RNA–Protein interactions for RNA: ENST00000635990.2

TCF4-277, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,396 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-277ENST00000635990 LINC00483Q53H64 154 aa3.78□□□□□ -1.8
TCF4-277ENST00000635990 CYSTM1Q9H1C7 97 aa3.78□□□□□ -1.8
TCF4-277ENST00000635990 KRTAP21-3Q3LHN1 58 aa3.78□□□□□ -1.8
TCF4-277ENST00000635990 SVEP1Q4LDE5 3571 aa3.77□□□□□ -1.81
TCF4-277ENST00000635990 CELSR1Q9NYQ6 3014 aa3.77□□□□□ -1.81
TCF4-277ENST00000635990 M0QZ58 72 aa3.77□□□□□ -1.81
TCF4-277ENST00000635990 Q6ZR54 194 aa3.77□□□□□ -1.81
TCF4-277ENST00000635990 Q8NDZ9 215 aa3.77□□□□□ -1.81
TCF4-277ENST00000635990 OCR1Q9BZK8 76 aa3.76□□□□□ -1.81
TCF4-277ENST00000635990 CUBNO60494 3623 aa3.76□□□□□ -1.81
TCF4-277ENST00000635990 Q8N9P0 234 aaPredicted RBP3.76□□□□□ -1.81
TCF4-277ENST00000635990 TENM4Q6N022 2769 aa3.76□□□□□ -1.81
TCF4-277ENST00000635990 A0A1B0GU33 70 aa3.75□□□□□ -1.81
TCF4-277ENST00000635990 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
TCF4-277ENST00000635990 DMAC1Q96GE9 116 aa3.73□□□□□ -1.81
TCF4-277ENST00000635990 CSMD2Q7Z408 3487 aa3.73□□□□□ -1.81
TCF4-277ENST00000635990 NIPBLQ6KC79 2804 aaeCLIP3.73□□□□□ -1.81
TCF4-277ENST00000635990 Q5VV11 94 aa3.73□□□□□ -1.81
TCF4-277ENST00000635990 Q5W150 140 aa3.73□□□□□ -1.81
TCF4-277ENST00000635990 DCHS2Q6V1P9 2916 aa3.72□□□□□ -1.81
TCF4-277ENST00000635990 C20orf166-AS1Q96NR2 134 aa3.71□□□□□ -1.82
TCF4-277ENST00000635990 A0A1B0GVY2 172 aa3.7□□□□□ -1.82
TCF4-277ENST00000635990 ASB16-AS1Q495Z4 193 aa3.7□□□□□ -1.82
TCF4-277ENST00000635990 A6NN06 94 aa3.7□□□□□ -1.82
TCF4-277ENST00000635990 KRTAP26-1Q6PEX3 210 aa3.7□□□□□ -1.82
TCF4-277ENST00000635990 TENM1Q9UKZ4 2725 aa3.7□□□□□ -1.82
TCF4-277ENST00000635990 BSNQ9UPA5 3926 aa3.69□□□□□ -1.82
TCF4-277ENST00000635990 FBN2P35556 2912 aa3.69□□□□□ -1.82
TCF4-277ENST00000635990 MMP24-AS1A0A0U1RRL7 71 aa3.69□□□□□ -1.82
TCF4-277ENST00000635990 NF1P21359 2839 aa3.68□□□□□ -1.82
TCF4-277ENST00000635990 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
TCF4-277ENST00000635990 SPRR1AP35321 89 aa3.67□□□□□ -1.82
TCF4-277ENST00000635990 KRTAP11-1Q8IUC1 163 aa3.67□□□□□ -1.82
TCF4-277ENST00000635990 VPS13CQ709C8 3753 aa3.65□□□□□ -1.82
TCF4-277ENST00000635990 Q6ZRN7 208 aaPredicted RBP3.65□□□□□ -1.83
TCF4-277ENST00000635990 H1FX-AS1Q4G0G2 97 aa3.64□□□□□ -1.83
TCF4-277ENST00000635990 ROMO1P60602 79 aa3.64□□□□□ -1.83
TCF4-277ENST00000635990 ZANQ9Y493 2812 aa3.64□□□□□ -1.83
TCF4-277ENST00000635990 LINC01558Q9Y6Z2 57 aa3.64□□□□□ -1.83
TCF4-277ENST00000635990 LINC00472Q9H8W2 130 aa3.64□□□□□ -1.83
TCF4-277ENST00000635990 PKD1L1Q8TDX9 2849 aa3.64□□□□□ -1.83
TCF4-277ENST00000635990 SPANXA2-OT1Q8N9U9 137 aa3.63□□□□□ -1.83
TCF4-277ENST00000635990 SPATA8Q6RVD6 105 aa3.62□□□□□ -1.83
TCF4-277ENST00000635990 A8MUU9 505 aa3.61□□□□□ -1.83
TCF4-277ENST00000635990 HRNRQ86YZ3 2850 aaPredicted RBP3.61□□□□□ -1.83
TCF4-277ENST00000635990 VWFP04275 2813 aa3.6□□□□□ -1.83
TCF4-277ENST00000635990 NOTCH2NLQ7Z3S9 236 aa3.6□□□□□ -1.83
TCF4-277ENST00000635990 SPRR1BP22528 89 aa3.59□□□□□ -1.83
TCF4-277ENST00000635990 KRTAP13-2Q52LG2 175 aa3.58□□□□□ -1.84
TCF4-277ENST00000635990 TENM2Q9NT68 2774 aa3.57□□□□□ -1.84
TCF4-277ENST00000635990 RPL37P61927 97 aaKnown RBP3.56□□□□□ -1.84
TCF4-277ENST00000635990 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
TCF4-277ENST00000635990 TRRAPQ9Y4A5 3859 aa3.55□□□□□ -1.84
TCF4-277ENST00000635990 KRTAP10-8P60410 259 aa3.54□□□□□ -1.84
TCF4-277ENST00000635990 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
TCF4-277ENST00000635990 A8MU10 97 aa3.53□□□□□ -1.84
TCF4-277ENST00000635990 KRTAP4-16G5E9R7 235 aaPredicted RBP3.52□□□□□ -1.85
TCF4-277ENST00000635990 KRTAP7-1Q8IUC3 87 aa3.5□□□□□ -1.85
TCF4-277ENST00000635990 RPS29P62273 56 aaKnown RBP3.49□□□□□ -1.85
TCF4-277ENST00000635990 MXRA5Q9NR99 2828 aa3.49□□□□□ -1.85
TCF4-277ENST00000635990 TENM3Q9P273 2699 aa3.48□□□□□ -1.85
TCF4-277ENST00000635990 XP32Q5T750 250 aa3.46□□□□□ -1.85
TCF4-277ENST00000635990 ZNF469Q96JG9 3925 aaPredicted RBP3.46□□□□□ -1.86
TCF4-277ENST00000635990 CSMD3Q7Z407 3707 aa3.45□□□□□ -1.86
TCF4-277ENST00000635990 AKAP9Q99996 3911 aa3.45□□□□□ -1.86
TCF4-277ENST00000635990 PDZD2O15018 2839 aa3.44□□□□□ -1.86
TCF4-277ENST00000635990 COL7A1Q02388 2944 aa3.44□□□□□ -1.86
TCF4-277ENST00000635990 TNP1P09430 55 aa3.41□□□□□ -1.86
TCF4-277ENST00000635990 KRTAP13-1Q8IUC0 172 aa3.41□□□□□ -1.86
TCF4-277ENST00000635990 KRTAP29-1A8MX34 341 aaPredicted RBP3.41□□□□□ -1.86
TCF4-277ENST00000635990 FBN1P35555 2871 aaKnown RBP3.4□□□□□ -1.86
TCF4-277ENST00000635990 TPRXLQ17RH7 258 aa3.4□□□□□ -1.87
TCF4-277ENST00000635990 ANK3Q12955 4377 aaKnown RBP3.38□□□□□ -1.87
TCF4-277ENST00000635990 TGP01266 2768 aa3.37□□□□□ -1.87
TCF4-277ENST00000635990 KRTAP1-4P0C5Y4 121 aa3.37□□□□□ -1.87
TCF4-277ENST00000635990 PRO2289Q9P1D8 64 aa3.37□□□□□ -1.87
TCF4-277ENST00000635990 C10orf95Q9H7T3 257 aa3.35□□□□□ -1.87
TCF4-277ENST00000635990 MEGF8Q7Z7M0 2845 aa3.34□□□□□ -1.87
TCF4-277ENST00000635990 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
TCF4-277ENST00000635990 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
TCF4-277ENST00000635990 OTOGQ6ZRI0 2925 aa3.29□□□□□ -1.88
TCF4-277ENST00000635990 SRRM2Q9UQ35 2752 aaKnown RBP3.29□□□□□ -1.88
TCF4-277ENST00000635990 P0C880 135 aa3.27□□□□□ -1.89
TCF4-277ENST00000635990 HUWE1Q7Z6Z7 4374 aaKnown RBP3.24□□□□□ -1.89
TCF4-277ENST00000635990 KRTAP4-5Q9BYR2 181 aa3.21□□□□□ -1.9
TCF4-277ENST00000635990 FBN3Q75N90 2809 aa3.17□□□□□ -1.9
TCF4-277ENST00000635990 RYR1P21817 5038 aa3.17□□□□□ -1.9
TCF4-277ENST00000635990 PP632Q6XCG6 107 aa3.15□□□□□ -1.9
TCF4-277ENST00000635990 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
TCF4-277ENST00000635990 ALMS1Q8TCU4 4167 aa3.12□□□□□ -1.91
TCF4-277ENST00000635990 KMT2AQ03164 3969 aa3.09□□□□□ -1.91
TCF4-277ENST00000635990 CMYA5Q8N3K9 4069 aa3.09□□□□□ -1.91
TCF4-277ENST00000635990 H0YAA0 97 aa3.09□□□□□ -1.91
TCF4-277ENST00000635990 FRAS1Q86XX4 4008 aa3.07□□□□□ -1.92
TCF4-277ENST00000635990 ANK2Q01484 3957 aa3.04□□□□□ -1.92
TCF4-277ENST00000635990 LYSTQ99698 3801 aa3.04□□□□□ -1.92
TCF4-277ENST00000635990 LORP23490 312 aaPredicted RBP3.03□□□□□ -1.92
TCF4-277ENST00000635990 KRTAP12-2P59991 146 aa3.03□□□□□ -1.93
TCF4-277ENST00000635990 KRTAP15-1Q3LI76 137 aa3.01□□□□□ -1.93
TCF4-277ENST00000635990 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms