RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 TOGARAM1Q9Y4F4 1720 aa-0.3□□□□□ -2.46
ATM-228ENST00000639240 PKD1L2Q7Z442 2459 aa-0.31□□□□□ -2.46
ATM-228ENST00000639240 TACC2O95359 2948 aa-0.31□□□□□ -2.46
ATM-228ENST00000639240 FAT3Q8TDW7 4589 aa-0.31□□□□□ -2.46
ATM-228ENST00000639240 AKAP9Q99996 3911 aa-0.32□□□□□ -2.46
ATM-228ENST00000639240 CLASP1Q7Z460 1538 aa-0.32□□□□□ -2.46
ATM-228ENST00000639240 LY75O60449 1722 aa-0.32□□□□□ -2.46
ATM-228ENST00000639240 USH2AO75445 5202 aa-0.32□□□□□ -2.46
ATM-228ENST00000639240 DEFB106AQ8N104 65 aa-0.32□□□□□ -2.46
ATM-228ENST00000639240 GNG13Q9P2W3 67 aa-0.32□□□□□ -2.46
ATM-228ENST00000639240 DNAH6Q9C0G6 4158 aa-0.32□□□□□ -2.46
ATM-228ENST00000639240 LAMA5O15230 3695 aa-0.32□□□□□ -2.46
ATM-228ENST00000639240 RYR2Q92736 4967 aa-0.32□□□□□ -2.46
ATM-228ENST00000639240 MTORP42345 2549 aa-0.32□□□□□ -2.46
ATM-228ENST00000639240 PKHD1L1Q86WI1 4243 aa-0.33□□□□□ -2.46
ATM-228ENST00000639240 ABCA6Q8N139 1617 aa-0.33□□□□□ -2.46
ATM-228ENST00000639240 WT1-ASQ06250 92 aa-0.33□□□□□ -2.46
ATM-228ENST00000639240 MINOS1Q5TGZ0 78 aa-0.33□□□□□ -2.46
ATM-228ENST00000639240 ANK3Q12955 4377 aaKnown RBP-0.33□□□□□ -2.46
ATM-228ENST00000639240 RPS27P42677 84 aaKnown RBP-0.34□□□□□ -2.46
ATM-228ENST00000639240 CDC42BPAQ5VT25 1732 aa-0.34□□□□□ -2.46
ATM-228ENST00000639240 RPS27LQ71UM5 84 aaKnown RBP-0.34□□□□□ -2.46
ATM-228ENST00000639240 KALRNO60229 2985 aa-0.34□□□□□ -2.46
ATM-228ENST00000639240 FASNP49327 2511 aaKnown RBP-0.34□□□□□ -2.46
ATM-228ENST00000639240 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.34□□□□□ -2.46
ATM-228ENST00000639240 DNAH9Q9NYC9 4486 aa-0.35□□□□□ -2.47
ATM-228ENST00000639240 LRRK2Q5S007 2527 aa-0.35□□□□□ -2.47
ATM-228ENST00000639240 DNAH3Q8TD57 4116 aa-0.35□□□□□ -2.47
ATM-228ENST00000639240 CROCC2H7BZ55 1655 aa-0.35□□□□□ -2.47
ATM-228ENST00000639240 FAM186AA6NE01 2351 aa-0.35□□□□□ -2.47
ATM-228ENST00000639240 UBR4Q5T4S7 5183 aa-0.35□□□□□ -2.47
ATM-228ENST00000639240 TIAM1Q13009 1591 aa-0.36□□□□□ -2.47
ATM-228ENST00000639240 LAMA1P25391 3075 aa-0.36□□□□□ -2.47
ATM-228ENST00000639240 NBPF19A0A087WUL8 3843 aa-0.36□□□□□ -2.47
ATM-228ENST00000639240 RANBP2P49792 3224 aaKnown RBP-0.36□□□□□ -2.47
ATM-228ENST00000639240 K7EMI3 77 aa-0.36□□□□□ -2.47
ATM-228ENST00000639240 C6orf48Q9UBA6 75 aa-0.36□□□□□ -2.47
ATM-228ENST00000639240 NBEAQ8NFP9 2946 aa-0.37□□□□□ -2.47
ATM-228ENST00000639240 A0A087WWC5 75 aa-0.37□□□□□ -2.47
ATM-228ENST00000639240 KRTAP19-8Q3LI54 63 aa-0.37□□□□□ -2.47
ATM-228ENST00000639240 LINC01549A6NIU2 74 aa-0.38□□□□□ -2.47
ATM-228ENST00000639240 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.38□□□□□ -2.47
ATM-228ENST00000639240 H3BUA1 57 aa-0.39□□□□□ -2.47
ATM-228ENST00000639240 UTP20O75691 2785 aaKnown RBP-0.39□□□□□ -2.47
ATM-228ENST00000639240 KIAA1109Q2LD37 5005 aa-0.39□□□□□ -2.47
ATM-228ENST00000639240 NBEAL2Q6ZNJ1 2754 aa-0.4□□□□□ -2.47
ATM-228ENST00000639240 MYO18BQ8IUG5 2567 aa-0.4□□□□□ -2.47
ATM-228ENST00000639240 VPS13DQ5THJ4 4388 aa-0.4□□□□□ -2.47
ATM-228ENST00000639240 GLI2P10070 1586 aa-0.4□□□□□ -2.47
ATM-228ENST00000639240 ABCA10Q8WWZ4 1543 aa-0.4□□□□□ -2.47
ATM-228ENST00000639240 ABCA13Q86UQ4 5058 aa-0.4□□□□□ -2.47
ATM-228ENST00000639240 IGLV5-48A0A075B6I7 105 aa-0.41□□□□□ -2.48
ATM-228ENST00000639240 NCBP2-AS2Q69YL0 99 aa-0.41□□□□□ -2.48
ATM-228ENST00000639240 ALS2Q96Q42 1657 aa-0.41□□□□□ -2.48
ATM-228ENST00000639240 EPPK1P58107 5090 aaKnown RBP-0.41□□□□□ -2.48
ATM-228ENST00000639240 TRIOO75962 3097 aa-0.41□□□□□ -2.48
ATM-228ENST00000639240 ACACBO00763 2458 aa-0.42□□□□□ -2.48
ATM-228ENST00000639240 FCER1GP30273 86 aa-0.42□□□□□ -2.48
ATM-228ENST00000639240 APOBP04114 4563 aaKnown RBP-0.42□□□□□ -2.48
ATM-228ENST00000639240 ITPR3Q14573 2671 aa-0.42□□□□□ -2.48
ATM-228ENST00000639240 WDR87Q6ZQQ6 2873 aa-0.43□□□□□ -2.48
ATM-228ENST00000639240 ACACAQ13085 2346 aa-0.43□□□□□ -2.48
ATM-228ENST00000639240 HYDINQ4G0P3 5121 aa-0.43□□□□□ -2.48
ATM-228ENST00000639240 MGAM2Q2M2H8 2515 aa-0.43□□□□□ -2.48
ATM-228ENST00000639240 RELNP78509 3460 aa-0.43□□□□□ -2.48
ATM-228ENST00000639240 SERF2P84101 59 aa-0.43□□□□□ -2.48
ATM-228ENST00000639240 MAST1Q9Y2H9 1570 aa-0.44□□□□□ -2.48
ATM-228ENST00000639240 DEFB110Q30KQ9 67 aa-0.44□□□□□ -2.48
ATM-228ENST00000639240 NOP10Q9NPE3 64 aaKnown RBP-0.44□□□□□ -2.48
ATM-228ENST00000639240 SPENQ96T58 3664 aaKnown RBP-0.44□□□□□ -2.48
ATM-228ENST00000639240 A0A0C4DFX4 3053 aa-0.44□□□□□ -2.48
ATM-228ENST00000639240 DNAH11Q96DT5 4516 aa-0.45□□□□□ -2.48
ATM-228ENST00000639240 SACSQ9NZJ4 4579 aa-0.45□□□□□ -2.48
ATM-228ENST00000639240 A0A1B0GUL6 1792 aa-0.46□□□□□ -2.48
ATM-228ENST00000639240 MMP24-AS1A0A0U1RRL7 71 aa-0.46□□□□□ -2.48
ATM-228ENST00000639240 M0R1W7 72 aa-0.46□□□□□ -2.48
ATM-228ENST00000639240 NMES1Q9C002 83 aa-0.46□□□□□ -2.48
ATM-228ENST00000639240 RIF1Q5UIP0 2472 aaKnown RBP-0.47□□□□□ -2.48
ATM-228ENST00000639240 STARD9Q9P2P6 4700 aa-0.47□□□□□ -2.48
ATM-228ENST00000639240 IGIPA6NJ69 53 aa-0.47□□□□□ -2.48
ATM-228ENST00000639240 SFTA3P0C7M3 94 aa-0.47□□□□□ -2.48
ATM-228ENST00000639240 EEA1Q15075 1411 aa-0.47□□□□□ -2.49
ATM-228ENST00000639240 DNAH2Q9P225 4427 aa-0.48□□□□□ -2.49
ATM-228ENST00000639240 MUC17Q685J3 4493 aa-0.48□□□□□ -2.49
ATM-228ENST00000639240 CCDC168Q8NDH2 2452 aa-0.48□□□□□ -2.49
ATM-228ENST00000639240 SMIM31A0A1B0GVY4 71 aa-0.48□□□□□ -2.49
ATM-228ENST00000639240 ERICH3Q5RHP9 1530 aa-0.48□□□□□ -2.49
ATM-228ENST00000639240 UGGT1Q9NYU2 1555 aa-0.49□□□□□ -2.49
ATM-228ENST00000639240 TLN2Q9Y4G6 2542 aa-0.49□□□□□ -2.49
ATM-228ENST00000639240 TNP1P09430 55 aa-0.49□□□□□ -2.49
ATM-228ENST00000639240 TMEM167BQ9NRX6 74 aa-0.49□□□□□ -2.49
ATM-228ENST00000639240 USP9YO00507 2555 aaPredicted RBP-0.5□□□□□ -2.49
ATM-228ENST00000639240 KRTAP19-5Q3LI72 72 aa-0.5□□□□□ -2.49
ATM-228ENST00000639240 S100ZQ8WXG8 99 aa-0.5□□□□□ -2.49
ATM-228ENST00000639240 DNAH1Q9P2D7 4330 aa-0.5□□□□□ -2.49
ATM-228ENST00000639240 FRYQ5TBA9 3013 aa-0.5□□□□□ -2.49
ATM-228ENST00000639240 COL12A1Q99715 3063 aa-0.5□□□□□ -2.49
ATM-228ENST00000639240 HERC1Q15751 4861 aa-0.5□□□□□ -2.49
ATM-228ENST00000639240 FAM208AQ9UK61 1670 aaKnown RBP-0.5□□□□□ -2.49
ATM-228ENST00000639240 HERC2O95714 4834 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms