RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 LORP23490 312 aaPredicted RBP8.33□□□□□ -1.08
SNRNP48-203ENST00000634363 KRTAP10-6P60371 365 aaPredicted RBP8.33□□□□□ -1.08
SNRNP48-203ENST00000634363 C14orf132Q9NPU4 83 aa8.33□□□□□ -1.08
SNRNP48-203ENST00000634363 Q6ZQT0 140 aa8.32□□□□□ -1.08
SNRNP48-203ENST00000634363 OBSCN-AS1Q96MR7 158 aa8.32□□□□□ -1.08
SNRNP48-203ENST00000634363 IGKV4-1P06312 121 aa8.31□□□□□ -1.08
SNRNP48-203ENST00000634363 COX6B2Q6YFQ2 88 aa8.3□□□□□ -1.08
SNRNP48-203ENST00000634363 A0A1B0GW54 56 aa8.28□□□□□ -1.08
SNRNP48-203ENST00000634363 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
SNRNP48-203ENST00000634363 DEFB116Q30KQ4 102 aa8.28□□□□□ -1.08
SNRNP48-203ENST00000634363 LINC00472Q9H8W2 130 aa8.28□□□□□ -1.08
SNRNP48-203ENST00000634363 K7EP34 96 aa8.26□□□□□ -1.09
SNRNP48-203ENST00000634363 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
SNRNP48-203ENST00000634363 J3KT08 172 aa8.23□□□□□ -1.09
SNRNP48-203ENST00000634363 DSCR10P59022 87 aa8.23□□□□□ -1.09
SNRNP48-203ENST00000634363 GTF2H5Q6ZYL4 71 aa8.22□□□□□ -1.09
SNRNP48-203ENST00000634363 Q75L30 129 aa8.22□□□□□ -1.09
SNRNP48-203ENST00000634363 LINC00313P59037 77 aa8.21□□□□□ -1.1
SNRNP48-203ENST00000634363 IGHV6-1A0A0B4J1U7 121 aa8.2□□□□□ -1.1
SNRNP48-203ENST00000634363 ATP11AUNQ6ZP68 121 aa8.19□□□□□ -1.1
SNRNP48-203ENST00000634363 A0A1B0GVX0 72 aa8.18□□□□□ -1.1
SNRNP48-203ENST00000634363 PRO0461Q9UI25 63 aa8.18□□□□□ -1.1
SNRNP48-203ENST00000634363 NDUFB1O75438 58 aa8.17□□□□□ -1.1
SNRNP48-203ENST00000634363 NREPQ16612 68 aa8.17□□□□□ -1.1
SNRNP48-203ENST00000634363 C20orf166-AS1Q96NR2 134 aa8.17□□□□□ -1.1
SNRNP48-203ENST00000634363 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
SNRNP48-203ENST00000634363 A8MUU9 505 aa8.15□□□□□ -1.1
SNRNP48-203ENST00000634363 A8MWP4 228 aa8.13□□□□□ -1.11
SNRNP48-203ENST00000634363 NOTCH2NLQ7Z3S9 236 aa8.13□□□□□ -1.11
SNRNP48-203ENST00000634363 KRTAP16-1A8MUX0 517 aa8.11□□□□□ -1.11
SNRNP48-203ENST00000634363 F8W1H4 67 aa8.11□□□□□ -1.11
SNRNP48-203ENST00000634363 IGKV3D-7A0A0C4DH55 119 aa8.07□□□□□ -1.12
SNRNP48-203ENST00000634363 C8orf17Q9NRJ1 99 aa8.06□□□□□ -1.12
SNRNP48-203ENST00000634363 BPY2O14599 106 aa8.05□□□□□ -1.12
SNRNP48-203ENST00000634363 Q6ZVQ6 151 aa8.05□□□□□ -1.12
SNRNP48-203ENST00000634363 PRR15Q8IV56 129 aa8.05□□□□□ -1.12
SNRNP48-203ENST00000634363 ETDBQ3ZM63 59 aa8.04□□□□□ -1.12
SNRNP48-203ENST00000634363 FLGP20930 4061 aaPredicted RBP8.03□□□□□ -1.12
SNRNP48-203ENST00000634363 UBL5Q9BZL1 73 aa8.03□□□□□ -1.12
SNRNP48-203ENST00000634363 KRTAP9-7A8MTY7 169 aa8.01□□□□□ -1.13
SNRNP48-203ENST00000634363 K7EQZ3 153 aa8.01□□□□□ -1.13
SNRNP48-203ENST00000634363 LINC00846Q9NV44 126 aa8.01□□□□□ -1.13
SNRNP48-203ENST00000634363 KRTAP9-1A8MXZ3 250 aaPredicted RBP8□□□□□ -1.13
SNRNP48-203ENST00000634363 MMP24-AS1A0A0U1RRL7 71 aa7.97□□□□□ -1.13
SNRNP48-203ENST00000634363 Q8N9P0 234 aaPredicted RBP7.97□□□□□ -1.13
SNRNP48-203ENST00000634363 TMEM254Q8TBM7 123 aa7.96□□□□□ -1.14
SNRNP48-203ENST00000634363 ZCCHC13Q8WW36 166 aaKnown RBP7.95□□□□□ -1.14
SNRNP48-203ENST00000634363 hDV103S1A0JD37 113 aa7.94□□□□□ -1.14
SNRNP48-203ENST00000634363 Q8N9L7 120 aa7.94□□□□□ -1.14
SNRNP48-203ENST00000634363 MRPL34Q9BQ48 92 aaKnown RBP7.94□□□□□ -1.14
SNRNP48-203ENST00000634363 KRTAP9-8Q9BYQ0 159 aa7.94□□□□□ -1.14
SNRNP48-203ENST00000634363 A0A1B0GV90 55 aa7.92□□□□□ -1.14
SNRNP48-203ENST00000634363 NDUFS5O43920 106 aa7.9□□□□□ -1.14
SNRNP48-203ENST00000634363 WFDC13Q8IUB5 93 aa7.89□□□□□ -1.15
SNRNP48-203ENST00000634363 CASC2Q6XLA1 102 aa7.88□□□□□ -1.15
SNRNP48-203ENST00000634363 ACYP1P07311 99 aa7.87□□□□□ -1.15
SNRNP48-203ENST00000634363 CXCL6P80162 114 aa7.85□□□□□ -1.15
SNRNP48-203ENST00000634363 FAM240AA0A1B0GVK7 77 aa7.84□□□□□ -1.15
SNRNP48-203ENST00000634363 HCG22E2RYF7 251 aa7.84□□□□□ -1.15
SNRNP48-203ENST00000634363 RBM12B-AS1Q9P1G2 102 aa7.83□□□□□ -1.16
SNRNP48-203ENST00000634363 FAM236DA0A1B0GTK5 79 aa7.82□□□□□ -1.16
SNRNP48-203ENST00000634363 FAM236CP0DP71 79 aa7.82□□□□□ -1.16
SNRNP48-203ENST00000634363 SPINK7P58062 85 aa7.82□□□□□ -1.16
SNRNP48-203ENST00000634363 HRES1P13985 223 aa7.81□□□□□ -1.16
SNRNP48-203ENST00000634363 MT2AP02795 61 aa7.79□□□□□ -1.16
SNRNP48-203ENST00000634363 ATP5EP2Q5VTU8 51 aa7.77□□□□□ -1.17
SNRNP48-203ENST00000634363 KRTAP19-1Q8IUB9 90 aa7.77□□□□□ -1.17
SNRNP48-203ENST00000634363 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
SNRNP48-203ENST00000634363 KRTAP10-10P60014 251 aa7.75□□□□□ -1.17
SNRNP48-203ENST00000634363 MT1FP04733 61 aa7.74□□□□□ -1.17
SNRNP48-203ENST00000634363 Q5W150 140 aa7.72□□□□□ -1.17
SNRNP48-203ENST00000634363 IGKV2D-30A0A075B6S6 120 aa7.71□□□□□ -1.18
SNRNP48-203ENST00000634363 J3QR89 54 aa7.71□□□□□ -1.18
SNRNP48-203ENST00000634363 IGKV2-30P06310 120 aa7.71□□□□□ -1.18
SNRNP48-203ENST00000634363 C7orf65Q6ZTY9 151 aa7.7□□□□□ -1.18
SNRNP48-203ENST00000634363 KRTAP9-3Q9BYQ3 159 aa7.7□□□□□ -1.18
SNRNP48-203ENST00000634363 USH2AO75445 5202 aa7.7□□□□□ -1.18
SNRNP48-203ENST00000634363 HIST1H4AP62805 103 aaKnown RBP7.69□□□□□ -1.18
SNRNP48-203ENST00000634363 LINC00643Q86TS7 51 aa7.69□□□□□ -1.18
SNRNP48-203ENST00000634363 SSPOA2VEC9 5147 aa7.68□□□□□ -1.18
SNRNP48-203ENST00000634363 TP53AIP1Q9HCN2 124 aa7.68□□□□□ -1.18
SNRNP48-203ENST00000634363 FCGBPQ9Y6R7 5405 aaPredicted RBP7.63□□□□□ -1.19
SNRNP48-203ENST00000634363 A0A087WVE0 104 aa7.57□□□□□ -1.2
SNRNP48-203ENST00000634363 TRAV22A0A0B4J277 110 aa7.54□□□□□ -1.2
SNRNP48-203ENST00000634363 C4orf26Q17RF5 130 aa7.53□□□□□ -1.2
SNRNP48-203ENST00000634363 H1FX-AS1Q4G0G2 97 aa7.52□□□□□ -1.21
SNRNP48-203ENST00000634363 UQCRQO14949 82 aa7.51□□□□□ -1.21
SNRNP48-203ENST00000634363 K7ERU9 68 aa7.5□□□□□ -1.21
SNRNP48-203ENST00000634363 KRTAP19-6Q3LI70 58 aa7.5□□□□□ -1.21
SNRNP48-203ENST00000634363 MACF1Q9UPN3 7388 aaKnown RBP7.48□□□□□ -1.21
SNRNP48-203ENST00000634363 LOC100996750A0A140TA64 210 aa7.48□□□□□ -1.21
SNRNP48-203ENST00000634363 LOC101927531A0A1B0GV80 90 aa7.48□□□□□ -1.21
SNRNP48-203ENST00000634363 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
SNRNP48-203ENST00000634363 ATOX1O00244 68 aa7.47□□□□□ -1.21
SNRNP48-203ENST00000634363 H0Y9P7 68 aa7.46□□□□□ -1.22
SNRNP48-203ENST00000634363 CYP4F30PQ9H0H9 118 aa7.46□□□□□ -1.22
SNRNP48-203ENST00000634363 C1orf64Q8NEQ6 169 aa7.43□□□□□ -1.22
SNRNP48-203ENST00000634363 SYNE2Q8WXH0 6885 aaKnown RBP7.43□□□□□ -1.22
SNRNP48-203ENST00000634363 SCGB1A1P11684 91 aa7.4□□□□□ -1.22
SNRNP48-203ENST00000634363 OCR1Q9BZK8 76 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms