RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.04□□□□□ -1.6
CHD2-226ENST00000636881 ANK2Q01484 3957 aa5.04□□□□□ -1.6
CHD2-226ENST00000636881 PLA2G1BP04054 148 aaKnown RBP5.03□□□□□ -1.6
CHD2-226ENST00000636881 DMAC1Q96GE9 116 aa5.03□□□□□ -1.6
CHD2-226ENST00000636881 RETNLBQ9BQ08 111 aa5.03□□□□□ -1.6
CHD2-226ENST00000636881 SPACA4Q8TDM5 124 aa5.02□□□□□ -1.61
CHD2-226ENST00000636881 APLNQ9ULZ1 77 aa5.02□□□□□ -1.61
CHD2-226ENST00000636881 KRTAP13-3Q3SY46 172 aa5.02□□□□□ -1.61
CHD2-226ENST00000636881 LINC01554Q52M75 96 aa5.02□□□□□ -1.61
CHD2-226ENST00000636881 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
CHD2-226ENST00000636881 CIRBP-AS1Q8TBR5 109 aa5.01□□□□□ -1.61
CHD2-226ENST00000636881 PSORS1C2Q9UIG4 136 aa5.01□□□□□ -1.61
CHD2-226ENST00000636881 SPATA8Q6RVD6 105 aa5.01□□□□□ -1.61
CHD2-226ENST00000636881 NBDYA0A0U1RRE5 68 aa5□□□□□ -1.61
CHD2-226ENST00000636881 UQCR11O14957 56 aa5□□□□□ -1.61
CHD2-226ENST00000636881 ZNF861PO60384 105 aa5□□□□□ -1.61
CHD2-226ENST00000636881 IGLV5-52A0A0A0MRZ9 124 aa4.99□□□□□ -1.61
CHD2-226ENST00000636881 FAM229AH3BQW9 127 aa4.98□□□□□ -1.61
CHD2-226ENST00000636881 RTL8CO15255 209 aa4.97□□□□□ -1.61
CHD2-226ENST00000636881 ALMS1Q8TCU4 4167 aa4.97□□□□□ -1.61
CHD2-226ENST00000636881 COL7A1Q02388 2944 aa4.97□□□□□ -1.61
CHD2-226ENST00000636881 HUWE1Q7Z6Z7 4374 aaKnown RBP4.97□□□□□ -1.61
CHD2-226ENST00000636881 DNAH9Q9NYC9 4486 aa4.96□□□□□ -1.61
CHD2-226ENST00000636881 CMYA5Q8N3K9 4069 aa4.96□□□□□ -1.62
CHD2-226ENST00000636881 IGKV2-30P06310 120 aa4.96□□□□□ -1.62
CHD2-226ENST00000636881 Q6ZRN7 208 aaPredicted RBP4.96□□□□□ -1.62
CHD2-226ENST00000636881 CSMD3Q7Z407 3707 aa4.95□□□□□ -1.62
CHD2-226ENST00000636881 STAB2Q8WWQ8 2551 aa4.94□□□□□ -1.62
CHD2-226ENST00000636881 DNAH3Q8TD57 4116 aa4.94□□□□□ -1.62
CHD2-226ENST00000636881 A0A087WTM6 91 aa4.93□□□□□ -1.62
CHD2-226ENST00000636881 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
CHD2-226ENST00000636881 CSAG1Q6PB30 78 aa4.93□□□□□ -1.62
CHD2-226ENST00000636881 LCE2DQ5TA82 110 aaPredicted RBP4.92□□□□□ -1.62
CHD2-226ENST00000636881 LYSTQ99698 3801 aa4.91□□□□□ -1.62
CHD2-226ENST00000636881 SSBP3-AS1Q7Z2R9 100 aa4.91□□□□□ -1.62
CHD2-226ENST00000636881 IGLV7-43P04211 117 aa4.91□□□□□ -1.62
CHD2-226ENST00000636881 H3BS24 57 aa4.89□□□□□ -1.63
CHD2-226ENST00000636881 NUPR2A6NF83 97 aa4.88□□□□□ -1.63
CHD2-226ENST00000636881 SPINK1P00995 79 aa4.88□□□□□ -1.63
CHD2-226ENST00000636881 MGAM2Q2M2H8 2515 aa4.87□□□□□ -1.63
CHD2-226ENST00000636881 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
CHD2-226ENST00000636881 KRTAP3-3Q9BYR6 98 aa4.84□□□□□ -1.64
CHD2-226ENST00000636881 KRTAP3-2Q9BYR7 98 aa4.84□□□□□ -1.64
CHD2-226ENST00000636881 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
CHD2-226ENST00000636881 Q8N1X5 172 aa4.81□□□□□ -1.64
CHD2-226ENST00000636881 DNAH7Q8WXX0 4024 aa4.81□□□□□ -1.64
CHD2-226ENST00000636881 FRAS1Q86XX4 4008 aa4.8□□□□□ -1.64
CHD2-226ENST00000636881 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
CHD2-226ENST00000636881 PLECQ15149 4684 aaKnown RBP4.79□□□□□ -1.64
CHD2-226ENST00000636881 LY6G6CO95867 125 aa4.79□□□□□ -1.64
CHD2-226ENST00000636881 C1orf134Q5TEV5 83 aa4.78□□□□□ -1.64
CHD2-226ENST00000636881 DYNC2H1Q8NCM8 4307 aaKnown RBP4.77□□□□□ -1.65
CHD2-226ENST00000636881 TGP01266 2768 aa4.77□□□□□ -1.65
CHD2-226ENST00000636881 A8MUU9 505 aa4.75□□□□□ -1.65
CHD2-226ENST00000636881 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
CHD2-226ENST00000636881 Q6ZSA8 131 aa4.75□□□□□ -1.65
CHD2-226ENST00000636881 HECTD4Q9Y4D8 3996 aa4.74□□□□□ -1.65
CHD2-226ENST00000636881 H0YAA0 97 aa4.74□□□□□ -1.65
CHD2-226ENST00000636881 DNAH17Q9UFH2 4485 aa4.73□□□□□ -1.65
CHD2-226ENST00000636881 J3QL48 77 aa4.72□□□□□ -1.65
CHD2-226ENST00000636881 LINC00304Q8N9R0 145 aa4.72□□□□□ -1.65
CHD2-226ENST00000636881 A0A1B0GU33 70 aa4.72□□□□□ -1.65
CHD2-226ENST00000636881 MEGF8Q7Z7M0 2845 aa4.71□□□□□ -1.66
CHD2-226ENST00000636881 TYMSOSQ8TAI1 123 aa4.71□□□□□ -1.66
CHD2-226ENST00000636881 VPS13DQ5THJ4 4388 aa4.71□□□□□ -1.66
CHD2-226ENST00000636881 K7ERS5 55 aa4.69□□□□□ -1.66
CHD2-226ENST00000636881 FBN3Q75N90 2809 aa4.69□□□□□ -1.66
CHD2-226ENST00000636881 ROMO1P60602 79 aa4.68□□□□□ -1.66
CHD2-226ENST00000636881 H1FX-AS1Q4G0G2 97 aa4.68□□□□□ -1.66
CHD2-226ENST00000636881 KRTAP10-2P60368 255 aa4.68□□□□□ -1.66
CHD2-226ENST00000636881 KRTAP1-4P0C5Y4 121 aa4.67□□□□□ -1.66
CHD2-226ENST00000636881 CRIPTQ9P021 101 aa4.66□□□□□ -1.66
CHD2-226ENST00000636881 STARD9Q9P2P6 4700 aa4.66□□□□□ -1.66
CHD2-226ENST00000636881 FLG2Q5D862 2391 aaPredicted RBP4.65□□□□□ -1.66
CHD2-226ENST00000636881 KRTAP10-1P60331 282 aa4.63□□□□□ -1.67
CHD2-226ENST00000636881 DNAH2Q9P225 4427 aa4.62□□□□□ -1.67
CHD2-226ENST00000636881 C9orf92A6NGG3 77 aa4.62□□□□□ -1.67
CHD2-226ENST00000636881 KMT2AQ03164 3969 aa4.61□□□□□ -1.67
CHD2-226ENST00000636881 DNAH11Q96DT5 4516 aa4.61□□□□□ -1.67
CHD2-226ENST00000636881 KRTAP3-1Q9BYR8 98 aa4.59□□□□□ -1.67
CHD2-226ENST00000636881 COX6B2Q6YFQ2 88 aa4.58□□□□□ -1.68
CHD2-226ENST00000636881 DNAH6Q9C0G6 4158 aa4.56□□□□□ -1.68
CHD2-226ENST00000636881 PRKDCP78527 4128 aaKnown RBP4.56□□□□□ -1.68
CHD2-226ENST00000636881 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
CHD2-226ENST00000636881 DNAH5Q8TE73 4624 aa4.55□□□□□ -1.68
CHD2-226ENST00000636881 RPS29P62273 56 aaKnown RBP4.55□□□□□ -1.68
CHD2-226ENST00000636881 SPINT4Q6UDR6 99 aa4.54□□□□□ -1.68
CHD2-226ENST00000636881 P0C880 135 aa4.53□□□□□ -1.68
CHD2-226ENST00000636881 LRP1BQ9NZR2 4599 aa4.53□□□□□ -1.68
CHD2-226ENST00000636881 RPL37P61927 97 aaKnown RBP4.52□□□□□ -1.69
CHD2-226ENST00000636881 A0A0D9SG42 100 aa4.51□□□□□ -1.69
CHD2-226ENST00000636881 VPS13BQ7Z7G8 4022 aa4.47□□□□□ -1.69
CHD2-226ENST00000636881 TPRXLQ17RH7 258 aa4.45□□□□□ -1.7
CHD2-226ENST00000636881 SMR3BP02814 79 aaPredicted RBP4.44□□□□□ -1.7
CHD2-226ENST00000636881 DMBT1Q9UGM3 2413 aaPredicted RBP4.43□□□□□ -1.7
CHD2-226ENST00000636881 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
CHD2-226ENST00000636881 KRTAP10-6P60371 365 aaPredicted RBP4.43□□□□□ -1.7
CHD2-226ENST00000636881 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
CHD2-226ENST00000636881 PKD1P98161 4303 aa4.4□□□□□ -1.7
CHD2-226ENST00000636881 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms