T5 61 aa9.74□□□□□ -0.85
VPS72-207ENST00000640458 ATP5EP2Q5VTU8 51 aa9.7□□□□□ -0.86
VPS72-207ENST00000640458 LINC00643Q86TS7 51 aa9.7□□□□□ -0.86
VPS72-207ENST00000640458 A8MWP4 228 aa9.69□□□□□ -0.86
VPS72-207ENST00000640458 CXCL6P80162 114 aa9.69□□□□□ -0.86
VPS72-207ENST00000640458 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
VPS72-207ENST00000640458 IGHV6-1A0A0B4J1U7 121 aa9.65□□□□□ -0.86
VPS72-207ENST00000640458 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
VPS72-207ENST00000640458 DSCR10P59022 87 aa9.64□□□□□ -0.87
VPS72-207ENST00000640458 LINC00313P59037 77 aa9.63□□□□□ -0.87
VPS72-207ENST00000640458 Q75L30 129 aa9.63□□□□□ -0.87
VPS72-207ENST00000640458 PRR15Q8IV56 129 aa9.63□□□□□ -0.87
VPS72-207ENST00000640458 IGKV3D-7A0A0C4DH55 119 aa9.62□□□□□ -0.87
VPS72-207ENST00000640458 K7EQZ3 153 aa9.61□□□□□ -0.87
VPS72-207ENST00000640458 COX6B2Q6YFQ2 88 aa9.59□□□□□ -0.87
VPS72-207ENST00000640458 ATP11AUNQ6ZP68 121 aa9.57□□□□□ -0.88
VPS72-207ENST00000640458 C20orf166-AS1Q96NR2 134 aa9.57□□□□□ -0.88
VPS72-207ENST00000640458 HIST1H4AP62805 103 aaKnown RBP9.56□□□□□ -0.88
VPS72-207ENST00000640458 Q8N9L7 120 aa9.56□□□□□ -0.88
VPS72-207ENST00000640458 C8orf17Q9NRJ1 99 aa9.56□□□□□ -0.88
VPS72-207ENST00000640458 A8MUU9 505 aa9.55□□□□□ -0.88
VPS72-207ENST00000640458 hDV103S1A0JD37 113 aa9.5□□□□□ -0.89
VPS72-207ENST00000640458 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
VPS72-207ENST00000640458 MMP24-AS1A0A0U1RRL7 71 aa9.49□□□□□ -0.89
VPS72-207ENST00000640458 CASC2Q6XLA1 102 aa9.49□□□□□ -0.89
VPS72-207ENST00000640458 FLGP20930 4061 aaPredicted RBP9.49□□□□□ -0.89
VPS72-207ENST00000640458 KRTAP16-1A8MUX0 517 aa9.48□□□□□ -0.89
VPS72-207ENST00000640458 NOTCH2NLQ7Z3S9 236 aa9.48□□□□□ -0.89
VPS72-207ENST00000640458 TMEM254Q8TBM7 123 aa9.48□□□□□ -0.89
VPS72-207ENST00000640458 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
VPS72-207ENST00000640458 WFDC13Q8IUB5 93 aa9.47□□□□□ -0.89
VPS72-207ENST00000640458 MRPL34Q9BQ48 92 aaKnown RBP9.46□□□□□ -0.9
VPS72-207ENST00000640458 SSPOA2VEC9 5147 aa9.46□□□□□ -0.9
VPS72-207ENST00000640458 MT-ATP8P03928 68 aa9.44□□□□□ -0.9
VPS72-207ENST00000640458 NDUFS5O43920 106 aa9.42□□□□□ -0.9
VPS72-207ENST00000640458 USH2AO75445 5202 aa9.41□□□□□ -0.9
VPS72-207ENST00000640458 A0A087WVE0 104 aa9.4□□□□□ -0.9
VPS72-207ENST00000640458 Q8N9P0 234 aaPredicted RBP9.38□□□□□ -0.91
VPS72-207ENST00000640458 SCGB1A1P11684 91 aa9.35□□□□□ -0.91
VPS72-207ENST00000640458 FCGBPQ9Y6R7 5405 aaPredicted RBP9.34□□□□□ -0.91
VPS72-207ENST00000640458 TP53AIP1Q9HCN2 124 aa9.33□□□□□ -0.92
VPS72-207ENST00000640458 FAM236AA0A1B0GUQ0 79 aa9.27□□□□□ -0.93
VPS72-207ENST00000640458 FAM236BA0A1B0GV22 79 aa9.27□□□□□ -0.93
VPS72-207ENST00000640458 ZCCHC13Q8WW36 166 aaKnown RBP9.27□□□□□ -0.93
VPS72-207ENST00000640458 KRTAP9-8Q9BYQ0 159 aa9.27□□□□□ -0.93
VPS72-207ENST00000640458 KRTAP19-1Q8IUB9 90 aa9.26□□□□□ -0.93
VPS72-207ENST00000640458 SYNE2Q8WXH0 6885 aaKnown RBP9.25□□□□□ -0.93
VPS72-207ENST00000640458 SMIM20Q8N5G0 67 aa9.23□□□□□ -0.93
VPS72-207ENST00000640458 UQCRQO14949 82 aa9.22□□□□□ -0.93
VPS72-207ENST00000640458 MACF1Q9UPN3 7388 aaKnown RBP9.2□□□□□ -0.94
VPS72-207ENST00000640458 ATOX1O00244 68 aa9.2□□□□□ -0.94
VPS72-207ENST00000640458 HRES1P13985 223 aa9.19□□□□□ -0.94
VPS72-207ENST00000640458 MPLKIPQ8TAP9 179 aa9.17□□□□□ -0.94
VPS72-207ENST00000640458 TRAV22A0A0B4J277 110 aa9.16□□□□□ -0.94
VPS72-207ENST00000640458 OCR1Q9BZK8 76 aa9.15□□□□□ -0.94
VPS72-207ENST00000640458 RBM12B-AS1Q9P1G2 102 aa9.14□□□□□ -0.95
VPS72-207ENST00000640458 MP68P56378 58 aa9.13□□□□□ -0.95
VPS72-207ENST00000640458 Q5W150 140 aa9.13□□□□□ -0.95
VPS72-207ENST00000640458 LCE2BO14633 110 aa9.12□□□□□ -0.95
VPS72-207ENST00000640458 SPINK7P58062 85 aa9.12□□□□□ -0.95
VPS72-207ENST00000640458 C5orf47Q569G3 176 aa9.12□□□□□ -0.95
VPS72-207ENST00000640458 TRAV7A0A075B6U4 112 aa9.11□□□□□ -0.95
VPS72-207ENST00000640458 FAM236DA0A1B0GTK5 79 aa9.11□□□□□ -0.95
VPS72-207ENST00000640458 H0Y9P7 68 aa9.11□□□□□ -0.95
VPS72-207ENST00000640458 FAM236CP0DP71 79 aa9.11□□□□□ -0.95
VPS72-207ENST00000640458 MT2AP02795 61 aa9.08□□□□□ -0.96
VPS72-207ENST00000640458 C7orf65Q6ZTY9 151 aa9.08□□□□□ -0.96
VPS72-207ENST00000640458 IGKV2D-30A0A075B6S6 120 aa9.07□□□□□ -0.96
VPS72-207ENST00000640458 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
VPS72-207ENST00000640458 LOC101927531A0A1B0GV80 90 aa9.05□□□□□ -0.96
VPS72-207ENST00000640458 H3BPC8 53 aa9.05□□□□□ -0.96
VPS72-207ENST00000640458 SERP2Q8N6R1 65 aa9.04□□□□□ -0.96
VPS72-207ENST00000640458 MT1FP04733 61 aa9.02□□□□□ -0.97
VPS72-207ENST00000640458 LINC00208Q96KT6 92 aa9.02□□□□□ -0.97
VPS72-207ENST00000640458 C1orf64Q8NEQ6 169 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms