RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 C20orf166-AS1Q96NR2 134 aa11.48□□□□□ -0.57
SCN1B-206ENST00000638536 H3BT86 120 aa11.47□□□□□ -0.57
SCN1B-206ENST00000638536 LCE2CQ5TA81 110 aa11.47□□□□□ -0.57
SCN1B-206ENST00000638536 A8MUU9 505 aa11.46□□□□□ -0.57
SCN1B-206ENST00000638536 KRTAP16-1A8MUX0 517 aa11.46□□□□□ -0.58
SCN1B-206ENST00000638536 LINC00313P59037 77 aa11.46□□□□□ -0.58
SCN1B-206ENST00000638536 IGHV6-1A0A0B4J1U7 121 aa11.44□□□□□ -0.58
SCN1B-206ENST00000638536 J3QR89 54 aa11.44□□□□□ -0.58
SCN1B-206ENST00000638536 PDE6GP18545 87 aa11.43□□□□□ -0.58
SCN1B-206ENST00000638536 ATP11AUNQ6ZP68 121 aa11.43□□□□□ -0.58
SCN1B-206ENST00000638536 SMCPP49901 116 aaPredicted RBP11.42□□□□□ -0.58
SCN1B-206ENST00000638536 PRO0461Q9UI25 63 aa11.4□□□□□ -0.58
SCN1B-206ENST00000638536 C21orf62-AS1Q17RA5 79 aa11.39□□□□□ -0.59
SCN1B-206ENST00000638536 A0A1B0GVX0 72 aa11.38□□□□□ -0.59
SCN1B-206ENST00000638536 A0A1B0GW54 56 aa11.38□□□□□ -0.59
SCN1B-206ENST00000638536 J3KT08 172 aa11.35□□□□□ -0.59
SCN1B-206ENST00000638536 ETDBQ3ZM63 59 aa11.33□□□□□ -0.6
SCN1B-206ENST00000638536 PCP4P48539 62 aa11.32□□□□□ -0.6
SCN1B-206ENST00000638536 FLGP20930 4061 aaPredicted RBP11.31□□□□□ -0.6
SCN1B-206ENST00000638536 C8orf87E5RJ46 101 aa11.3□□□□□ -0.6
SCN1B-206ENST00000638536 NREPQ16612 68 aa11.29□□□□□ -0.6
SCN1B-206ENST00000638536 IGKV3D-7A0A0C4DH55 119 aa11.28□□□□□ -0.6
SCN1B-206ENST00000638536 MT1HP80294 61 aa11.27□□□□□ -0.6
SCN1B-206ENST00000638536 A8MWP4 228 aa11.27□□□□□ -0.61
SCN1B-206ENST00000638536 NDUFB1O75438 58 aa11.24□□□□□ -0.61
SCN1B-206ENST00000638536 C8orf17Q9NRJ1 99 aa11.22□□□□□ -0.61
SCN1B-206ENST00000638536 PRR15Q8IV56 129 aa11.2□□□□□ -0.62
SCN1B-206ENST00000638536 COX6B2Q6YFQ2 88 aa11.19□□□□□ -0.62
SCN1B-206ENST00000638536 SCGB1A1P11684 91 aa11.18□□□□□ -0.62
SCN1B-206ENST00000638536 K7EQZ3 153 aa11.16□□□□□ -0.62
SCN1B-206ENST00000638536 Q6ZVQ6 151 aa11.16□□□□□ -0.62
SCN1B-206ENST00000638536 Q8N9P0 234 aaPredicted RBP11.16□□□□□ -0.62
SCN1B-206ENST00000638536 MMP24-AS1A0A0U1RRL7 71 aa11.13□□□□□ -0.63
SCN1B-206ENST00000638536 LINC00846Q9NV44 126 aa11.11□□□□□ -0.63
SCN1B-206ENST00000638536 BPY2O14599 106 aa11.1□□□□□ -0.63
SCN1B-206ENST00000638536 ZCCHC13Q8WW36 166 aaKnown RBP11.1□□□□□ -0.63
SCN1B-206ENST00000638536 Q8N9L7 120 aa11.08□□□□□ -0.64
SCN1B-206ENST00000638536 HRES1P13985 223 aa11.06□□□□□ -0.64
SCN1B-206ENST00000638536 KRTAP9-2Q9BYQ4 174 aa11.05□□□□□ -0.64
SCN1B-206ENST00000638536 TMEM254Q8TBM7 123 aa11.03□□□□□ -0.64
SCN1B-206ENST00000638536 MRPL34Q9BQ48 92 aaKnown RBP11.03□□□□□ -0.64
SCN1B-206ENST00000638536 hDV103S1A0JD37 113 aa11.02□□□□□ -0.65
SCN1B-206ENST00000638536 M0R2T5 61 aa11.02□□□□□ -0.65
SCN1B-206ENST00000638536 MPLKIPQ8TAP9 179 aa11.02□□□□□ -0.65
SCN1B-206ENST00000638536 FAM240AA0A1B0GVK7 77 aa11.01□□□□□ -0.65
SCN1B-206ENST00000638536 KRTAP10-6P60371 365 aaPredicted RBP11.01□□□□□ -0.65
SCN1B-206ENST00000638536 LORP23490 312 aaPredicted RBP10.99□□□□□ -0.65
SCN1B-206ENST00000638536 UBL5Q9BZL1 73 aa10.98□□□□□ -0.65
SCN1B-206ENST00000638536 SPINK7P58062 85 aa10.97□□□□□ -0.65
SCN1B-206ENST00000638536 WFDC13Q8IUB5 93 aa10.96□□□□□ -0.65
SCN1B-206ENST00000638536 ACYP1P07311 99 aa10.95□□□□□ -0.66
SCN1B-206ENST00000638536 NDUFS5O43920 106 aa10.92□□□□□ -0.66
SCN1B-206ENST00000638536 MT-ATP8P03928 68 aa10.92□□□□□ -0.66
SCN1B-206ENST00000638536 FAM236DA0A1B0GTK5 79 aa10.9□□□□□ -0.66
SCN1B-206ENST00000638536 FAM236CP0DP71 79 aa10.9□□□□□ -0.66
SCN1B-206ENST00000638536 CASC2Q6XLA1 102 aa10.9□□□□□ -0.66
SCN1B-206ENST00000638536 RBM12B-AS1Q9P1G2 102 aa10.89□□□□□ -0.67
SCN1B-206ENST00000638536 Q5W150 140 aa10.87□□□□□ -0.67
SCN1B-206ENST00000638536 HCG22E2RYF7 251 aa10.83□□□□□ -0.68
SCN1B-206ENST00000638536 LCE2DQ5TA82 110 aaPredicted RBP10.83□□□□□ -0.68
SCN1B-206ENST00000638536 CXCL6P80162 114 aa10.78□□□□□ -0.68
SCN1B-206ENST00000638536 IMUPQ9GZP8 106 aa10.78□□□□□ -0.68
SCN1B-206ENST00000638536 LINC00643Q86TS7 51 aa10.77□□□□□ -0.68
SCN1B-206ENST00000638536 IGKV2D-30A0A075B6S6 120 aa10.73□□□□□ -0.69
SCN1B-206ENST00000638536 IGKV2-30P06310 120 aa10.73□□□□□ -0.69
SCN1B-206ENST00000638536 KRTAP9-8Q9BYQ0 159 aa10.73□□□□□ -0.69
SCN1B-206ENST00000638536 FSIP2Q5CZC0 6907 aa10.72□□□□□ -0.69
SCN1B-206ENST00000638536 ANAPC13Q9BS18 74 aa10.71□□□□□ -0.69
SCN1B-206ENST00000638536 C7orf65Q6ZTY9 151 aa10.66□□□□□ -0.7
SCN1B-206ENST00000638536 MT2AP02795 61 aa10.58□□□□□ -0.72
SCN1B-206ENST00000638536 ATP5EP2Q5VTU8 51 aa10.57□□□□□ -0.72
SCN1B-206ENST00000638536 KRTAP9-6A0A140TA67 174 aa10.56□□□□□ -0.72
SCN1B-206ENST00000638536 TP53AIP1Q9HCN2 124 aa10.55□□□□□ -0.72
SCN1B-206ENST00000638536 C4orf26Q17RF5 130 aa10.55□□□□□ -0.72
SCN1B-206ENST00000638536 HIST1H4AP62805 103 aaKnown RBP10.54□□□□□ -0.72
SCN1B-206ENST00000638536 FAM236AA0A1B0GUQ0 79 aa10.52□□□□□ -0.73
SCN1B-206ENST00000638536 FAM236BA0A1B0GV22 79 aa10.52□□□□□ -0.73
SCN1B-206ENST00000638536 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.73
SCN1B-206ENST00000638536 MT1FP04733 61 aa10.51□□□□□ -0.73
SCN1B-206ENST00000638536 A0A087WVE0 104 aa10.49□□□□□ -0.73
SCN1B-206ENST00000638536 ATOX1O00244 68 aa10.47□□□□□ -0.73
SCN1B-206ENST00000638536 CRCT1Q9UGL9 99 aa10.46□□□□□ -0.74
SCN1B-206ENST00000638536 KRTAP3-1Q9BYR8 98 aa10.45□□□□□ -0.74
SCN1B-206ENST00000638536 USH2AO75445 5202 aa10.42□□□□□ -0.74
SCN1B-206ENST00000638536 CCDC179H3BU77 68 aa10.42□□□□□ -0.74
SCN1B-206ENST00000638536 KRTAP10-10P60014 251 aa10.42□□□□□ -0.74
SCN1B-206ENST00000638536 UQCRQO14949 82 aa10.4□□□□□ -0.74
SCN1B-206ENST00000638536 TRAV22A0A0B4J277 110 aa10.38□□□□□ -0.75
SCN1B-206ENST00000638536 KRTAP9-3Q9BYQ3 159 aa10.37□□□□□ -0.75
SCN1B-206ENST00000638536 CYP4F30PQ9H0H9 118 aa10.37□□□□□ -0.75
SCN1B-206ENST00000638536 COX7CP15954 63 aa10.36□□□□□ -0.75
SCN1B-206ENST00000638536 C1orf64Q8NEQ6 169 aa10.35□□□□□ -0.75
SCN1B-206ENST00000638536 SERP2Q8N6R1 65 aa10.32□□□□□ -0.76
SCN1B-206ENST00000638536 LCE2BO14633 110 aa10.3□□□□□ -0.76
SCN1B-206ENST00000638536 SSPOA2VEC9 5147 aa10.29□□□□□ -0.76
SCN1B-206ENST00000638536 LOC101927531A0A1B0GV80 90 aa10.29□□□□□ -0.76
SCN1B-206ENST00000638536 H0Y9P7 68 aa10.29□□□□□ -0.76
SCN1B-206ENST00000638536 SMIM20Q8N5G0 67 aa10.25□□□□□ -0.77
SCN1B-206ENST00000638536 OCR1Q9BZK8 76 aa10.24□□□□□ -0.77
SCN1B-206ENST00000638536 C5orf47Q569G3 176 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms