RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 Q8N9L7 120 aa7.28□□□□□ -1.24
CTSD-208ENST00000636843 KRTAP9-2Q9BYQ4 174 aa7.28□□□□□ -1.24
CTSD-208ENST00000636843 TPRXLQ17RH7 258 aa7.27□□□□□ -1.25
CTSD-208ENST00000636843 RETNLBQ9BQ08 111 aa7.27□□□□□ -1.25
CTSD-208ENST00000636843 DSCR10P59022 87 aa7.27□□□□□ -1.25
CTSD-208ENST00000636843 LCE2AQ5TA79 106 aaPredicted RBP7.27□□□□□ -1.25
CTSD-208ENST00000636843 FAT4Q6V0I7 4981 aa7.26□□□□□ -1.25
CTSD-208ENST00000636843 MUC17Q685J3 4493 aa7.25□□□□□ -1.25
CTSD-208ENST00000636843 IGLV7-46A0A075B6I9 117 aa7.25□□□□□ -1.25
CTSD-208ENST00000636843 IGLV9-49A0A0B4J1Y8 123 aa7.25□□□□□ -1.25
CTSD-208ENST00000636843 K7EQZ3 153 aa7.22□□□□□ -1.25
CTSD-208ENST00000636843 J3KT08 172 aa7.21□□□□□ -1.26
CTSD-208ENST00000636843 SPAG11AQ6PDA7 123 aa7.21□□□□□ -1.26
CTSD-208ENST00000636843 SS18L2Q9UHA2 77 aa7.21□□□□□ -1.26
CTSD-208ENST00000636843 MOBPQ13875 183 aa7.2□□□□□ -1.26
CTSD-208ENST00000636843 LINC00472Q9H8W2 130 aa7.2□□□□□ -1.26
CTSD-208ENST00000636843 HCG22E2RYF7 251 aa7.18□□□□□ -1.26
CTSD-208ENST00000636843 C20orf197Q8N268 126 aa7.18□□□□□ -1.26
CTSD-208ENST00000636843 OCR1Q9BZK8 76 aa7.18□□□□□ -1.26
CTSD-208ENST00000636843 DEFB116Q30KQ4 102 aa7.17□□□□□ -1.26
CTSD-208ENST00000636843 A8MWP4 228 aa7.17□□□□□ -1.26
CTSD-208ENST00000636843 KLKP1Q107X0 134 aa7.17□□□□□ -1.26
CTSD-208ENST00000636843 FP248Q71RG6 208 aaPredicted RBP7.17□□□□□ -1.26
CTSD-208ENST00000636843 TMEM258P61165 79 aa7.16□□□□□ -1.26
CTSD-208ENST00000636843 C4orf48Q5BLP8 95 aa7.16□□□□□ -1.26
CTSD-208ENST00000636843 PRR15Q8IV56 129 aa7.16□□□□□ -1.26
CTSD-208ENST00000636843 SSBP3-AS1Q7Z2R9 100 aa7.15□□□□□ -1.27
CTSD-208ENST00000636843 CYSTM1Q9H1C7 97 aa7.15□□□□□ -1.27
CTSD-208ENST00000636843 NDUFB1O75438 58 aa7.13□□□□□ -1.27
CTSD-208ENST00000636843 CD164Q04900 197 aa7.13□□□□□ -1.27
CTSD-208ENST00000636843 HRCT1Q6UXD1 115 aa7.12□□□□□ -1.27
CTSD-208ENST00000636843 Q96NJ1 140 aa7.12□□□□□ -1.27
CTSD-208ENST00000636843 NDUFC1O43677 76 aa7.11□□□□□ -1.27
CTSD-208ENST00000636843 TMEM254Q8TBM7 123 aa7.11□□□□□ -1.27
CTSD-208ENST00000636843 KRTAP9-6A0A140TA67 174 aa7.11□□□□□ -1.27
CTSD-208ENST00000636843 SPINK1P00995 79 aa7.1□□□□□ -1.27
CTSD-208ENST00000636843 KRTAP13-3Q3SY46 172 aa7.1□□□□□ -1.27
CTSD-208ENST00000636843 ASB16-AS1Q495Z4 193 aa7.09□□□□□ -1.27
CTSD-208ENST00000636843 CASC2Q6XLA1 102 aa7.09□□□□□ -1.27
CTSD-208ENST00000636843 WFDC13Q8IUB5 93 aa7.09□□□□□ -1.27
CTSD-208ENST00000636843 SNURFQ9Y675 71 aa7.09□□□□□ -1.27
CTSD-208ENST00000636843 H7BZZ5 65 aa7.08□□□□□ -1.28
CTSD-208ENST00000636843 C5orf47Q569G3 176 aa7.07□□□□□ -1.28
CTSD-208ENST00000636843 MMP24-AS1A0A0U1RRL7 71 aa7.06□□□□□ -1.28
CTSD-208ENST00000636843 SEC61BP60468 96 aaKnown RBP7.05□□□□□ -1.28
CTSD-208ENST00000636843 RPS29P62273 56 aaKnown RBP7.05□□□□□ -1.28
CTSD-208ENST00000636843 A0A1B0GVX0 72 aa7.04□□□□□ -1.28
CTSD-208ENST00000636843 FAM236DA0A1B0GTK5 79 aa7.03□□□□□ -1.28
CTSD-208ENST00000636843 hDV103S1A0JD37 113 aa7.03□□□□□ -1.28
CTSD-208ENST00000636843 FAM236CP0DP71 79 aa7.03□□□□□ -1.28
CTSD-208ENST00000636843 RPS28P62857 69 aaKnown RBP7.03□□□□□ -1.28
CTSD-208ENST00000636843 ATP5EP56381 51 aaPredicted RBP7.02□□□□□ -1.29
CTSD-208ENST00000636843 C8orf17Q9NRJ1 99 aa7.02□□□□□ -1.29
CTSD-208ENST00000636843 Q5XG85 94 aa7.01□□□□□ -1.29
CTSD-208ENST00000636843 MP68P56378 58 aa7.01□□□□□ -1.29
CTSD-208ENST00000636843 H3BPC8 53 aa7□□□□□ -1.29
CTSD-208ENST00000636843 KRTAP4-1Q9BYQ7 146 aa7□□□□□ -1.29
CTSD-208ENST00000636843 IGHV6-1A0A0B4J1U7 121 aa6.99□□□□□ -1.29
CTSD-208ENST00000636843 ZCCHC13Q8WW36 166 aaKnown RBP6.99□□□□□ -1.29
CTSD-208ENST00000636843 TP53AIP1Q9HCN2 124 aa6.98□□□□□ -1.29
CTSD-208ENST00000636843 LIMD2Q9BT23 127 aa6.97□□□□□ -1.29
CTSD-208ENST00000636843 XP32Q5T750 250 aa6.96□□□□□ -1.29
CTSD-208ENST00000636843 LCE2DQ5TA82 110 aaPredicted RBP6.96□□□□□ -1.29
CTSD-208ENST00000636843 C8orf87E5RJ46 101 aa6.96□□□□□ -1.3
CTSD-208ENST00000636843 H0Y9P7 68 aa6.95□□□□□ -1.3
CTSD-208ENST00000636843 MRPL34Q9BQ48 92 aaKnown RBP6.95□□□□□ -1.3
CTSD-208ENST00000636843 SERP1Q9Y6X1 66 aa6.94□□□□□ -1.3
CTSD-208ENST00000636843 TRAV22A0A0B4J277 110 aa6.93□□□□□ -1.3
CTSD-208ENST00000636843 LINC00208Q96KT6 92 aa6.92□□□□□ -1.3
CTSD-208ENST00000636843 C1orf195Q5TG92 126 aa6.91□□□□□ -1.3
CTSD-208ENST00000636843 NDUFS5O43920 106 aa6.89□□□□□ -1.31
CTSD-208ENST00000636843 NOTCH2NLQ7Z3S9 236 aa6.89□□□□□ -1.31
CTSD-208ENST00000636843 C1orf64Q8NEQ6 169 aa6.88□□□□□ -1.31
CTSD-208ENST00000636843 LINC00313P59037 77 aa6.87□□□□□ -1.31
CTSD-208ENST00000636843 LCE2CQ5TA81 110 aa6.87□□□□□ -1.31
CTSD-208ENST00000636843 CRCT1Q9UGL9 99 aa6.86□□□□□ -1.31
CTSD-208ENST00000636843 KRTAP19-2Q3LHN2 52 aa6.84□□□□□ -1.31
CTSD-208ENST00000636843 SPANXA2-OT1Q8N9U9 137 aa6.84□□□□□ -1.31
CTSD-208ENST00000636843 CYP4F30PQ9H0H9 118 aa6.84□□□□□ -1.31
CTSD-208ENST00000636843 PCOTHQ58A44 107 aa6.83□□□□□ -1.32
CTSD-208ENST00000636843 C9orf92A6NGG3 77 aa6.81□□□□□ -1.32
CTSD-208ENST00000636843 MT1HP80294 61 aa6.81□□□□□ -1.32
CTSD-208ENST00000636843 Q8N9P0 234 aaPredicted RBP6.81□□□□□ -1.32
CTSD-208ENST00000636843 SMIM26A0A096LP01 95 aa6.79□□□□□ -1.32
CTSD-208ENST00000636843 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
CTSD-208ENST00000636843 KRTAP16-1A8MUX0 517 aa6.77□□□□□ -1.33
CTSD-208ENST00000636843 FSIP2Q5CZC0 6907 aa6.75□□□□□ -1.33
CTSD-208ENST00000636843 Q5W150 140 aa6.75□□□□□ -1.33
CTSD-208ENST00000636843 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
CTSD-208ENST00000636843 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.33
CTSD-208ENST00000636843 RPL37P61927 97 aaKnown RBP6.71□□□□□ -1.34
CTSD-208ENST00000636843 M0R2T5 61 aa6.68□□□□□ -1.34
CTSD-208ENST00000636843 COX6B2Q6YFQ2 88 aa6.67□□□□□ -1.34
CTSD-208ENST00000636843 IGKV2-30P06310 120 aa6.66□□□□□ -1.34
CTSD-208ENST00000636843 FLGP20930 4061 aaPredicted RBP6.65□□□□□ -1.34
CTSD-208ENST00000636843 C4orf26Q17RF5 130 aa6.64□□□□□ -1.35
CTSD-208ENST00000636843 COA5Q86WW8 74 aa6.61□□□□□ -1.35
CTSD-208ENST00000636843 Q1T7F1 81 aa6.6□□□□□ -1.35
CTSD-208ENST00000636843 A8MUU9 505 aa6.6□□□□□ -1.35
CTSD-208ENST00000636843 HRES1P13985 223 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms