RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 LOC110117498A0A087WWA1 95 aa9.53□□□□□ -0.88
CLN6-210ENST00000635747 F8W1H4 67 aa9.53□□□□□ -0.88
CLN6-210ENST00000635747 IGKV4-1P06312 121 aa9.53□□□□□ -0.88
CLN6-210ENST00000635747 MTURNQ8N3F0 131 aa9.53□□□□□ -0.88
CLN6-210ENST00000635747 SMCPP49901 116 aaPredicted RBP9.52□□□□□ -0.89
CLN6-210ENST00000635747 M0R2T5 61 aa9.51□□□□□ -0.89
CLN6-210ENST00000635747 LINC00313P59037 77 aa9.51□□□□□ -0.89
CLN6-210ENST00000635747 DSCR10P59022 87 aa9.5□□□□□ -0.89
CLN6-210ENST00000635747 A0A1B0GW54 56 aa9.49□□□□□ -0.89
CLN6-210ENST00000635747 KRTAP9-6A0A140TA67 174 aa9.48□□□□□ -0.89
CLN6-210ENST00000635747 Q6ZQT0 140 aa9.48□□□□□ -0.89
CLN6-210ENST00000635747 LINC00472Q9H8W2 130 aa9.48□□□□□ -0.89
CLN6-210ENST00000635747 FLGP20930 4061 aaPredicted RBP9.47□□□□□ -0.89
CLN6-210ENST00000635747 KRTAP10-6P60371 365 aaPredicted RBP9.46□□□□□ -0.9
CLN6-210ENST00000635747 C14orf132Q9NPU4 83 aa9.46□□□□□ -0.9
CLN6-210ENST00000635747 LORP23490 312 aaPredicted RBP9.45□□□□□ -0.9
CLN6-210ENST00000635747 VPS25Q9BRG1 176 aa9.45□□□□□ -0.9
CLN6-210ENST00000635747 A0A1B0GV90 55 aa9.43□□□□□ -0.9
CLN6-210ENST00000635747 DEFB116Q30KQ4 102 aa9.43□□□□□ -0.9
CLN6-210ENST00000635747 IGHV6-1A0A0B4J1U7 121 aa9.4□□□□□ -0.9
CLN6-210ENST00000635747 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.9
CLN6-210ENST00000635747 C8orf87E5RJ46 101 aa9.38□□□□□ -0.91
CLN6-210ENST00000635747 J3KT08 172 aa9.38□□□□□ -0.91
CLN6-210ENST00000635747 ETDBQ3ZM63 59 aa9.37□□□□□ -0.91
CLN6-210ENST00000635747 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
CLN6-210ENST00000635747 A0A1B0GVX0 72 aa9.36□□□□□ -0.91
CLN6-210ENST00000635747 NDUFB1O75438 58 aa9.31□□□□□ -0.92
CLN6-210ENST00000635747 CRCT1Q9UGL9 99 aa9.29□□□□□ -0.92
CLN6-210ENST00000635747 FSIP2Q5CZC0 6907 aa9.27□□□□□ -0.93
CLN6-210ENST00000635747 NREPQ16612 68 aa9.26□□□□□ -0.93
CLN6-210ENST00000635747 RBM12B-AS1Q9P1G2 102 aa9.26□□□□□ -0.93
CLN6-210ENST00000635747 FAM236DA0A1B0GTK5 79 aa9.25□□□□□ -0.93
CLN6-210ENST00000635747 FAM236CP0DP71 79 aa9.25□□□□□ -0.93
CLN6-210ENST00000635747 A8MWP4 228 aa9.22□□□□□ -0.93
CLN6-210ENST00000635747 ZCCHC13Q8WW36 166 aaKnown RBP9.21□□□□□ -0.94
CLN6-210ENST00000635747 FAM240AA0A1B0GVK7 77 aa9.2□□□□□ -0.94
CLN6-210ENST00000635747 ACYP1P07311 99 aa9.2□□□□□ -0.94
CLN6-210ENST00000635747 HRES1P13985 223 aa9.2□□□□□ -0.94
CLN6-210ENST00000635747 MPLKIPQ8TAP9 179 aa9.2□□□□□ -0.94
CLN6-210ENST00000635747 Q8N9P0 234 aaPredicted RBP9.19□□□□□ -0.94
CLN6-210ENST00000635747 UBL5Q9BZL1 73 aa9.19□□□□□ -0.94
CLN6-210ENST00000635747 LINC00846Q9NV44 126 aa9.19□□□□□ -0.94
CLN6-210ENST00000635747 Q6ZVQ6 151 aa9.18□□□□□ -0.94
CLN6-210ENST00000635747 C8orf17Q9NRJ1 99 aa9.18□□□□□ -0.94
CLN6-210ENST00000635747 IGKV3D-7A0A0C4DH55 119 aa9.15□□□□□ -0.94
CLN6-210ENST00000635747 BPY2O14599 106 aa9.13□□□□□ -0.95
CLN6-210ENST00000635747 PRR15Q8IV56 129 aa9.13□□□□□ -0.95
CLN6-210ENST00000635747 SPINK7P58062 85 aa9.12□□□□□ -0.95
CLN6-210ENST00000635747 J3QR89 54 aa9.11□□□□□ -0.95
CLN6-210ENST00000635747 KRTAP9-8Q9BYQ0 159 aa9.11□□□□□ -0.95
CLN6-210ENST00000635747 CXCL6P80162 114 aa9.05□□□□□ -0.96
CLN6-210ENST00000635747 TMEM254Q8TBM7 123 aa9.05□□□□□ -0.96
CLN6-210ENST00000635747 MRPL34Q9BQ48 92 aaKnown RBP9.04□□□□□ -0.96
CLN6-210ENST00000635747 MMP24-AS1A0A0U1RRL7 71 aa9.02□□□□□ -0.97
CLN6-210ENST00000635747 K7EQZ3 153 aa9.02□□□□□ -0.97
CLN6-210ENST00000635747 ATP5EP2Q5VTU8 51 aa9.02□□□□□ -0.97
CLN6-210ENST00000635747 hDV103S1A0JD37 113 aa9.01□□□□□ -0.97
CLN6-210ENST00000635747 LINC00643Q86TS7 51 aa8.98□□□□□ -0.97
CLN6-210ENST00000635747 WFDC13Q8IUB5 93 aa8.98□□□□□ -0.97
CLN6-210ENST00000635747 K7ERU9 68 aa8.97□□□□□ -0.97
CLN6-210ENST00000635747 MT2AP02795 61 aa8.97□□□□□ -0.97
CLN6-210ENST00000635747 NDUFS5O43920 106 aa8.96□□□□□ -0.98
CLN6-210ENST00000635747 Q8N9L7 120 aa8.95□□□□□ -0.98
CLN6-210ENST00000635747 KRTAP10-10P60014 251 aa8.92□□□□□ -0.98
CLN6-210ENST00000635747 HCG22E2RYF7 251 aa8.89□□□□□ -0.99
CLN6-210ENST00000635747 MT1FP04733 61 aa8.89□□□□□ -0.99
CLN6-210ENST00000635747 CASC2Q6XLA1 102 aa8.89□□□□□ -0.99
CLN6-210ENST00000635747 USH2AO75445 5202 aa8.86□□□□□ -0.99
CLN6-210ENST00000635747 C7orf65Q6ZTY9 151 aa8.83□□□□□ -1
CLN6-210ENST00000635747 KRTAP9-3Q9BYQ3 159 aa8.83□□□□□ -1
CLN6-210ENST00000635747 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
CLN6-210ENST00000635747 IGKV2D-30A0A075B6S6 120 aa8.81□□□□□ -1
CLN6-210ENST00000635747 IGKV2-30P06310 120 aa8.81□□□□□ -1
CLN6-210ENST00000635747 HIST1H4AP62805 103 aaKnown RBP8.81□□□□□ -1
CLN6-210ENST00000635747 Q5W150 140 aa8.8□□□□□ -1
CLN6-210ENST00000635747 LCE2BO14633 110 aa8.77□□□□□ -1.01
CLN6-210ENST00000635747 SSPOA2VEC9 5147 aa8.77□□□□□ -1.01
CLN6-210ENST00000635747 IMUPQ9GZP8 106 aa8.75□□□□□ -1.01
CLN6-210ENST00000635747 TP53AIP1Q9HCN2 124 aa8.75□□□□□ -1.01
CLN6-210ENST00000635747 A0A087WVE0 104 aa8.71□□□□□ -1.02
CLN6-210ENST00000635747 MT-ATP8P03928 68 aa8.68□□□□□ -1.02
CLN6-210ENST00000635747 C4orf26Q17RF5 130 aa8.65□□□□□ -1.02
CLN6-210ENST00000635747 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
CLN6-210ENST00000635747 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.62□□□□□ -1.03
CLN6-210ENST00000635747 UQCRQO14949 82 aa8.61□□□□□ -1.03
CLN6-210ENST00000635747 FCGBPQ9Y6R7 5405 aaPredicted RBP8.61□□□□□ -1.03
CLN6-210ENST00000635747 TRAV22A0A0B4J277 110 aa8.56□□□□□ -1.04
CLN6-210ENST00000635747 OCR1Q9BZK8 76 aa8.56□□□□□ -1.04
CLN6-210ENST00000635747 SCGB1A1P11684 91 aa8.55□□□□□ -1.04
CLN6-210ENST00000635747 KRTAP9-7A8MTY7 169 aa8.54□□□□□ -1.04
CLN6-210ENST00000635747 ATOX1O00244 68 aa8.53□□□□□ -1.04
CLN6-210ENST00000635747 C1orf64Q8NEQ6 169 aa8.52□□□□□ -1.05
CLN6-210ENST00000635747 KRTAP19-6Q3LI70 58 aa8.51□□□□□ -1.05
CLN6-210ENST00000635747 SMIM20Q8N5G0 67 aa8.51□□□□□ -1.05
CLN6-210ENST00000635747 FAM236AA0A1B0GUQ0 79 aa8.5□□□□□ -1.05
CLN6-210ENST00000635747 FAM236BA0A1B0GV22 79 aa8.5□□□□□ -1.05
CLN6-210ENST00000635747 S4R3F8 94 aa8.5□□□□□ -1.05
CLN6-210ENST00000635747 LOC101927531A0A1B0GV80 90 aa8.49□□□□□ -1.05
CLN6-210ENST00000635747 C5orf47Q569G3 176 aa8.49□□□□□ -1.05
CLN6-210ENST00000635747 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms