RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 TENM3Q9P273 2699 aa4.6□□□□□ -1.67
SCN8A-212ENST00000636945 Q5W150 140 aa4.6□□□□□ -1.67
SCN8A-212ENST00000636945 ACYP2P14621 99 aa4.59□□□□□ -1.67
SCN8A-212ENST00000636945 KRTAP1-5Q9BYS1 174 aa4.59□□□□□ -1.67
SCN8A-212ENST00000636945 CMYA5Q8N3K9 4069 aa4.59□□□□□ -1.67
SCN8A-212ENST00000636945 DNAH9Q9NYC9 4486 aa4.59□□□□□ -1.67
SCN8A-212ENST00000636945 CSMD3Q7Z407 3707 aa4.58□□□□□ -1.68
SCN8A-212ENST00000636945 TGP01266 2768 aa4.58□□□□□ -1.68
SCN8A-212ENST00000636945 IGHV6-1A0A0B4J1U7 121 aa4.58□□□□□ -1.68
SCN8A-212ENST00000636945 WWC2-AS2Q96NR7 200 aa4.57□□□□□ -1.68
SCN8A-212ENST00000636945 C14orf177Q52M58 125 aa4.54□□□□□ -1.68
SCN8A-212ENST00000636945 PANO1I0J062 215 aa4.53□□□□□ -1.68
SCN8A-212ENST00000636945 PRKDCP78527 4128 aaKnown RBP4.53□□□□□ -1.68
SCN8A-212ENST00000636945 IGLV9-49A0A0B4J1Y8 123 aa4.53□□□□□ -1.68
SCN8A-212ENST00000636945 HUWE1Q7Z6Z7 4374 aaKnown RBP4.53□□□□□ -1.68
SCN8A-212ENST00000636945 A0A1B0GU69 56 aa4.53□□□□□ -1.68
SCN8A-212ENST00000636945 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
SCN8A-212ENST00000636945 DYNC2H1Q8NCM8 4307 aaKnown RBP4.51□□□□□ -1.69
SCN8A-212ENST00000636945 UQCR11O14957 56 aa4.51□□□□□ -1.69
SCN8A-212ENST00000636945 CDK2AP2O75956 126 aa4.51□□□□□ -1.69
SCN8A-212ENST00000636945 STAB2Q8WWQ8 2551 aa4.5□□□□□ -1.69
SCN8A-212ENST00000636945 SPACA4Q8TDM5 124 aa4.5□□□□□ -1.69
SCN8A-212ENST00000636945 ZNF706Q9Y5V0 76 aaPredicted RBP4.5□□□□□ -1.69
SCN8A-212ENST00000636945 DNAH8Q96JB1 4490 aa4.5□□□□□ -1.69
SCN8A-212ENST00000636945 H3BS24 57 aa4.49□□□□□ -1.69
SCN8A-212ENST00000636945 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
SCN8A-212ENST00000636945 ZNF861PO60384 105 aa4.48□□□□□ -1.69
SCN8A-212ENST00000636945 RETNLBQ9BQ08 111 aa4.48□□□□□ -1.69
SCN8A-212ENST00000636945 Q6ZRN7 208 aaPredicted RBP4.47□□□□□ -1.69
SCN8A-212ENST00000636945 CSAG1Q6PB30 78 aa4.47□□□□□ -1.69
SCN8A-212ENST00000636945 FAM229AH3BQW9 127 aa4.46□□□□□ -1.7
SCN8A-212ENST00000636945 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.46□□□□□ -1.7
SCN8A-212ENST00000636945 COL7A1Q02388 2944 aa4.46□□□□□ -1.7
SCN8A-212ENST00000636945 IGLV5-52A0A0A0MRZ9 124 aa4.45□□□□□ -1.7
SCN8A-212ENST00000636945 IGLV7-43P04211 117 aa4.45□□□□□ -1.7
SCN8A-212ENST00000636945 FRAS1Q86XX4 4008 aa4.45□□□□□ -1.7
SCN8A-212ENST00000636945 KRTAP16-1A8MUX0 517 aa4.44□□□□□ -1.7
SCN8A-212ENST00000636945 APLNQ9ULZ1 77 aa4.44□□□□□ -1.7
SCN8A-212ENST00000636945 NUPR2A6NF83 97 aa4.43□□□□□ -1.7
SCN8A-212ENST00000636945 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
SCN8A-212ENST00000636945 ANAPC11Q9NYG5 84 aa4.42□□□□□ -1.7
SCN8A-212ENST00000636945 DNAH7Q8WXX0 4024 aa4.42□□□□□ -1.7
SCN8A-212ENST00000636945 IGKV2D-30A0A075B6S6 120 aa4.4□□□□□ -1.7
SCN8A-212ENST00000636945 A8MUU9 505 aa4.39□□□□□ -1.71
SCN8A-212ENST00000636945 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
SCN8A-212ENST00000636945 SPINK6Q6UWN8 80 aa4.39□□□□□ -1.71
SCN8A-212ENST00000636945 SSBP3-AS1Q7Z2R9 100 aa4.39□□□□□ -1.71
SCN8A-212ENST00000636945 VPS13DQ5THJ4 4388 aa4.38□□□□□ -1.71
SCN8A-212ENST00000636945 NBDYA0A0U1RRE5 68 aa4.38□□□□□ -1.71
SCN8A-212ENST00000636945 LY6G6CO95867 125 aa4.37□□□□□ -1.71
SCN8A-212ENST00000636945 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
SCN8A-212ENST00000636945 DNAH17Q9UFH2 4485 aa4.36□□□□□ -1.71
SCN8A-212ENST00000636945 H0YAA0 97 aa4.35□□□□□ -1.71
SCN8A-212ENST00000636945 UBE2DNLQ8IWF7 75 aa4.35□□□□□ -1.71
SCN8A-212ENST00000636945 PLECQ15149 4684 aaKnown RBP4.35□□□□□ -1.71
SCN8A-212ENST00000636945 Q6ZSA8 131 aa4.34□□□□□ -1.71
SCN8A-212ENST00000636945 ROMO1P60602 79 aa4.34□□□□□ -1.71
SCN8A-212ENST00000636945 LINC00304Q8N9R0 145 aa4.34□□□□□ -1.72
SCN8A-212ENST00000636945 A0A087WTM6 91 aa4.33□□□□□ -1.72
SCN8A-212ENST00000636945 C1orf134Q5TEV5 83 aa4.33□□□□□ -1.72
SCN8A-212ENST00000636945 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
SCN8A-212ENST00000636945 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
SCN8A-212ENST00000636945 KMT2CQ8NEZ4 4911 aaKnown RBP4.28□□□□□ -1.72
SCN8A-212ENST00000636945 STARD9Q9P2P6 4700 aa4.28□□□□□ -1.72
SCN8A-212ENST00000636945 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
SCN8A-212ENST00000636945 DNAH6Q9C0G6 4158 aa4.26□□□□□ -1.73
SCN8A-212ENST00000636945 TYMSOSQ8TAI1 123 aa4.25□□□□□ -1.73
SCN8A-212ENST00000636945 RYR2Q92736 4967 aa4.24□□□□□ -1.73
SCN8A-212ENST00000636945 P0C880 135 aa4.24□□□□□ -1.73
SCN8A-212ENST00000636945 SACSQ9NZJ4 4579 aa4.24□□□□□ -1.73
SCN8A-212ENST00000636945 DNAH11Q96DT5 4516 aa4.24□□□□□ -1.73
SCN8A-212ENST00000636945 H1FX-AS1Q4G0G2 97 aa4.23□□□□□ -1.73
SCN8A-212ENST00000636945 A0A1B0GU33 70 aa4.23□□□□□ -1.73
SCN8A-212ENST00000636945 RYR3Q15413 4870 aa4.23□□□□□ -1.73
SCN8A-212ENST00000636945 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
SCN8A-212ENST00000636945 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
SCN8A-212ENST00000636945 Q8N1X5 172 aa4.22□□□□□ -1.73
SCN8A-212ENST00000636945 SPINK1P00995 79 aa4.21□□□□□ -1.74
SCN8A-212ENST00000636945 KMT2AQ03164 3969 aa4.21□□□□□ -1.74
SCN8A-212ENST00000636945 DNAH5Q8TE73 4624 aa4.19□□□□□ -1.74
SCN8A-212ENST00000636945 HYDINQ4G0P3 5121 aa4.18□□□□□ -1.74
SCN8A-212ENST00000636945 RPS29P62273 56 aaKnown RBP4.15□□□□□ -1.74
SCN8A-212ENST00000636945 LRP1BQ9NZR2 4599 aa4.15□□□□□ -1.74
SCN8A-212ENST00000636945 A0A1B0GVY2 172 aa4.14□□□□□ -1.75
SCN8A-212ENST00000636945 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
SCN8A-212ENST00000636945 COX6B2Q6YFQ2 88 aa4.14□□□□□ -1.75
SCN8A-212ENST00000636945 PKD1P98161 4303 aa4.11□□□□□ -1.75
SCN8A-212ENST00000636945 K7ERS5 55 aa4.1□□□□□ -1.75
SCN8A-212ENST00000636945 TPRXLQ17RH7 258 aa4.1□□□□□ -1.75
SCN8A-212ENST00000636945 EPPK1P58107 5090 aaKnown RBP4.1□□□□□ -1.75
SCN8A-212ENST00000636945 KRTAP10-2P60368 255 aa4.09□□□□□ -1.75
SCN8A-212ENST00000636945 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
SCN8A-212ENST00000636945 CRIPTQ9P021 101 aa4.09□□□□□ -1.75
SCN8A-212ENST00000636945 BIRC6Q9NR09 4857 aa4.09□□□□□ -1.75
SCN8A-212ENST00000636945 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
SCN8A-212ENST00000636945 VPS13BQ7Z7G8 4022 aa4.08□□□□□ -1.76
SCN8A-212ENST00000636945 RPL37P61927 97 aaKnown RBP4.06□□□□□ -1.76
SCN8A-212ENST00000636945 KRTAP10-1P60331 282 aa4.05□□□□□ -1.76
SCN8A-212ENST00000636945 KRTAP13-4Q3LI77 160 aa4.05□□□□□ -1.76
SCN8A-212ENST00000636945 PKHD1L1Q86WI1 4243 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms